RNA–Protein interactions for RNA: YMR091C

NPL6, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene NPL6, Length 1,308 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL6	YMR091C	SPS19	P32573	292 aa	Known RBP	4.96	□□□□□ -1.62
NPL6	YMR091C	BMH2	P34730	273 aa	Known RBP	4.96	□□□□□ -1.62
NPL6	YMR091C	GPX1	P36014	167 aa		4.96	□□□□□ -1.62
NPL6	YMR091C	YBR062C	P38239	180 aa		4.96	□□□□□ -1.62
NPL6	YMR091C	ALD5	P40047	520 aa	Known RBP	4.96	□□□□□ -1.62
NPL6	YMR091C	RTR1	P40084	226 aa	Predicted RBP	4.96	□□□□□ -1.62
NPL6	YMR091C	YJR012C	P47087	207 aa		4.96	□□□□□ -1.62
NPL6	YMR091C	IBA57	P47158	497 aa		4.96	□□□□□ -1.62
NPL6	YMR091C	VEL1	P53058	206 aa		4.96	□□□□□ -1.62
NPL6	YMR091C	YGL039W	P53183	348 aa	Known RBP	4.96	□□□□□ -1.62
NPL6	YMR091C	YDR209C	Q03480	137 aa		4.96	□□□□□ -1.62
NPL6	YMR091C	API2	Q04413	109 aa		4.96	□□□□□ -1.62
NPL6	YMR091C	SEC13	Q04491	297 aa	Known RBP	4.96	□□□□□ -1.62
NPL6	YMR091C	MSH5	Q12175	901 aa		4.96	□□□□□ -1.62
NPL6	YMR091C	RPS3	P05750	240 aa	Known RBP	4.95	□□□□□ -1.62
NPL6	YMR091C	DAL81	P21657	970 aa		4.95	□□□□□ -1.62
NPL6	YMR091C	KRE6	P32486	720 aa		4.95	□□□□□ -1.62
NPL6	YMR091C	DED81	P38707	554 aa	Known RBP	4.95	□□□□□ -1.62
NPL6	YMR091C	FMP48	P53233	369 aa		4.95	□□□□□ -1.62
NPL6	YMR091C	YLR283W	Q05867	314 aa		4.95	□□□□□ -1.62
NPL6	YMR091C	TIP20	P33891	701 aa		4.94	□□□□□ -1.62
NPL6	YMR091C	YPS5	P53057	165 aa		4.94	□□□□□ -1.62
NPL6	YMR091C	COG7	P53195	279 aa		4.94	□□□□□ -1.62
NPL6	YMR091C	RNY1	Q02933	434 aa	Known RBP	4.94	□□□□□ -1.62
NPL6	YMR091C	KRE28	Q04431	385 aa		4.94	□□□□□ -1.62
NPL6	YMR091C	SEC10	Q06245	871 aa		4.94	□□□□□ -1.62
NPL6	YMR091C	SME1	Q12330	94 aa	Predicted RBP	4.94	□□□□□ -1.62
NPL6	YMR091C	PET494	P07390	489 aa	Predicted RBP	4.93	□□□□□ -1.62
NPL6	YMR091C	REV1	P12689	985 aa		4.93	□□□□□ -1.62
NPL6	YMR091C	RPB4	P20433	221 aa	Predicted RBP	4.93	□□□□□ -1.62
NPL6	YMR091C	MRPS16	Q02608	121 aa		4.93	□□□□□ -1.62
NPL6	YMR091C	VPS60	Q03390	229 aa		4.93	□□□□□ -1.62
NPL6	YMR091C	INP1	Q03694	420 aa		4.93	□□□□□ -1.62
NPL6	YMR091C	VHS1	Q03785	461 aa		4.93	□□□□□ -1.62
NPL6	YMR091C	YDR018C	Q12185	396 aa		4.93	□□□□□ -1.62
NPL6	YMR091C	TDH2	P00358	332 aa	Known RBP	4.92	□□□□□ -1.62
NPL6	YMR091C	RNA15	P25299	296 aa	Predicted RBP	4.92	□□□□□ -1.62
NPL6	YMR091C	PEX3	P28795	441 aa		4.92	□□□□□ -1.62
NPL6	YMR091C	TPS2	P31688	896 aa	Known RBP	4.92	□□□□□ -1.62
NPL6	YMR091C	MRX3	P38172	270 aa		4.92	□□□□□ -1.62
NPL6	YMR091C	NBP1	P52919	319 aa	Predicted RBP	4.92	□□□□□ -1.62
NPL6	YMR091C	YGL262W	P53054	175 aa		4.92	□□□□□ -1.62
NPL6	YMR091C	MYO5	Q04439	1219 aa	Known RBP	4.92	□□□□□ -1.62
NPL6	YMR091C	SCW10	Q04951	389 aa		4.92	□□□□□ -1.62
NPL6	YMR091C	MCH1	Q07376	486 aa		4.92	□□□□□ -1.62
NPL6	YMR091C	TMC1	Q08422	150 aa	Predicted RBP	4.92	□□□□□ -1.62
NPL6	YMR091C	YPL278C	Q08990	100 aa		4.92	□□□□□ -1.62
NPL6	YMR091C	YOS9	Q99220	542 aa		4.92	□□□□□ -1.62
NPL6	YMR091C	YAL064W-B	O13512	126 aa		4.91	□□□□□ -1.62
NPL6	YMR091C	RPP0	P05317	312 aa	Known RBP	4.91	□□□□□ -1.62
NPL6	YMR091C	DOA4	P32571	926 aa		4.91	□□□□□ -1.62
NPL6	YMR091C	MRPL27	P36526	146 aa	Predicted RBP	4.91	□□□□□ -1.62
NPL6	YMR091C	SMP1	P38128	452 aa		4.91	□□□□□ -1.62
NPL6	YMR091C	ATG12	P38316	186 aa		4.91	□□□□□ -1.62
NPL6	YMR091C	KRE29	P40026	464 aa		4.91	□□□□□ -1.62
NPL6	YMR091C	MSS2	P40990	351 aa		4.91	□□□□□ -1.62
NPL6	YMR091C	MAL13	P53338	473 aa		4.91	□□□□□ -1.62
NPL6	YMR091C	MHR1	Q06630	226 aa		4.91	□□□□□ -1.62
NPL6	YMR091C	STH1	P32597	1359 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	ALK2	P32789	676 aa	Predicted RBP	4.9	□□□□□ -1.63
NPL6	YMR091C	YKT6	P36015	200 aa	Known RBP	4.9	□□□□□ -1.63
NPL6	YMR091C	FRM2	P37261	193 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	LDB7	P38210	180 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	MBA1	P38300	278 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	ECM34	P38728	170 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	RRT13	P40042	185 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	PRE5	P40302	234 aa	Known RBP	4.9	□□□□□ -1.63
NPL6	YMR091C	OTU1	P43558	301 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	UTP15	Q04305	513 aa	Known RBP	4.9	□□□□□ -1.63
NPL6	YMR091C	YOL029C	Q08187	201 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	TRM10	Q12400	293 aa		4.9	□□□□□ -1.63
NPL6	YMR091C	PSK1	P31374	1356 aa		4.89	□□□□□ -1.63
NPL6	YMR091C	AIM29	P36154	155 aa		4.89	□□□□□ -1.63
NPL6	YMR091C	MRPL3	P36516	390 aa		4.89	□□□□□ -1.63
NPL6	YMR091C	MRP21	P38175	177 aa		4.89	□□□□□ -1.63
NPL6	YMR091C	YFL064C	P43540	174 aa		4.89	□□□□□ -1.63
NPL6	YMR091C	MIC19	P43594	170 aa		4.89	□□□□□ -1.63
NPL6	YMR091C	EBS1	Q03466	884 aa	Known RBP	4.89	□□□□□ -1.63
NPL6	YMR091C	ARC18	Q05933	178 aa	Known RBP	4.89	□□□□□ -1.63
NPL6	YMR091C	CSM4	Q08955	156 aa		4.89	□□□□□ -1.63
NPL6	YMR091C	YMR316C-A	I2HB70	103 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	MATALPHA1	P0CY06	175 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	HMLALPHA1	P0CY07	175 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	VPS3	P23643	1011 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	IMP1	P28627	190 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	VPH2	P32341	215 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	QRI5	P32344	111 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	SEN34	P39707	275 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	RRG9	P40156	214 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	PGU1	P47180	361 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	PRP24	P49960	444 aa	Known RBP	4.88	□□□□□ -1.63
NPL6	YMR091C	PGA2	P53903	129 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	YLR152C	P54072	576 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	HAL1	Q01766	294 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	YMR244W	Q04018	355 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	RAX2	Q12465	1220 aa		4.88	□□□□□ -1.63
NPL6	YMR091C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
NPL6	YMR091C	PCL1	P24867	279 aa		4.87	□□□□□ -1.63
NPL6	YMR091C	ZRT3	P34240	503 aa		4.87	□□□□□ -1.63
NPL6	YMR091C	AVT7	P40501	490 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms