RNA–Protein interactions for RNA: YJR063W

RPA12, Transcript of RNA polymerase I subunit A12.2, yeastyeast

Gene RPA12, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA12YJR063W ASP3-3P0CX78 362 aa2.54□□□□□ -2
RPA12YJR063W ASP3-4P0CX79 362 aa2.54□□□□□ -2
RPA12YJR063W ASP3-1P0CZ17 362 aa2.54□□□□□ -2
RPA12YJR063W TCP1P12612 559 aaKnown RBP2.54□□□□□ -2
RPA12YJR063W REV1P12689 985 aa2.54□□□□□ -2
RPA12YJR063W PCL1P24867 279 aa2.54□□□□□ -2
RPA12YJR063W NTG1P31378 399 aa2.54□□□□□ -2
RPA12YJR063W SRB4P32569 687 aa2.54□□□□□ -2
RPA12YJR063W RFT1P38206 574 aaPredicted RBP2.54□□□□□ -2
RPA12YJR063W GPI18P38211 433 aa2.54□□□□□ -2
RPA12YJR063W BFR1P38934 470 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
RPA12YJR063W GGC1P38988 300 aa2.54□□□□□ -2
RPA12YJR063W DDI1P40087 428 aa2.54□□□□□ -2
RPA12YJR063W AVT7P40501 490 aa2.54□□□□□ -2
RPA12YJR063W YIL012WP40551 113 aa2.54□□□□□ -2
RPA12YJR063W YJR012CP47087 207 aa2.54□□□□□ -2
RPA12YJR063W KTR6P54070 446 aa2.54□□□□□ -2
RPA12YJR063W MRPS16Q02608 121 aa2.54□□□□□ -2
RPA12YJR063W CWC21Q03375 135 aaKnown RBP2.54□□□□□ -2
RPA12YJR063W EBS1Q03466 884 aaKnown RBP2.54□□□□□ -2
RPA12YJR063W YDR209CQ03480 137 aa2.54□□□□□ -2
RPA12YJR063W SEC13Q04491 297 aaKnown RBP2.54□□□□□ -2
RPA12YJR063W TAF9Q05027 157 aa2.54□□□□□ -2
RPA12YJR063W PAL1Q05518 499 aaKnown RBP2.54□□□□□ -2
RPA12YJR063W FOL3Q12676 427 aaPredicted RBP2.54□□□□□ -2
RPA12YJR063W TDH2P00358 332 aaKnown RBP2.53□□□□□ -2
RPA12YJR063W EPT1P22140 391 aa2.53□□□□□ -2
RPA12YJR063W YKL187CP34231 750 aa2.53□□□□□ -2
RPA12YJR063W YKT6P36015 200 aaKnown RBP2.53□□□□□ -2
RPA12YJR063W FRM2P37261 193 aa2.53□□□□□ -2
RPA12YJR063W PRS2P38620 318 aaKnown RBP2.53□□□□□ -2
RPA12YJR063W YER184CP39961 794 aa2.53□□□□□ -2
RPA12YJR063W RRT13P40042 185 aa2.53□□□□□ -2
RPA12YJR063W SER33P40510 469 aa2.53□□□□□ -2
RPA12YJR063W RPL10P41805 221 aaKnown RBP2.53□□□□□ -2
RPA12YJR063W IBA57P47158 497 aa2.53□□□□□ -2
RPA12YJR063W YGL262WP53054 175 aa2.53□□□□□ -2
RPA12YJR063W MAL13P53338 473 aa2.53□□□□□ -2
RPA12YJR063W VIK1Q12045 647 aa2.53□□□□□ -2
RPA12YJR063W YDR018CQ12185 396 aa2.53□□□□□ -2
RPA12YJR063W DAL81P21657 970 aa2.52□□□□□ -2.01
RPA12YJR063W IFM1P25038 676 aa2.52□□□□□ -2.01
RPA12YJR063W ATG15P25641 520 aa2.52□□□□□ -2.01
RPA12YJR063W IMP1P28627 190 aa2.52□□□□□ -2.01
RPA12YJR063W QRI5P32344 111 aa2.52□□□□□ -2.01
RPA12YJR063W AEP1P32493 518 aa2.52□□□□□ -2.01
RPA12YJR063W ZRT3P34240 503 aa2.52□□□□□ -2.01
RPA12YJR063W UTH1P36135 365 aa2.52□□□□□ -2.01
RPA12YJR063W MRPL27P36526 146 aaPredicted RBP2.52□□□□□ -2.01
RPA12YJR063W SHE3P38272 425 aaKnown RBP2.52□□□□□ -2.01
RPA12YJR063W MBA1P38300 278 aa2.52□□□□□ -2.01
RPA12YJR063W SEN34P39707 275 aa2.52□□□□□ -2.01
RPA12YJR063W ALD5P40047 520 aaKnown RBP2.52□□□□□ -2.01
RPA12YJR063W ASG7P46993 209 aa2.52□□□□□ -2.01
RPA12YJR063W GLG2P47011 380 aa2.52□□□□□ -2.01
RPA12YJR063W MRPL50P53724 139 aa2.52□□□□□ -2.01
RPA12YJR063W YNL095CP53932 642 aa2.52□□□□□ -2.01
RPA12YJR063W RNY1Q02933 434 aaKnown RBP2.52□□□□□ -2.01
RPA12YJR063W VPS60Q03390 229 aa2.52□□□□□ -2.01
RPA12YJR063W YML018CQ03730 393 aa2.52□□□□□ -2.01
RPA12YJR063W LOA1Q06508 300 aa2.52□□□□□ -2.01
RPA12YJR063W SNF8Q12483 233 aa2.52□□□□□ -2.01
RPA12YJR063W YAL067W-AQ8TGK6 75 aa2.52□□□□□ -2.01
RPA12YJR063W RHO1P06780 209 aaKnown RBP2.51□□□□□ -2.01
RPA12YJR063W SPS19P32573 292 aaKnown RBP2.51□□□□□ -2.01
RPA12YJR063W NPT1P39683 429 aaKnown RBP2.51□□□□□ -2.01
RPA12YJR063W MSS2P40990 351 aa2.51□□□□□ -2.01
RPA12YJR063W SDT1P53078 280 aa2.51□□□□□ -2.01
RPA12YJR063W YGL039WP53183 348 aaKnown RBP2.51□□□□□ -2.01
RPA12YJR063W NOP13P53883 403 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
RPA12YJR063W HAL1Q01766 294 aa2.51□□□□□ -2.01
RPA12YJR063W MRS2Q01926 470 aa2.51□□□□□ -2.01
RPA12YJR063W YPL113CQ02961 396 aa2.51□□□□□ -2.01
RPA12YJR063W VHS1Q03785 461 aa2.51□□□□□ -2.01
RPA12YJR063W MHR1Q06630 226 aa2.51□□□□□ -2.01
RPA12YJR063W TIP20P33891 701 aa2.5□□□□□ -2.01
RPA12YJR063W SMB1P40018 196 aaKnown RBP2.5□□□□□ -2.01
RPA12YJR063W KRE29P40026 464 aa2.5□□□□□ -2.01
RPA12YJR063W RRG9P40156 214 aa2.5□□□□□ -2.01
RPA12YJR063W OTU1P43558 301 aa2.5□□□□□ -2.01
RPA12YJR063W TRM44Q02648 567 aaKnown RBP2.5□□□□□ -2.01
RPA12YJR063W CTF19Q02732 369 aa2.5□□□□□ -2.01
RPA12YJR063W UTP15Q04305 513 aaKnown RBP2.5□□□□□ -2.01
RPA12YJR063W SEC10Q06245 871 aa2.5□□□□□ -2.01
RPA12YJR063W YPL119C-AQ3E751 87 aa2.5□□□□□ -2.01
RPA12YJR063W STH1P32597 1359 aa2.49□□□□□ -2.01
RPA12YJR063W CDC36P06100 191 aaPredicted RBP2.49□□□□□ -2.01
RPA12YJR063W RNA15P25299 296 aaPredicted RBP2.49□□□□□ -2.01
RPA12YJR063W RPS5P26783 225 aaKnown RBP2.49□□□□□ -2.01
RPA12YJR063W JEN1P36035 616 aa2.49□□□□□ -2.01
RPA12YJR063W MRX3P38172 270 aa2.49□□□□□ -2.01
RPA12YJR063W MRP21P38175 177 aa2.49□□□□□ -2.01
RPA12YJR063W HEK2P38199 381 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01 RIP-Chip
RPA12YJR063W EFM1P38732 585 aa2.49□□□□□ -2.01
RPA12YJR063W PRE5P40302 234 aaKnown RBP2.49□□□□□ -2.01
RPA12YJR063W GCN20P43535 752 aaKnown RBP2.49□□□□□ -2.01
RPA12YJR063W HOC1P47124 396 aa2.49□□□□□ -2.01
RPA12YJR063W JHD2P47156 728 aaPredicted RBP2.49□□□□□ -2.01
RPA12YJR063W PRP24P49960 444 aaKnown RBP2.49□□□□□ -2.01
RPA12YJR063W NBP35P52920 328 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 87.7 ms