RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS9	YML097C	ADD37	Q03233	198 aa		2.68	□□□□□ -1.98
VPS9	YML097C	GTO3	Q04806	366 aa		2.68	□□□□□ -1.98
VPS9	YML097C	TAF9	Q05027	157 aa		2.68	□□□□□ -1.98
VPS9	YML097C	YOR292C	Q08743	309 aa		2.68	□□□□□ -1.98
VPS9	YML097C	HRT3	Q12347	344 aa		2.68	□□□□□ -1.98
VPS9	YML097C	SNF8	Q12483	233 aa		2.68	□□□□□ -1.98
VPS9	YML097C	RPP0	P05317	312 aa	Known RBP	2.67	□□□□□ -1.98
VPS9	YML097C	RPS3	P05750	240 aa	Known RBP	2.67	□□□□□ -1.98
VPS9	YML097C	IFM1	P25038	676 aa		2.67	□□□□□ -1.98
VPS9	YML097C	SIP3	P38717	1229 aa		2.67	□□□□□ -1.98
VPS9	YML097C	YIL012W	P40551	113 aa		2.67	□□□□□ -1.98
VPS9	YML097C	MEP2	P41948	499 aa		2.67	□□□□□ -1.98
VPS9	YML097C	TPN1	P53099	579 aa		2.67	□□□□□ -1.98
VPS9	YML097C	FMP48	P53233	369 aa		2.67	□□□□□ -1.98
VPS9	YML097C	YNL095C	P53932	642 aa		2.67	□□□□□ -1.98
VPS9	YML097C	KTR6	P54070	446 aa		2.67	□□□□□ -1.98
VPS9	YML097C	TPS1	Q00764	495 aa	Known RBP	2.67	□□□□□ -1.98
VPS9	YML097C	RMI1	Q02685	241 aa		2.67	□□□□□ -1.98
VPS9	YML097C	INP1	Q03694	420 aa		2.67	□□□□□ -1.98
VPS9	YML097C	VIK1	Q12045	647 aa		2.67	□□□□□ -1.98
VPS9	YML097C	PET494	P07390	489 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS9	YML097C	ASP3-2	P0CX77	362 aa		2.66	□□□□□ -1.98
VPS9	YML097C	ASP3-3	P0CX78	362 aa		2.66	□□□□□ -1.98
VPS9	YML097C	ASP3-4	P0CX79	362 aa		2.66	□□□□□ -1.98
VPS9	YML097C	ASP3-1	P0CZ17	362 aa		2.66	□□□□□ -1.98
VPS9	YML097C	NHP6B	P11633	99 aa	Known RBP	2.66	□□□□□ -1.98
VPS9	YML097C	RNA15	P25299	296 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS9	YML097C	QRI5	P32344	111 aa		2.66	□□□□□ -1.98
VPS9	YML097C	MAL32	P38158	584 aa		2.66	□□□□□ -1.98
VPS9	YML097C	MIC12	P38341	106 aa		2.66	□□□□□ -1.98
VPS9	YML097C	NPT1	P39683	429 aa	Known RBP	2.66	□□□□□ -1.98
VPS9	YML097C	VAB2	P40003	282 aa		2.66	□□□□□ -1.98
VPS9	YML097C	GAB1	P41733	394 aa		2.66	□□□□□ -1.98
VPS9	YML097C	YPI1	P43587	155 aa		2.66	□□□□□ -1.98
VPS9	YML097C	SDS23	P53172	527 aa		2.66	□□□□□ -1.98
VPS9	YML097C	MAL13	P53338	473 aa		2.66	□□□□□ -1.98
VPS9	YML097C	MAL12	P53341	584 aa		2.66	□□□□□ -1.98
VPS9	YML097C	ASI3	P53983	676 aa		2.66	□□□□□ -1.98
VPS9	YML097C	RNY1	Q02933	434 aa	Known RBP	2.66	□□□□□ -1.98
VPS9	YML097C	SEC13	Q04491	297 aa	Known RBP	2.66	□□□□□ -1.98
VPS9	YML097C	YLR283W	Q05867	314 aa		2.66	□□□□□ -1.98
VPS9	YML097C	WTM1	Q12363	437 aa	Known RBP	2.66	□□□□□ -1.98
VPS9	YML097C	YPL119C-A	Q3E751	87 aa		2.66	□□□□□ -1.98
VPS9	YML097C	STH1	P32597	1359 aa		2.66	□□□□□ -1.98
VPS9	YML097C	YMR316C-A	I2HB70	103 aa		2.65	□□□□□ -1.98
VPS9	YML097C	COQ1	P18900	473 aa		2.65	□□□□□ -1.98
VPS9	YML097C	YCR025C	P25352	136 aa		2.65	□□□□□ -1.98
VPS9	YML097C	IMP1	P28627	190 aa		2.65	□□□□□ -1.98
VPS9	YML097C	ZIP1	P31111	875 aa		2.65	□□□□□ -1.98
VPS9	YML097C	RFT1	P38206	574 aa	Predicted RBP	2.65	□□□□□ -1.98
VPS9	YML097C	GGC1	P38988	300 aa		2.65	□□□□□ -1.98
VPS9	YML097C	SHC1	P39000	512 aa		2.65	□□□□□ -1.98
VPS9	YML097C	SEN34	P39707	275 aa		2.65	□□□□□ -1.98
VPS9	YML097C	YER184C	P39961	794 aa		2.65	□□□□□ -1.98
VPS9	YML097C	AVT7	P40501	490 aa		2.65	□□□□□ -1.98
VPS9	YML097C	IBA57	P47158	497 aa		2.65	□□□□□ -1.98
VPS9	YML097C	COG7	P53195	279 aa		2.65	□□□□□ -1.98
VPS9	YML097C	ZRG17	P53735	605 aa		2.65	□□□□□ -1.98
VPS9	YML097C	VPS60	Q03390	229 aa		2.65	□□□□□ -1.98
VPS9	YML097C	YML018C	Q03730	393 aa		2.65	□□□□□ -1.98
VPS9	YML097C	YMR244W	Q04018	355 aa		2.65	□□□□□ -1.98
VPS9	YML097C	BNA7	Q04066	261 aa		2.65	□□□□□ -1.98
VPS9	YML097C	DAL81	P21657	970 aa		2.64	□□□□□ -1.99
VPS9	YML097C	EPT1	P22140	391 aa		2.64	□□□□□ -1.99
VPS9	YML097C	RPL24B	P24000	155 aa	Known RBP	2.64	□□□□□ -1.99
VPS9	YML097C	AEP1	P32493	518 aa		2.64	□□□□□ -1.99
VPS9	YML097C	YKL187C	P34231	750 aa		2.64	□□□□□ -1.99
VPS9	YML097C	JEN1	P36035	616 aa		2.64	□□□□□ -1.99
VPS9	YML097C	AIM29	P36154	155 aa		2.64	□□□□□ -1.99
VPS9	YML097C	FRM2	P37261	193 aa		2.64	□□□□□ -1.99
VPS9	YML097C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
VPS9	YML097C	GPI18	P38211	433 aa		2.64	□□□□□ -1.99
VPS9	YML097C	SMB1	P40018	196 aa	Known RBP	2.64	□□□□□ -1.99
VPS9	YML097C	SER33	P40510	469 aa		2.64	□□□□□ -1.99
VPS9	YML097C	GLG2	P47011	380 aa		2.64	□□□□□ -1.99
VPS9	YML097C	USE1	P53146	245 aa		2.64	□□□□□ -1.99
VPS9	YML097C	TRM44	Q02648	567 aa	Known RBP	2.64	□□□□□ -1.99
VPS9	YML097C	API2	Q04413	109 aa		2.64	□□□□□ -1.99
VPS9	YML097C	SSQ1	Q05931	657 aa	Predicted RBP	2.64	□□□□□ -1.99
VPS9	YML097C	YTH1	Q06102	208 aa	Predicted RBP	2.64	□□□□□ -1.99
VPS9	YML097C	SEC10	Q06245	871 aa		2.64	□□□□□ -1.99
VPS9	YML097C	YOL029C	Q08187	201 aa		2.64	□□□□□ -1.99
VPS9	YML097C	SME1	Q12330	94 aa	Predicted RBP	2.64	□□□□□ -1.99
VPS9	YML097C	FOL3	Q12676	427 aa	Predicted RBP	2.64	□□□□□ -1.99
VPS9	YML097C	YOS9	Q99220	542 aa		2.64	□□□□□ -1.99
VPS9	YML097C	FLO11	P08640	1367 aa		2.64	□□□□□ -1.99
VPS9	YML097C	THP2	O13539	261 aa	Known RBP	2.63	□□□□□ -1.99
VPS9	YML097C	COX4	P04037	155 aa		2.63	□□□□□ -1.99
VPS9	YML097C	PBN1	P25580	416 aa		2.63	□□□□□ -1.99
VPS9	YML097C	RPS5	P26783	225 aa	Known RBP	2.63	□□□□□ -1.99
VPS9	YML097C	CBT1	P36038	271 aa	Predicted RBP	2.63	□□□□□ -1.99
VPS9	YML097C	MRX3	P38172	270 aa		2.63	□□□□□ -1.99
VPS9	YML097C	MRP21	P38175	177 aa		2.63	□□□□□ -1.99
VPS9	YML097C	KRE29	P40026	464 aa		2.63	□□□□□ -1.99
VPS9	YML097C	THO1	P40040	218 aa	Known RBP	2.63	□□□□□ -1.99
VPS9	YML097C	GIM3	P53900	129 aa		2.63	□□□□□ -1.99
VPS9	YML097C	MRS2	Q01926	470 aa		2.63	□□□□□ -1.99
VPS9	YML097C	KRE28	Q04431	385 aa		2.63	□□□□□ -1.99
VPS9	YML097C	DCR2	Q05924	578 aa		2.63	□□□□□ -1.99
VPS9	YML097C	SPO77	Q06134	477 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 112.1 ms