RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W GGC1P38988 300 aa3.23□□□□□ -1.89
CTK1YKL139W ALD5P40047 520 aaKnown RBP3.23□□□□□ -1.89
CTK1YKL139W RPL10P41805 221 aaKnown RBP3.23□□□□□ -1.89
CTK1YKL139W PGU1P47180 361 aa3.23□□□□□ -1.89
CTK1YKL139W YPS5P53057 165 aa3.23□□□□□ -1.89
CTK1YKL139W FMP48P53233 369 aa3.23□□□□□ -1.89
CTK1YKL139W MRPL50P53724 139 aa3.23□□□□□ -1.89
CTK1YKL139W TRM44Q02648 567 aaKnown RBP3.23□□□□□ -1.89
CTK1YKL139W TDH2P00358 332 aaKnown RBP3.22□□□□□ -1.89
CTK1YKL139W MATALPHA1P0CY06 175 aa3.22□□□□□ -1.89
CTK1YKL139W HMLALPHA1P0CY07 175 aa3.22□□□□□ -1.89
CTK1YKL139W AEP1P32493 518 aa3.22□□□□□ -1.89
CTK1YKL139W YKT6P36015 200 aaKnown RBP3.22□□□□□ -1.89
CTK1YKL139W RFT1P38206 574 aaPredicted RBP3.22□□□□□ -1.89
CTK1YKL139W LDB7P38210 180 aa3.22□□□□□ -1.89
CTK1YKL139W MSS2P40990 351 aa3.22□□□□□ -1.89
CTK1YKL139W ASG7P46993 209 aa3.22□□□□□ -1.89
CTK1YKL139W YJR012CP47087 207 aa3.22□□□□□ -1.89
CTK1YKL139W RNY1Q02933 434 aaKnown RBP3.22□□□□□ -1.89
CTK1YKL139W YML018CQ03730 393 aa3.22□□□□□ -1.89
CTK1YKL139W API2Q04413 109 aa3.22□□□□□ -1.89
CTK1YKL139W YLR283WQ05867 314 aa3.22□□□□□ -1.89
CTK1YKL139W YDR018CQ12185 396 aa3.22□□□□□ -1.89
CTK1YKL139W ASP3-2P0CX77 362 aa3.21□□□□□ -1.89
CTK1YKL139W ASP3-3P0CX78 362 aa3.21□□□□□ -1.89
CTK1YKL139W ASP3-4P0CX79 362 aa3.21□□□□□ -1.89
CTK1YKL139W ASP3-1P0CZ17 362 aa3.21□□□□□ -1.89
CTK1YKL139W REV1P12689 985 aa3.21□□□□□ -1.89
CTK1YKL139W RPB4P20433 221 aaPredicted RBP3.21□□□□□ -1.89
CTK1YKL139W DAL81P21657 970 aa3.21□□□□□ -1.89
CTK1YKL139W MBA1P38300 278 aa3.21□□□□□ -1.89
CTK1YKL139W OTU1P43558 301 aa3.21□□□□□ -1.89
CTK1YKL139W YDR209CQ03480 137 aa3.21□□□□□ -1.89
CTK1YKL139W INP1Q03694 420 aa3.21□□□□□ -1.89
CTK1YKL139W PAL1Q05518 499 aaKnown RBP3.21□□□□□ -1.89
CTK1YKL139W SME1Q12330 94 aaPredicted RBP3.21□□□□□ -1.89
CTK1YKL139W GIS3Q12418 502 aa3.21□□□□□ -1.89
CTK1YKL139W FOL3Q12676 427 aaPredicted RBP3.21□□□□□ -1.89
CTK1YKL139W YCR025CP25352 136 aa3.21□□□□□ -1.9
CTK1YKL139W SPS19P32573 292 aaKnown RBP3.21□□□□□ -1.9
CTK1YKL139W TIP20P33891 701 aa3.21□□□□□ -1.9
CTK1YKL139W FRM2P37261 193 aa3.21□□□□□ -1.9
CTK1YKL139W SMP1P38128 452 aa3.21□□□□□ -1.9
CTK1YKL139W MRX3P38172 270 aa3.21□□□□□ -1.9
CTK1YKL139W YER184CP39961 794 aa3.21□□□□□ -1.9
CTK1YKL139W VEL1P53058 206 aa3.21□□□□□ -1.9
CTK1YKL139W SDT1P53078 280 aa3.21□□□□□ -1.9
CTK1YKL139W YGL039WP53183 348 aaKnown RBP3.21□□□□□ -1.9
CTK1YKL139W MAL13P53338 473 aa3.21□□□□□ -1.9
CTK1YKL139W VPS60Q03390 229 aa3.21□□□□□ -1.9
CTK1YKL139W YMR244WQ04018 355 aa3.21□□□□□ -1.9
CTK1YKL139W SEC10Q06245 871 aa3.21□□□□□ -1.9
CTK1YKL139W TMC1Q08422 150 aaPredicted RBP3.21□□□□□ -1.9
CTK1YKL139W YPL278CQ08990 100 aa3.21□□□□□ -1.9
CTK1YKL139W TCP1P12612 559 aaKnown RBP3.2□□□□□ -1.9
CTK1YKL139W EPT1P22140 391 aa3.2□□□□□ -1.9
CTK1YKL139W QRI5P32344 111 aa3.2□□□□□ -1.9
CTK1YKL139W MRPL27P36526 146 aaPredicted RBP3.2□□□□□ -1.9
CTK1YKL139W SHC1P39000 512 aa3.2□□□□□ -1.9
CTK1YKL139W SER33P40510 469 aa3.2□□□□□ -1.9
CTK1YKL139W GLG2P47011 380 aa3.2□□□□□ -1.9
CTK1YKL139W NOP13P53883 403 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
CTK1YKL139W MRPS16Q02608 121 aa3.2□□□□□ -1.9
CTK1YKL139W EBS1Q03466 884 aaKnown RBP3.2□□□□□ -1.9
CTK1YKL139W VHS1Q03785 461 aa3.2□□□□□ -1.9
CTK1YKL139W YOL029CQ08187 201 aa3.2□□□□□ -1.9
CTK1YKL139W RAX2Q12465 1220 aa3.2□□□□□ -1.9
CTK1YKL139W SNF8Q12483 233 aa3.2□□□□□ -1.9
CTK1YKL139W STH1P32597 1359 aa3.19□□□□□ -1.9
CTK1YKL139W YAL064W-BO13512 126 aa3.19□□□□□ -1.9
CTK1YKL139W RNA15P25299 296 aaPredicted RBP3.19□□□□□ -1.9
CTK1YKL139W ATG15P25641 520 aa3.19□□□□□ -1.9
CTK1YKL139W RPS5P26783 225 aaKnown RBP3.19□□□□□ -1.9
CTK1YKL139W SMB1P40018 196 aaKnown RBP3.19□□□□□ -1.9
CTK1YKL139W AVT7P40501 490 aa3.19□□□□□ -1.9
CTK1YKL139W KRE28Q04431 385 aa3.19□□□□□ -1.9
CTK1YKL139W LOA1Q06508 300 aa3.19□□□□□ -1.9
CTK1YKL139W YOS9Q99220 542 aa3.19□□□□□ -1.9
CTK1YKL139W PEX3P28795 441 aa3.18□□□□□ -1.9
CTK1YKL139W RRT13P40042 185 aa3.18□□□□□ -1.9
CTK1YKL139W RRG9P40156 214 aa3.18□□□□□ -1.9
CTK1YKL139W YGL262WP53054 175 aa3.18□□□□□ -1.9
CTK1YKL139W COG7P53195 279 aa3.18□□□□□ -1.9
CTK1YKL139W PGA2P53903 129 aa3.18□□□□□ -1.9
CTK1YKL139W SWS2P53937 143 aa3.18□□□□□ -1.9
CTK1YKL139W MHR1Q06630 226 aa3.18□□□□□ -1.9
CTK1YKL139W ADF1Q2V2Q1 113 aa3.18□□□□□ -1.9
CTK1YKL139W RHO1P06780 209 aaKnown RBP3.17□□□□□ -1.9
CTK1YKL139W VPS3P23643 1011 aa3.17□□□□□ -1.9
CTK1YKL139W PCL1P24867 279 aa3.17□□□□□ -1.9
CTK1YKL139W IMP1P28627 190 aa3.17□□□□□ -1.9
CTK1YKL139W AIM29P36154 155 aa3.17□□□□□ -1.9
CTK1YKL139W MRPL3P36516 390 aa3.17□□□□□ -1.9
CTK1YKL139W SEN34P39707 275 aa3.17□□□□□ -1.9
CTK1YKL139W YIL012WP40551 113 aa3.17□□□□□ -1.9
CTK1YKL139W DSN1P40568 576 aa3.17□□□□□ -1.9
CTK1YKL139W NBP35P52920 328 aa3.17□□□□□ -1.9
CTK1YKL139W YNL095CP53932 642 aa3.17□□□□□ -1.9
CTK1YKL139W YPL113CQ02961 396 aa3.17□□□□□ -1.9
CTK1YKL139W CSM4Q08955 156 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms