RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C SER33P40510 469 aa1.78□□□□□ -2.12
RTT101YJL047C AIM23P47015 356 aa1.78□□□□□ -2.12
RTT101YJL047C GWT1P47026 490 aa1.78□□□□□ -2.12
RTT101YJL047C YJR056CP47115 236 aa1.78□□□□□ -2.12
RTT101YJL047C AVT4P50944 713 aa1.78□□□□□ -2.12
RTT101YJL047C MMS2P53152 137 aa1.78□□□□□ -2.12
RTT101YJL047C SWC4P53201 476 aa1.78□□□□□ -2.12
RTT101YJL047C YNR066CP53752 436 aa1.78□□□□□ -2.12
RTT101YJL047C IBD2P53892 351 aa1.78□□□□□ -2.12
RTT101YJL047C SWS2P53937 143 aa1.78□□□□□ -2.12
RTT101YJL047C PRM6Q04705 352 aa1.78□□□□□ -2.12
RTT101YJL047C RIF2Q06208 395 aa1.78□□□□□ -2.12
RTT101YJL047C LOA1Q06508 300 aa1.78□□□□□ -2.12
RTT101YJL047C MHR1Q06630 226 aa1.78□□□□□ -2.12
RTT101YJL047C AIM39Q08223 395 aa1.78□□□□□ -2.12
RTT101YJL047C YNG1Q08465 219 aa1.78□□□□□ -2.12
RTT101YJL047C HNT3Q08702 217 aa1.78□□□□□ -2.12
RTT101YJL047C TIM18Q08749 192 aa1.78□□□□□ -2.12
RTT101YJL047C STH1P32597 1359 aa1.77□□□□□ -2.13
RTT101YJL047C RPS14AP06367 137 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C CUP2P15315 225 aa1.77□□□□□ -2.13
RTT101YJL047C SAM2P19358 384 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C YAP1P19880 650 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C TRR1P29509 319 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C PDC2P32896 925 aa1.77□□□□□ -2.13
RTT101YJL047C THI80P35202 319 aa1.77□□□□□ -2.13
RTT101YJL047C YCR087C-AP37263 153 aa1.77□□□□□ -2.13
RTT101YJL047C APD1P38281 316 aa1.77□□□□□ -2.13
RTT101YJL047C RPS14BP39516 138 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C DFG10P40526 253 aa1.77□□□□□ -2.13
RTT101YJL047C OST3P48439 350 aa1.77□□□□□ -2.13
RTT101YJL047C TPN1P53099 579 aa1.77□□□□□ -2.13
RTT101YJL047C NQM1P53228 333 aaPredicted RBP1.77□□□□□ -2.13
RTT101YJL047C NRK1P53915 240 aa1.77□□□□□ -2.13
RTT101YJL047C KIN4Q01919 800 aa1.77□□□□□ -2.13
RTT101YJL047C IRC15Q02733 499 aa1.77□□□□□ -2.13
RTT101YJL047C ODC1Q03028 310 aa1.77□□□□□ -2.13
RTT101YJL047C CTL1Q03220 320 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C YDR248CQ03786 193 aa1.77□□□□□ -2.13
RTT101YJL047C BCH1Q05029 724 aa1.77□□□□□ -2.13
RTT101YJL047C GRX8Q05926 109 aa1.77□□□□□ -2.13
RTT101YJL047C BSP1Q06604 576 aa1.77□□□□□ -2.13
RTT101YJL047C YPL199CQ08954 240 aa1.77□□□□□ -2.13
RTT101YJL047C YGK3Q12222 375 aaPredicted RBP1.77□□□□□ -2.13
RTT101YJL047C YLR126CQ12288 251 aa1.77□□□□□ -2.13
RTT101YJL047C YPR064WQ12492 139 aa1.77□□□□□ -2.13
RTT101YJL047C YPL119C-AQ3E751 87 aa1.77□□□□□ -2.13
RTT101YJL047C YCR024C-BQ3E7Z8 88 aa1.77□□□□□ -2.13
RTT101YJL047C ECM5Q03214 1411 aa1.77□□□□□ -2.13
RTT101YJL047C YOL163WP0CF20 169 aa1.77□□□□□ -2.13
RTT101YJL047C ISY1P21374 235 aaPredicted RBP1.77□□□□□ -2.13
RTT101YJL047C DBF2P22204 572 aa1.77□□□□□ -2.13
RTT101YJL047C PHA2P32452 334 aa1.77□□□□□ -2.13
RTT101YJL047C GLC7P32598 312 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C CLG1P35190 452 aa1.77□□□□□ -2.13
RTT101YJL047C SRY1P36007 326 aa1.77□□□□□ -2.13
RTT101YJL047C YKR041WP36134 250 aa1.77□□□□□ -2.13
RTT101YJL047C MST28P39552 234 aa1.77□□□□□ -2.13
RTT101YJL047C GIM4P40005 111 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C YER076CP40049 302 aa1.77□□□□□ -2.13
RTT101YJL047C PRE6P40303 254 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C RSM25P40496 264 aa1.77□□□□□ -2.13
RTT101YJL047C RTS2P40962 232 aa1.77□□□□□ -2.13
RTT101YJL047C TOS8P53147 276 aa1.77□□□□□ -2.13
RTT101YJL047C JAC1P53193 184 aa1.77□□□□□ -2.13
RTT101YJL047C SYF2P53277 215 aaPredicted RBP1.77□□□□□ -2.13
RTT101YJL047C GTR2P53290 341 aa1.77□□□□□ -2.13
RTT101YJL047C HCH1P53834 153 aa1.77□□□□□ -2.13
RTT101YJL047C TRM44Q02648 567 aaKnown RBP1.77□□□□□ -2.13
RTT101YJL047C SCS7Q03529 384 aa1.77□□□□□ -2.13
RTT101YJL047C TRM82Q03774 444 aa1.77□□□□□ -2.13
RTT101YJL047C MUM3Q08750 479 aa1.77□□□□□ -2.13
RTT101YJL047C MMT2Q08970 484 aa1.77□□□□□ -2.13
RTT101YJL047C FRE8Q12209 686 aa1.77□□□□□ -2.13
RTT101YJL047C NOT5Q12514 560 aaPredicted RBP1.77□□□□□ -2.13
RTT101YJL047C YPL229WQ99395 206 aa1.77□□□□□ -2.13
RTT101YJL047C BCY1P07278 416 aaKnown RBP1.76□□□□□ -2.13
RTT101YJL047C DPM1P14020 267 aaKnown RBP1.76□□□□□ -2.13
RTT101YJL047C UBC8P28263 218 aa1.76□□□□□ -2.13
RTT101YJL047C ELM1P32801 640 aa1.76□□□□□ -2.13
RTT101YJL047C SHG1P38337 142 aa1.76□□□□□ -2.13
RTT101YJL047C MTC6P38849 526 aa1.76□□□□□ -2.13
RTT101YJL047C SBH2P52871 88 aa1.76□□□□□ -2.13
RTT101YJL047C POP6P53218 158 aa1.76□□□□□ -2.13
RTT101YJL047C RHO3Q00245 231 aaKnown RBP1.76□□□□□ -2.13
RTT101YJL047C YMR027WQ04371 470 aa1.76□□□□□ -2.13
RTT101YJL047C DPP1Q05521 289 aa1.76□□□□□ -2.13
RTT101YJL047C ORM2Q06144 216 aa1.76□□□□□ -2.13
RTT101YJL047C PEX30Q06169 523 aa1.76□□□□□ -2.13
RTT101YJL047C NOC4Q06512 552 aaPredicted RBP1.76□□□□□ -2.13
RTT101YJL047C COQ10Q08058 207 aa1.76□□□□□ -2.13
RTT101YJL047C YDL199CQ12407 687 aa1.76□□□□□ -2.13
RTT101YJL047C ARP6Q12509 438 aa1.76□□□□□ -2.13
RTT101YJL047C ERD1P16151 362 aa1.76□□□□□ -2.13
RTT101YJL047C HCM1P25364 564 aa1.76□□□□□ -2.13
RTT101YJL047C AGA1P32323 725 aa1.76□□□□□ -2.13
RTT101YJL047C MDH3P32419 343 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
RTT101YJL047C CAT2P32796 670 aaKnown RBP1.76□□□□□ -2.13
RTT101YJL047C YNK1P36010 153 aaKnown RBP1.76□□□□□ -2.13
RTT101YJL047C AVT5P38176 459 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms