RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C ATG5Q12380 294 aa4.14□□□□□ -1.75
GDE1YPL110C TFC7Q12415 435 aa4.14□□□□□ -1.75
GDE1YPL110C MOT1P32333 1867 aa4.14□□□□□ -1.75
GDE1YPL110C SGA1P08019 549 aa4.14□□□□□ -1.75
GDE1YPL110C EPT1P22140 391 aa4.14□□□□□ -1.75
GDE1YPL110C SNC1P31109 117 aa4.14□□□□□ -1.75
GDE1YPL110C MET22P32179 357 aa4.14□□□□□ -1.75
GDE1YPL110C FLR1P38124 548 aa4.14□□□□□ -1.75
GDE1YPL110C POG1P40473 351 aa4.14□□□□□ -1.75
GDE1YPL110C GLC8P41818 229 aa4.14□□□□□ -1.75
GDE1YPL110C MAF1P41910 395 aa4.14□□□□□ -1.75
GDE1YPL110C YJL171CP46992 396 aa4.14□□□□□ -1.75
GDE1YPL110C EFM3P47163 339 aa4.14□□□□□ -1.75
GDE1YPL110C TRM9P49957 279 aa4.14□□□□□ -1.75
GDE1YPL110C RIM8P53179 542 aa4.14□□□□□ -1.75
GDE1YPL110C CGI121Q03705 181 aaKnown RBP4.14□□□□□ -1.75
GDE1YPL110C CTK1Q03957 528 aaKnown RBP4.14□□□□□ -1.75
GDE1YPL110C SEC13Q04491 297 aaKnown RBP4.14□□□□□ -1.75
GDE1YPL110C RRP45Q05636 305 aaKnown RBP4.14□□□□□ -1.75
GDE1YPL110C EST2Q06163 884 aa4.14□□□□□ -1.75
GDE1YPL110C FOL3Q12676 427 aaPredicted RBP4.14□□□□□ -1.75
GDE1YPL110C YLR099W-AQ3E798 87 aa4.14□□□□□ -1.75
GDE1YPL110C VMA9Q3E7B6 73 aa4.14□□□□□ -1.75
GDE1YPL110C ALG7P07286 448 aa4.13□□□□□ -1.75
GDE1YPL110C YPR170W-BP0C5R9 85 aa4.13□□□□□ -1.75
GDE1YPL110C ASP3-2P0CX77 362 aa4.13□□□□□ -1.75
GDE1YPL110C ASP3-3P0CX78 362 aa4.13□□□□□ -1.75
GDE1YPL110C ASP3-4P0CX79 362 aa4.13□□□□□ -1.75
GDE1YPL110C ASP3-1P0CZ17 362 aa4.13□□□□□ -1.75
GDE1YPL110C ADH7P25377 361 aa4.13□□□□□ -1.75
GDE1YPL110C YKL075CP36083 450 aa4.13□□□□□ -1.75
GDE1YPL110C APT2P36973 181 aa4.13□□□□□ -1.75
GDE1YPL110C YPT35P38815 214 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C YCK3P39962 524 aa4.13□□□□□ -1.75
GDE1YPL110C SWM2P40342 146 aa4.13□□□□□ -1.75
GDE1YPL110C YCH1P42937 148 aa4.13□□□□□ -1.75
GDE1YPL110C YFL064CP43540 174 aa4.13□□□□□ -1.75
GDE1YPL110C DPB11P47027 764 aaPredicted RBP4.13□□□□□ -1.75
GDE1YPL110C PHO23P50947 330 aa4.13□□□□□ -1.75
GDE1YPL110C AQR1P53943 586 aa4.13□□□□□ -1.75
GDE1YPL110C YPL077CQ02831 240 aa4.13□□□□□ -1.75
GDE1YPL110C RIM13Q03792 727 aa4.13□□□□□ -1.75
GDE1YPL110C TMN2Q04562 672 aa4.13□□□□□ -1.75
GDE1YPL110C YPL245WQ12179 454 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C WTM1Q12363 437 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C TRM10Q12400 293 aa4.13□□□□□ -1.75
GDE1YPL110C COX5BP00425 151 aa4.13□□□□□ -1.75
GDE1YPL110C YPT1P01123 206 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C MDH1P17505 334 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
GDE1YPL110C RPB5P20434 215 aa4.13□□□□□ -1.75
GDE1YPL110C MSK1P32048 576 aa4.13□□□□□ -1.75
GDE1YPL110C NUD1P32336 851 aa4.13□□□□□ -1.75
GDE1YPL110C YOR062CP36025 268 aa4.13□□□□□ -1.75
GDE1YPL110C GMH1P36125 273 aa4.13□□□□□ -1.75
GDE1YPL110C YHR127WP38833 243 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C CRG1P38892 291 aaRIP-Chip data4.13□□□□□ -1.75not detected
GDE1YPL110C GAT2P40209 560 aa4.13□□□□□ -1.75
GDE1YPL110C IME4P41833 600 aa4.13□□□□□ -1.75
GDE1YPL110C CLD1P53264 445 aa4.13□□□□□ -1.75
GDE1YPL110C DIG1Q03063 452 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C YMR160WQ03823 816 aa4.13□□□□□ -1.75
GDE1YPL110C CUR1Q06469 252 aa4.13□□□□□ -1.75
GDE1YPL110C RAD34Q06665 692 aa4.13□□□□□ -1.75
GDE1YPL110C RDL1Q12305 139 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C PST1Q12355 444 aa4.13□□□□□ -1.75
GDE1YPL110C TDH2P00358 332 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C TDH3P00359 332 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
GDE1YPL110C RPP1BP10622 106 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C TIR1P10863 254 aa4.13□□□□□ -1.75
GDE1YPL110C URK1P27515 501 aa4.13□□□□□ -1.75
GDE1YPL110C TIP20P33891 701 aa4.13□□□□□ -1.75
GDE1YPL110C ZRT3P34240 503 aa4.13□□□□□ -1.75
GDE1YPL110C END3P39013 349 aa4.13□□□□□ -1.75
GDE1YPL110C YEA6P39953 335 aa4.13□□□□□ -1.75
GDE1YPL110C FIR1P40020 876 aa4.13□□□□□ -1.75
GDE1YPL110C GLR1P41921 483 aaKnown RBP4.13□□□□□ -1.75
GDE1YPL110C SPG5P42933 373 aa4.13□□□□□ -1.75
GDE1YPL110C SFH5P47008 294 aa4.13□□□□□ -1.75
GDE1YPL110C HST3P53687 447 aa4.13□□□□□ -1.75
GDE1YPL110C YDR366CP87287 132 aa4.13□□□□□ -1.75
GDE1YPL110C KIN4Q01919 800 aa4.13□□□□□ -1.75
GDE1YPL110C ELC1Q03071 99 aa4.13□□□□□ -1.75
GDE1YPL110C AIM34Q03673 198 aa4.13□□□□□ -1.75
GDE1YPL110C JLP1Q12358 412 aa4.13□□□□□ -1.75
GDE1YPL110C YCR075W-AQ3E830 75 aa4.13□□□□□ -1.75
GDE1YPL110C Q0142Q9ZZW4 58 aa4.13□□□□□ -1.75
GDE1YPL110C VPS63O13549 108 aa4.12□□□□□ -1.75
GDE1YPL110C CDC4P07834 779 aa4.12□□□□□ -1.75
GDE1YPL110C PRP18P33411 251 aaPredicted RBP4.12□□□□□ -1.75
GDE1YPL110C YER188WP40103 239 aa4.12□□□□□ -1.75
GDE1YPL110C GTS1P40956 396 aa4.12□□□□□ -1.75
GDE1YPL110C GMC1Q04399 608 aa4.12□□□□□ -1.75
GDE1YPL110C YTH1Q06102 208 aaPredicted RBP4.12□□□□□ -1.75
GDE1YPL110C SKG3Q06315 1026 aa4.12□□□□□ -1.75
GDE1YPL110C UPC2Q12151 913 aa4.12□□□□□ -1.75
GDE1YPL110C STE18P18852 110 aa4.12□□□□□ -1.75
GDE1YPL110C MEK1P24719 497 aaPredicted RBP4.12□□□□□ -1.75
GDE1YPL110C STP22P25604 385 aa4.12□□□□□ -1.75
GDE1YPL110C PRP45P28004 379 aaPredicted RBP4.12□□□□□ -1.75
GDE1YPL110C PMU1P36069 295 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms