RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C ICL1P28240 557 aaPredicted RBP0.79□□□□□ -2.28
NIP100YPL174C CAT2P32796 670 aaKnown RBP0.79□□□□□ -2.28
NIP100YPL174C CLB6P32943 380 aa0.79□□□□□ -2.28
NIP100YPL174C YBR062CP38239 180 aa0.79□□□□□ -2.28
NIP100YPL174C YPC1P38298 316 aa0.79□□□□□ -2.28
NIP100YPL174C FET3P38993 636 aa0.79□□□□□ -2.28
NIP100YPL174C PIR5P46999 287 aa0.79□□□□□ -2.28
NIP100YPL174C TVP15Q03860 143 aa0.79□□□□□ -2.28
NIP100YPL174C MYO5Q04439 1219 aaKnown RBP0.79□□□□□ -2.28
NIP100YPL174C YHR086W-AQ3E746 53 aa0.79□□□□□ -2.28
NIP100YPL174C ISD11Q6Q560 94 aa0.79□□□□□ -2.28
NIP100YPL174C CDC37P06101 506 aaKnown RBP0.78□□□□□ -2.28
NIP100YPL174C VPH2P32341 215 aa0.78□□□□□ -2.28
NIP100YPL174C NBP1P52919 319 aaPredicted RBP0.78□□□□□ -2.28
NIP100YPL174C SLM2P53955 656 aa0.78□□□□□ -2.28
NIP100YPL174C DPP1Q05521 289 aa0.78□□□□□ -2.28
NIP100YPL174C POT1P27796 417 aaKnown RBP RIP-Chip data0.78□□□□□ -2.29not detected
NIP100YPL174C COT1P32798 439 aa0.78□□□□□ -2.29
NIP100YPL174C RPS0AP32905 252 aaKnown RBP0.78□□□□□ -2.29
NIP100YPL174C AVT7P40501 490 aa0.78□□□□□ -2.29
NIP100YPL174C INA22P40576 216 aa0.78□□□□□ -2.29
NIP100YPL174C COX16P47081 118 aa0.78□□□□□ -2.29
NIP100YPL174C CAB5Q03941 241 aa0.78□□□□□ -2.29
NIP100YPL174C YAL063C-AQ3E791 96 aa0.78□□□□□ -2.29
NIP100YPL174C ILV1P00927 576 aaKnown RBP0.77□□□□□ -2.29
NIP100YPL174C YCR025CP25352 136 aa0.77□□□□□ -2.29
NIP100YPL174C BMH1P29311 267 aaKnown RBP0.77□□□□□ -2.29
NIP100YPL174C CAM1P29547 415 aaKnown RBP0.77□□□□□ -2.29
NIP100YPL174C ERG2P32352 222 aa0.77□□□□□ -2.29
NIP100YPL174C SWC5P38326 303 aa0.77□□□□□ -2.29
NIP100YPL174C OKP1P53298 406 aa0.77□□□□□ -2.29
NIP100YPL174C YDL144CQ07589 356 aa0.77□□□□□ -2.29
NIP100YPL174C HIS3P06633 220 aa0.77□□□□□ -2.29
NIP100YPL174C CAR2P07991 424 aaKnown RBP0.77□□□□□ -2.29
NIP100YPL174C TRX1P22217 103 aaKnown RBP0.77□□□□□ -2.29
NIP100YPL174C SCO1P23833 295 aa0.77□□□□□ -2.29
NIP100YPL174C YKL162CP36052 402 aa0.77□□□□□ -2.29
NIP100YPL174C NRG2P38082 220 aa0.77□□□□□ -2.29
NIP100YPL174C SPT8P38915 602 aa0.77□□□□□ -2.29
NIP100YPL174C YMR111CQ04461 462 aaPredicted RBP0.77□□□□□ -2.29
NIP100YPL174C ASR1Q06834 288 aa0.77□□□□□ -2.29
NIP100YPL174C YOL019WQ08157 551 aa0.77□□□□□ -2.29
NIP100YPL174C SLD7Q08457 257 aa0.77□□□□□ -2.29
NIP100YPL174C APC9Q12107 265 aa0.77□□□□□ -2.29
NIP100YPL174C CSM1P25651 190 aa0.76□□□□□ -2.29
NIP100YPL174C IMP3P32899 183 aaPredicted RBP0.76□□□□□ -2.29
NIP100YPL174C YKL063CP35725 167 aa0.76□□□□□ -2.29
NIP100YPL174C MCH2P36032 473 aa0.76□□□□□ -2.29
NIP100YPL174C APE4P38821 490 aa0.76□□□□□ -2.29
NIP100YPL174C LIN1P38852 340 aaPredicted RBP0.76□□□□□ -2.29
NIP100YPL174C SUR2P38992 349 aa0.76□□□□□ -2.29
NIP100YPL174C RPL10P41805 221 aaKnown RBP0.76□□□□□ -2.29
NIP100YPL174C UBC13P52490 153 aa0.76□□□□□ -2.29
NIP100YPL174C PSY3Q12318 242 aa0.76□□□□□ -2.29
NIP100YPL174C PST1Q12355 444 aa0.76□□□□□ -2.29
NIP100YPL174C STF1P01098 86 aa0.76□□□□□ -2.29
NIP100YPL174C RAD10P06838 210 aa0.76□□□□□ -2.29
NIP100YPL174C YHR045WP38775 560 aa0.76□□□□□ -2.29
NIP100YPL174C TPN1P53099 579 aa0.76□□□□□ -2.29
NIP100YPL174C FKS1P38631 1876 aaKnown RBP0.76□□□□□ -2.29
NIP100YPL174C RAD3P06839 778 aa0.75□□□□□ -2.29
NIP100YPL174C SPT4P32914 102 aaPredicted RBP0.75□□□□□ -2.29
NIP100YPL174C PCL7P40186 285 aa0.75□□□□□ -2.29
NIP100YPL174C AIM20P40451 204 aa0.75□□□□□ -2.29
NIP100YPL174C DAN1P47178 298 aa0.75□□□□□ -2.29
NIP100YPL174C YML018CQ03730 393 aa0.75□□□□□ -2.29
NIP100YPL174C SIA1Q12212 622 aa0.75□□□□□ -2.29
NIP100YPL174C RPL31AP0C2H8 113 aaKnown RBP0.75□□□□□ -2.29
NIP100YPL174C SAR1P20606 190 aaKnown RBP0.75□□□□□ -2.29
NIP100YPL174C RPL5P26321 297 aaKnown RBP0.75□□□□□ -2.29
NIP100YPL174C CAJ1P39101 391 aa0.75□□□□□ -2.29
NIP100YPL174C TAD2P47058 250 aa0.75□□□□□ -2.29
NIP100YPL174C NIF3P53081 288 aa0.75□□□□□ -2.29
NIP100YPL174C VOA1P53262 265 aa0.75□□□□□ -2.29
NIP100YPL174C TAF9Q05027 157 aa0.75□□□□□ -2.29
NIP100YPL174C MAL32P38158 584 aa0.74□□□□□ -2.29
NIP100YPL174C POP8P38208 133 aa0.74□□□□□ -2.29
NIP100YPL174C VAB2P40003 282 aa0.74□□□□□ -2.29
NIP100YPL174C MAL12P53341 584 aa0.74□□□□□ -2.29
NIP100YPL174C TAZ1Q06510 381 aa0.74□□□□□ -2.29
NIP100YPL174C GPN3Q06543 272 aa0.74□□□□□ -2.29
NIP100YPL174C ZWF1P11412 505 aaKnown RBP0.74□□□□□ -2.29
NIP100YPL174C LSM4P40070 187 aaKnown RBP0.74□□□□□ -2.29
NIP100YPL174C GON7P46984 123 aa0.74□□□□□ -2.29
NIP100YPL174C MSS116P15424 664 aaKnown RBP0.73□□□□□ -2.29
NIP100YPL174C SUA5P32579 426 aa0.73□□□□□ -2.29
NIP100YPL174C RPC37P36121 282 aa0.73□□□□□ -2.29
NIP100YPL174C YHL026CP38740 315 aa0.73□□□□□ -2.29
NIP100YPL174C SSO2P39926 295 aa0.73□□□□□ -2.29
NIP100YPL174C GDS1P41913 522 aa0.73□□□□□ -2.29
NIP100YPL174C LOH1P47055 219 aa0.73□□□□□ -2.29
NIP100YPL174C CGI121Q03705 181 aaKnown RBP0.73□□□□□ -2.29
NIP100YPL174C RPL26AP05743 127 aaKnown RBP0.73□□□□□ -2.29
NIP100YPL174C ADH3P07246 375 aaKnown RBP0.73□□□□□ -2.29
NIP100YPL174C DPB2P24482 689 aaPredicted RBP0.73□□□□□ -2.29
NIP100YPL174C PET18P25362 215 aa0.73□□□□□ -2.29
NIP100YPL174C RNP1P32385 249 aa0.73□□□□□ -2.29
NIP100YPL174C RPL26BP53221 127 aaKnown RBP0.73□□□□□ -2.29
NIP100YPL174C YPL077CQ02831 240 aa0.73□□□□□ -2.29
NIP100YPL174C YPL039WQ03080 316 aa0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms