RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C ATG40Q99325 256 aa3.23□□□□□ -1.89
SSM4YIL030C URA6P15700 204 aa3.23□□□□□ -1.89
SSM4YIL030C YCR025CP25352 136 aa3.23□□□□□ -1.89
SSM4YIL030C CPR5P35176 225 aa3.23□□□□□ -1.89
SSM4YIL030C HXT5P38695 592 aa3.23□□□□□ -1.89
SSM4YIL030C YFL054CP43549 646 aa3.23□□□□□ -1.89
SSM4YIL030C OTU1P43558 301 aa3.23□□□□□ -1.89
SSM4YIL030C IDS2P46958 469 aa3.23□□□□□ -1.89
SSM4YIL030C RAD17P48581 401 aa3.23□□□□□ -1.89
SSM4YIL030C MEP3P53390 489 aa3.23□□□□□ -1.89
SSM4YIL030C ROY1Q04847 553 aa3.23□□□□□ -1.89
SSM4YIL030C MET2P08465 486 aa3.23□□□□□ -1.89
SSM4YIL030C NAM9P27929 486 aa3.23□□□□□ -1.89
SSM4YIL030C PEX32P38292 413 aa3.23□□□□□ -1.89
SSM4YIL030C YHR035WP38769 630 aa3.23□□□□□ -1.89
SSM4YIL030C POP2P39008 433 aa3.23□□□□□ -1.89
SSM4YIL030C ALD5P40047 520 aaKnown RBP3.23□□□□□ -1.89
SSM4YIL030C TIR3P40552 269 aa3.23□□□□□ -1.89
SSM4YIL030C BNS1P50084 137 aa3.23□□□□□ -1.89
SSM4YIL030C UTP15Q04305 513 aaKnown RBP3.23□□□□□ -1.89
SSM4YIL030C MHR1Q06630 226 aa3.23□□□□□ -1.89
SSM4YIL030C YEH1Q07804 573 aa3.23□□□□□ -1.89
SSM4YIL030C GUP2Q08929 609 aa3.23□□□□□ -1.89
SSM4YIL030C SLF1Q12034 447 aaKnown RBP3.23□□□□□ -1.89
SSM4YIL030C MDM35O60200 86 aa3.22□□□□□ -1.89
SSM4YIL030C KAE1P36132 386 aa3.22□□□□□ -1.89
SSM4YIL030C ALG3P38179 458 aa3.22□□□□□ -1.89
SSM4YIL030C SKN7P38889 622 aa3.22□□□□□ -1.89
SSM4YIL030C BTT1P40314 149 aaPredicted RBP3.22□□□□□ -1.89
SSM4YIL030C PAC10P48363 199 aa3.22□□□□□ -1.89
SSM4YIL030C YMR010WQ03687 405 aa3.22□□□□□ -1.89
SSM4YIL030C YMR315WQ04869 349 aaKnown RBP3.22□□□□□ -1.89
SSM4YIL030C STP4Q07351 490 aa3.22□□□□□ -1.89
SSM4YIL030C PFA4Q12006 378 aa3.22□□□□□ -1.89
SSM4YIL030C MCK1P21965 375 aaKnown RBP3.22□□□□□ -1.89
SSM4YIL030C MAK32P23060 363 aa3.22□□□□□ -1.89
SSM4YIL030C LYP1P32487 611 aa3.22□□□□□ -1.89
SSM4YIL030C SRB6P32570 121 aa3.22□□□□□ -1.89
SSM4YIL030C MDL1P33310 695 aa3.22□□□□□ -1.89
SSM4YIL030C ARF3P40994 183 aaRIP-Chip data3.22□□□□□ -1.89 RIP-Chip
SSM4YIL030C TRM112P53738 135 aaPredicted RBP3.22□□□□□ -1.89
SSM4YIL030C CRN1Q06440 651 aa3.22□□□□□ -1.89
SSM4YIL030C LAS17Q12446 633 aa3.22□□□□□ -1.89
SSM4YIL030C OPI3P05375 206 aa3.22□□□□□ -1.89
SSM4YIL030C RAD52P06778 471 aaKnown RBP3.22□□□□□ -1.89
SSM4YIL030C GAL7P08431 366 aa3.22□□□□□ -1.89
SSM4YIL030C PAU19P0CE85 124 aa3.22□□□□□ -1.89
SSM4YIL030C PAU21P0CE86 164 aa3.22□□□□□ -1.89
SSM4YIL030C PAU22P0CE87 164 aa3.22□□□□□ -1.89
SSM4YIL030C PAU3P25610 124 aa3.22□□□□□ -1.89
SSM4YIL030C VAM7P32912 316 aa3.22□□□□□ -1.89
SSM4YIL030C PRS3P38689 320 aaKnown RBP3.22□□□□□ -1.89
SSM4YIL030C BUL1P48524 976 aa3.22□□□□□ -1.89
SSM4YIL030C MNT2P53059 558 aa3.22□□□□□ -1.89
SSM4YIL030C MAL12P53341 584 aa3.22□□□□□ -1.89
SSM4YIL030C YNL134CP53912 376 aaKnown RBP3.22□□□□□ -1.89
SSM4YIL030C RSM10Q03201 203 aa3.22□□□□□ -1.89
SSM4YIL030C TY1A-MR1Q04215 440 aa3.22□□□□□ -1.89
SSM4YIL030C TY1A-BLQ12266 440 aa3.22□□□□□ -1.89
SSM4YIL030C YGL194C-AQ2V2P6 80 aa3.22□□□□□ -1.89
SSM4YIL030C RPS31P05759 152 aaKnown RBP3.21□□□□□ -1.89
SSM4YIL030C YFL068WP0CX99 160 aa3.21□□□□□ -1.89
SSM4YIL030C YLL066W-AP0CY00 160 aa3.21□□□□□ -1.89
SSM4YIL030C YLL067W-AP0CY01 160 aa3.21□□□□□ -1.89
SSM4YIL030C OLE1P21147 510 aaKnown RBP3.21□□□□□ -1.89
SSM4YIL030C ADE1P27616 306 aa3.21□□□□□ -1.89
SSM4YIL030C MRP17P28778 131 aa3.21□□□□□ -1.89
SSM4YIL030C MAL32P38158 584 aa3.21□□□□□ -1.89
SSM4YIL030C LAG1P38703 411 aa3.21□□□□□ -1.89
SSM4YIL030C CTL1Q03220 320 aaKnown RBP3.21□□□□□ -1.89
SSM4YIL030C YDR415CQ04033 374 aaPredicted RBP3.21□□□□□ -1.89
SSM4YIL030C CUE4Q04201 117 aaPredicted RBP3.21□□□□□ -1.89
SSM4YIL030C SWF1Q04629 336 aa3.21□□□□□ -1.89
SSM4YIL030C HEM25Q07534 307 aa3.21□□□□□ -1.89
SSM4YIL030C PHO2P07269 559 aa3.21□□□□□ -1.9
SSM4YIL030C STE50P25344 346 aa3.21□□□□□ -1.9
SSM4YIL030C ECM25P32525 599 aa3.21□□□□□ -1.9
SSM4YIL030C MGM101P32787 269 aaKnown RBP3.21□□□□□ -1.9
SSM4YIL030C MTR2P34232 184 aaKnown RBP3.21□□□□□ -1.9
SSM4YIL030C FYV4P38783 130 aaPredicted RBP3.21□□□□□ -1.9
SSM4YIL030C YHR078WP38799 552 aa3.21□□□□□ -1.9
SSM4YIL030C OCA1P50946 238 aaPredicted RBP3.21□□□□□ -1.9
SSM4YIL030C TIM13P53299 105 aa3.21□□□□□ -1.9
SSM4YIL030C NRK1P53915 240 aa3.21□□□□□ -1.9
SSM4YIL030C MTQ1P53944 314 aa3.21□□□□□ -1.9
SSM4YIL030C SNO1Q03144 224 aa3.21□□□□□ -1.9
SSM4YIL030C TY1A-DR2Q03964 440 aaKnown RBP3.21□□□□□ -1.9
SSM4YIL030C PPN1Q04119 674 aa3.21□□□□□ -1.9
SSM4YIL030C VBA1Q04301 562 aa3.21□□□□□ -1.9
SSM4YIL030C VPS68Q12016 184 aa3.21□□□□□ -1.9
SSM4YIL030C AI1P03875 834 aa3.21□□□□□ -1.9
SSM4YIL030C HNM1P19807 563 aa3.21□□□□□ -1.9
SSM4YIL030C MTC4P38335 694 aaKnown RBP3.21□□□□□ -1.9
SSM4YIL030C HPA3P39979 161 aa3.21□□□□□ -1.9
SSM4YIL030C MRPS18P42847 217 aa3.21□□□□□ -1.9
SSM4YIL030C YGR026WP53217 278 aa3.21□□□□□ -1.9
SSM4YIL030C YIF1P53845 314 aaKnown RBP3.21□□□□□ -1.9
SSM4YIL030C FYV6P53913 173 aa3.21□□□□□ -1.9
SSM4YIL030C YPR114WQ06107 315 aa3.21□□□□□ -1.9
SSM4YIL030C TMS1Q12116 473 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms