RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W PEX3P28795 441 aa3.11□□□□□ -1.91
HSH49YOR319W IES6P32617 166 aa3.11□□□□□ -1.91
HSH49YOR319W TIP20P33891 701 aa3.11□□□□□ -1.91
HSH49YOR319W GPX1P36014 167 aa3.11□□□□□ -1.91
HSH49YOR319W MRX3P38172 270 aa3.11□□□□□ -1.91
HSH49YOR319W GGC1P38988 300 aa3.11□□□□□ -1.91
HSH49YOR319W MSS2P40990 351 aa3.11□□□□□ -1.91
HSH49YOR319W OTU1P43558 301 aa3.11□□□□□ -1.91
HSH49YOR319W RMI1Q02685 241 aa3.11□□□□□ -1.91
HSH49YOR319W INP2Q03824 705 aa3.11□□□□□ -1.91
HSH49YOR319W SEC13Q04491 297 aaKnown RBP3.11□□□□□ -1.91
HSH49YOR319W CSM4Q08955 156 aa3.11□□□□□ -1.91
HSH49YOR319W SME1Q12330 94 aaPredicted RBP3.11□□□□□ -1.91
HSH49YOR319W STH1P32597 1359 aa3.11□□□□□ -1.91
HSH49YOR319W TDH2P00358 332 aaKnown RBP3.1□□□□□ -1.91
HSH49YOR319W COX4P04037 155 aa3.1□□□□□ -1.91
HSH49YOR319W PET494P07390 489 aaPredicted RBP3.1□□□□□ -1.91
HSH49YOR319W DAL81P21657 970 aa3.1□□□□□ -1.91
HSH49YOR319W RNA15P25299 296 aaPredicted RBP3.1□□□□□ -1.91
HSH49YOR319W VPH2P32341 215 aa3.1□□□□□ -1.91
HSH49YOR319W CDC13P32797 924 aaKnown RBP3.1□□□□□ -1.91
HSH49YOR319W YKT6P36015 200 aaKnown RBP3.1□□□□□ -1.91
HSH49YOR319W RFT1P38206 574 aaPredicted RBP3.1□□□□□ -1.91
HSH49YOR319W GPI18P38211 433 aa3.1□□□□□ -1.91
HSH49YOR319W RPL10P41805 221 aaKnown RBP3.1□□□□□ -1.91
HSH49YOR319W YJR012CP47087 207 aa3.1□□□□□ -1.91
HSH49YOR319W PEX31P53203 462 aa3.1□□□□□ -1.91
HSH49YOR319W CDC14Q00684 551 aa3.1□□□□□ -1.91
HSH49YOR319W YDR209CQ03480 137 aa3.1□□□□□ -1.91
HSH49YOR319W MYO5Q04439 1219 aaKnown RBP3.1□□□□□ -1.91
HSH49YOR319W PAL1Q05518 499 aaKnown RBP3.1□□□□□ -1.91
HSH49YOR319W SEC10Q06245 871 aa3.1□□□□□ -1.91
HSH49YOR319W YOR292CQ08743 309 aa3.1□□□□□ -1.91
HSH49YOR319W YDR018CQ12185 396 aa3.1□□□□□ -1.91
HSH49YOR319W FOL3Q12676 427 aaPredicted RBP3.1□□□□□ -1.91
HSH49YOR319W YOS9Q99220 542 aa3.1□□□□□ -1.91
HSH49YOR319W YAL064W-BO13512 126 aa3.09□□□□□ -1.91
HSH49YOR319W RPP0P05317 312 aaKnown RBP3.09□□□□□ -1.91
HSH49YOR319W VPS3P23643 1011 aa3.09□□□□□ -1.91
HSH49YOR319W TPS2P31688 896 aaKnown RBP3.09□□□□□ -1.91
HSH49YOR319W SPS19P32573 292 aaKnown RBP3.09□□□□□ -1.91
HSH49YOR319W YEL045CP32616 141 aa3.09□□□□□ -1.91
HSH49YOR319W AIM29P36154 155 aa3.09□□□□□ -1.91
HSH49YOR319W YBR062CP38239 180 aa3.09□□□□□ -1.91
HSH49YOR319W YGL039WP53183 348 aaKnown RBP3.09□□□□□ -1.91
HSH49YOR319W COG7P53195 279 aa3.09□□□□□ -1.91
HSH49YOR319W PGA2P53903 129 aa3.09□□□□□ -1.91
HSH49YOR319W RPL21AQ02753 160 aaKnown RBP3.09□□□□□ -1.91
HSH49YOR319W VPS60Q03390 229 aa3.09□□□□□ -1.91
HSH49YOR319W VHS1Q03785 461 aa3.09□□□□□ -1.91
HSH49YOR319W API2Q04413 109 aa3.09□□□□□ -1.91
HSH49YOR319W EPT1P22140 391 aa3.08□□□□□ -1.92
HSH49YOR319W DOA4P32571 926 aa3.08□□□□□ -1.92
HSH49YOR319W LDB7P38210 180 aa3.08□□□□□ -1.92
HSH49YOR319W MBA1P38300 278 aa3.08□□□□□ -1.92
HSH49YOR319W ATG12P38316 186 aa3.08□□□□□ -1.92
HSH49YOR319W DSN1P40568 576 aa3.08□□□□□ -1.92
HSH49YOR319W YPS5P53057 165 aa3.08□□□□□ -1.92
HSH49YOR319W LIF1P53150 421 aa3.08□□□□□ -1.92
HSH49YOR319W MAL13P53338 473 aa3.08□□□□□ -1.92
HSH49YOR319W TRM10Q12400 293 aa3.08□□□□□ -1.92
HSH49YOR319W ADF1Q2V2Q1 113 aa3.08□□□□□ -1.92
HSH49YOR319W MATALPHA1P0CY06 175 aa3.07□□□□□ -1.92
HSH49YOR319W HMLALPHA1P0CY07 175 aa3.07□□□□□ -1.92
HSH49YOR319W RPS5P26783 225 aaKnown RBP3.07□□□□□ -1.92
HSH49YOR319W ALK2P32789 676 aaPredicted RBP3.07□□□□□ -1.92
HSH49YOR319W MRPL27P36526 146 aaPredicted RBP3.07□□□□□ -1.92
HSH49YOR319W FRM2P37261 193 aa3.07□□□□□ -1.92
HSH49YOR319W RRG9P40156 214 aa3.07□□□□□ -1.92
HSH49YOR319W NBP1P52919 319 aaPredicted RBP3.07□□□□□ -1.92
HSH49YOR319W CGR1P53188 120 aa3.07□□□□□ -1.92
HSH49YOR319W FMP48P53233 369 aa3.07□□□□□ -1.92
HSH49YOR319W NOP13P53883 403 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
HSH49YOR319W RPO26P20435 155 aa3.06□□□□□ -1.92
HSH49YOR319W RPL24BP24000 155 aaKnown RBP3.06□□□□□ -1.92
HSH49YOR319W MRPL3P36516 390 aa3.06□□□□□ -1.92
HSH49YOR319W KRE29P40026 464 aa3.06□□□□□ -1.92
HSH49YOR319W YFL064CP43540 174 aa3.06□□□□□ -1.92
HSH49YOR319W MIC19P43594 170 aa3.06□□□□□ -1.92
HSH49YOR319W HOC1P47124 396 aa3.06□□□□□ -1.92
HSH49YOR319W SWS2P53937 143 aa3.06□□□□□ -1.92
HSH49YOR319W MRPS16Q02608 121 aa3.06□□□□□ -1.92
HSH49YOR319W EBS1Q03466 884 aaKnown RBP3.06□□□□□ -1.92
HSH49YOR319W GTO3Q04806 366 aa3.06□□□□□ -1.92
HSH49YOR319W MHR1Q06630 226 aa3.06□□□□□ -1.92
HSH49YOR319W ARG80P07249 177 aa3.05□□□□□ -1.92
HSH49YOR319W ATG15P25641 520 aa3.05□□□□□ -1.92
HSH49YOR319W PPA2P28239 310 aa3.05□□□□□ -1.92
HSH49YOR319W HOM6P31116 359 aaKnown RBP3.05□□□□□ -1.92
HSH49YOR319W QRI5P32344 111 aa3.05□□□□□ -1.92
HSH49YOR319W SMP1P38128 452 aa3.05□□□□□ -1.92
HSH49YOR319W MRP21P38175 177 aa3.05□□□□□ -1.92
HSH49YOR319W MED8P38304 223 aa3.05□□□□□ -1.92
HSH49YOR319W ECM34P38728 170 aa3.05□□□□□ -1.92
HSH49YOR319W SEN34P39707 275 aa3.05□□□□□ -1.92
HSH49YOR319W YER184CP39961 794 aa3.05□□□□□ -1.92
HSH49YOR319W SMB1P40018 196 aaKnown RBP3.05□□□□□ -1.92
HSH49YOR319W THO1P40040 218 aaKnown RBP3.05□□□□□ -1.92
HSH49YOR319W PRE5P40302 234 aaKnown RBP3.05□□□□□ -1.92
HSH49YOR319W SER33P40510 469 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 84 ms