RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 UBC13P52490 153 aa2.27□□□□□ -2.05
snR78snR78 SWC4P53201 476 aa2.27□□□□□ -2.05
snR78snR78 PAN1P32521 1480 aa2.26□□□□□ -2.05
snR78snR78 NUP157P40064 1391 aaKnown RBP2.26□□□□□ -2.05
snR78snR78 DPM1P14020 267 aaKnown RBP2.26□□□□□ -2.05
snR78snR78 PDR16P53860 351 aaKnown RBP2.26□□□□□ -2.05
snR78snR78 FCF1Q05498 189 aaPredicted RBP2.26□□□□□ -2.05
snR78snR78 PBP4Q07362 185 aaKnown RBP2.26□□□□□ -2.05
snR78snR78 RTC5Q12108 567 aaKnown RBP2.26□□□□□ -2.05
snR78snR78 IZH4Q99393 312 aa2.26□□□□□ -2.05
snR78snR78 GAL3P13045 520 aa2.25□□□□□ -2.05
snR78snR78 CAJ1P39101 391 aa2.25□□□□□ -2.05
snR78snR78 RPE1P46969 238 aa2.25□□□□□ -2.05
snR78snR78 SLM2P53955 656 aa2.25□□□□□ -2.05
snR78snR78 CTS2Q06350 511 aa2.25□□□□□ -2.05
snR78snR78 YPL150WQ12152 901 aa2.25□□□□□ -2.05
snR78snR78 AVT7P40501 490 aa2.24□□□□□ -2.05
snR78snR78 RRP42Q12277 265 aaPredicted RBP2.24□□□□□ -2.05
snR78snR78 PSY3Q12318 242 aa2.24□□□□□ -2.05
snR78snR78 RAD7P06779 565 aa2.22□□□□□ -2.05
snR78snR78 YHR045WP38775 560 aa2.22□□□□□ -2.05
snR78snR78 YFR054CP43622 192 aa2.22□□□□□ -2.05
snR78snR78 DCR2Q05924 578 aa2.22□□□□□ -2.05
snR78snR78 TDH1P00360 332 aaKnown RBP2.21□□□□□ -2.06
snR78snR78 PHO89P38361 574 aa2.21□□□□□ -2.06
snR78snR78 YEL009C-AA0A023PZF2 135 aa2.2□□□□□ -2.06
snR78snR78 RPL31AP0C2H8 113 aaKnown RBP2.2□□□□□ -2.06
snR78snR78 AEP1P32493 518 aa2.2□□□□□ -2.06
snR78snR78 SEN34P39707 275 aa2.2□□□□□ -2.06
snR78snR78 STE23Q06010 1027 aa2.2□□□□□ -2.06
snR78snR78 YPR1Q12458 312 aa2.2□□□□□ -2.06
snR78snR78 YPR064WQ12492 139 aa2.2□□□□□ -2.06
snR78snR78 ISD11Q6Q560 94 aa2.2□□□□□ -2.06
snR78snR78 COT1P32798 439 aa2.19□□□□□ -2.06
snR78snR78 FCY21P40039 528 aa2.19□□□□□ -2.06
snR78snR78 MND1P53102 219 aa2.19□□□□□ -2.06
snR78snR78 COS6P53344 381 aa2.19□□□□□ -2.06
snR78snR78 GRE3P38715 327 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
snR78snR78 GDS1P41913 522 aa2.18□□□□□ -2.06
snR78snR78 TAZ1Q06510 381 aa2.18□□□□□ -2.06
snR78snR78 YOR268CQ08734 132 aa2.18□□□□□ -2.06
snR78snR78 EMC6Q12431 108 aa2.18□□□□□ -2.06
snR78snR78 RAD10P06838 210 aa2.17□□□□□ -2.06
snR78snR78 FET3P38993 636 aa2.17□□□□□ -2.06
snR78snR78 YJL027CP47063 138 aaPredicted RBP2.17□□□□□ -2.06
snR78snR78 ERG2P32352 222 aa2.16□□□□□ -2.06
snR78snR78 SMI1P32566 505 aa2.16□□□□□ -2.06
snR78snR78 POP8P38208 133 aa2.16□□□□□ -2.06
snR78snR78 COG3P40094 801 aa2.16□□□□□ -2.06
snR78snR78 SHQ1P40486 507 aaPredicted RBP2.16□□□□□ -2.06
snR78snR78 COG7P53195 279 aa2.16□□□□□ -2.06
snR78snR78 YOL019WQ08157 551 aa2.16□□□□□ -2.06
snR78snR78 APC9Q12107 265 aa2.16□□□□□ -2.06
snR78snR78 KRE6P32486 720 aa2.15□□□□□ -2.07
snR78snR78 CAT2P32796 670 aaKnown RBP2.15□□□□□ -2.07
snR78snR78 YPT32P51996 222 aaKnown RBP2.15□□□□□ -2.07
snR78snR78 DPP1Q05521 289 aa2.15□□□□□ -2.07
snR78snR78 PAA1Q12447 191 aaKnown RBP2.15□□□□□ -2.07
snR78snR78 TOM40P23644 387 aaKnown RBP2.14□□□□□ -2.07
snR78snR78 SWC5P38326 303 aa2.14□□□□□ -2.07
snR78snR78 AIM20P40451 204 aa2.14□□□□□ -2.07
snR78snR78 NAS2P40555 220 aa2.14□□□□□ -2.07
snR78snR78 MRPL49P40858 161 aaPredicted RBP2.14□□□□□ -2.07
snR78snR78 YPL039WQ03080 316 aa2.14□□□□□ -2.07
snR78snR78 YML018CQ03730 393 aa2.14□□□□□ -2.07
snR78snR78 CAB5Q03941 241 aa2.14□□□□□ -2.07
snR78snR78 SWD2P36104 329 aaPredicted RBP2.13□□□□□ -2.07
snR78snR78 YJL016WP47072 561 aa2.13□□□□□ -2.07
snR78snR78 YBL112CQ3E7Y4 105 aa2.13□□□□□ -2.07
snR78snR78 BMH1P29311 267 aaKnown RBP2.12□□□□□ -2.07
snR78snR78 RPS0AP32905 252 aaKnown RBP2.12□□□□□ -2.07
snR78snR78 END3P39013 349 aa2.12□□□□□ -2.07
snR78snR78 MPP10P47083 593 aaKnown RBP2.12□□□□□ -2.07
snR78snR78 YMR209CQ03648 457 aa2.12□□□□□ -2.07
snR78snR78 YMR111CQ04461 462 aaPredicted RBP2.12□□□□□ -2.07
snR78snR78 YOR114WQ12219 294 aa2.12□□□□□ -2.07
snR78snR78 CDC37P06101 506 aaKnown RBP2.11□□□□□ -2.07
snR78snR78 TFS1P14306 219 aa2.11□□□□□ -2.07
snR78snR78 YKL063CP35725 167 aa2.11□□□□□ -2.07
snR78snR78 UIP5P36137 443 aa2.11□□□□□ -2.07
snR78snR78 LSM4P40070 187 aaKnown RBP2.11□□□□□ -2.07
snR78snR78 COX16P47081 118 aa2.11□□□□□ -2.07
snR78snR78 EBS1Q03466 884 aaKnown RBP2.11□□□□□ -2.07
snR78snR78 MSS116P15424 664 aaKnown RBP2.1□□□□□ -2.07
snR78snR78 YOR062CP36025 268 aa2.1□□□□□ -2.07
snR78snR78 YHL026CP38740 315 aa2.1□□□□□ -2.07
snR78snR78 SPT8P38915 602 aa2.1□□□□□ -2.07
snR78snR78 CAB4P53332 305 aa2.1□□□□□ -2.07
snR78snR78 ECM18Q04623 453 aa2.1□□□□□ -2.07
snR78snR78 ATG15P25641 520 aa2.09□□□□□ -2.07
snR78snR78 SUA5P32579 426 aa2.09□□□□□ -2.07
snR78snR78 YHI9P38765 294 aa2.09□□□□□ -2.07
snR78snR78 GON7P46984 123 aa2.09□□□□□ -2.07
snR78snR78 NOT5Q12514 560 aaPredicted RBP2.09□□□□□ -2.07
snR78snR78 YCR102CP25608 368 aa2.08□□□□□ -2.08
snR78snR78 SPT4P32914 102 aaPredicted RBP2.08□□□□□ -2.08
snR78snR78 RPC37P36121 282 aa2.08□□□□□ -2.08
snR78snR78 YPL077CQ02831 240 aa2.08□□□□□ -2.08
snR78snR78 YMR114CQ04471 368 aaKnown RBP2.08□□□□□ -2.08
snR78snR78 CAR2P07991 424 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms