RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W RPC37P36121 282 aa2.09□□□□□ -2.07
LOC1YFR001W YBL081WP38180 368 aaKnown RBP2.09□□□□□ -2.07
LOC1YFR001W YER084WP40057 128 aa2.09□□□□□ -2.07
LOC1YFR001W GTO1P48239 356 aa2.09□□□□□ -2.07
LOC1YFR001W YPT32P51996 222 aaKnown RBP2.09□□□□□ -2.07
LOC1YFR001W YPL077CQ02831 240 aa2.09□□□□□ -2.07
LOC1YFR001W ASR1Q06834 288 aa2.09□□□□□ -2.07
LOC1YFR001W YDL144CQ07589 356 aa2.09□□□□□ -2.07
LOC1YFR001W PRR2Q12310 699 aa2.09□□□□□ -2.07
LOC1YFR001W ATP6P00854 259 aa2.08□□□□□ -2.08
LOC1YFR001W RSA4P25382 515 aaKnown RBP2.08□□□□□ -2.08
LOC1YFR001W AVT6P40074 448 aa2.08□□□□□ -2.08
LOC1YFR001W SCC4P40090 624 aa2.08□□□□□ -2.08
LOC1YFR001W AVT7P40501 490 aa2.08□□□□□ -2.08
LOC1YFR001W MRS2Q01926 470 aa2.08□□□□□ -2.08
LOC1YFR001W DPP1Q05521 289 aa2.08□□□□□ -2.08
LOC1YFR001W NNT1Q05874 261 aa2.08□□□□□ -2.08
LOC1YFR001W CLP1Q08685 445 aaPredicted RBP2.08□□□□□ -2.08
LOC1YFR001W FEX1Q08913 375 aa2.08□□□□□ -2.08
LOC1YFR001W FEX2Q08991 375 aa2.08□□□□□ -2.08
LOC1YFR001W TFS1P14306 219 aa2.07□□□□□ -2.08
LOC1YFR001W GPI12P23797 304 aa2.07□□□□□ -2.08
LOC1YFR001W SPT4P32914 102 aaPredicted RBP2.07□□□□□ -2.08
LOC1YFR001W YKR032WP36127 104 aa2.07□□□□□ -2.08
LOC1YFR001W VPS45P38932 577 aa2.07□□□□□ -2.08
LOC1YFR001W AGP3P43548 558 aa2.07□□□□□ -2.08
LOC1YFR001W MIG2P53035 382 aa2.07□□□□□ -2.08
LOC1YFR001W TPN1P53099 579 aa2.07□□□□□ -2.08
LOC1YFR001W MIX17Q03667 156 aa2.07□□□□□ -2.08
LOC1YFR001W YOR114WQ12219 294 aa2.07□□□□□ -2.08
LOC1YFR001W TIM22Q12328 207 aa2.07□□□□□ -2.08
LOC1YFR001W ATG5Q12380 294 aa2.07□□□□□ -2.08
LOC1YFR001W GAL7P08431 366 aa2.06□□□□□ -2.08
LOC1YFR001W OSM1P21375 501 aaKnown RBP2.06□□□□□ -2.08
LOC1YFR001W RPS0AP32905 252 aaKnown RBP2.06□□□□□ -2.08
LOC1YFR001W TRM7P38238 310 aaKnown RBP2.06□□□□□ -2.08
LOC1YFR001W SHQ1P40486 507 aaPredicted RBP2.06□□□□□ -2.08
LOC1YFR001W RSM27P53305 110 aa2.06□□□□□ -2.08
LOC1YFR001W SPO19Q03029 223 aa2.06□□□□□ -2.08
LOC1YFR001W YMR209CQ03648 457 aa2.06□□□□□ -2.08
LOC1YFR001W YML018CQ03730 393 aa2.06□□□□□ -2.08
LOC1YFR001W TVP15Q03860 143 aa2.06□□□□□ -2.08
LOC1YFR001W ECM18Q04623 453 aa2.06□□□□□ -2.08
LOC1YFR001W UGA1P17649 471 aa2.05□□□□□ -2.08
LOC1YFR001W CAB3P36076 571 aa2.05□□□□□ -2.08
LOC1YFR001W HIS2P38635 335 aa2.05□□□□□ -2.08
LOC1YFR001W SEN34P39707 275 aa2.05□□□□□ -2.08
LOC1YFR001W KEL2P50090 882 aa2.05□□□□□ -2.08
LOC1YFR001W PNC1P53184 216 aaKnown RBP2.05□□□□□ -2.08
LOC1YFR001W ALG9P53868 555 aaKnown RBP2.05□□□□□ -2.08
LOC1YFR001W SWT21P53873 357 aaPredicted RBP2.05□□□□□ -2.08
LOC1YFR001W BCP1Q06338 283 aa2.05□□□□□ -2.08
LOC1YFR001W BER1Q06688 274 aaKnown RBP2.05□□□□□ -2.08
LOC1YFR001W HIS3P06633 220 aa2.04□□□□□ -2.08
LOC1YFR001W ZWF1P11412 505 aaKnown RBP2.04□□□□□ -2.08
LOC1YFR001W ATG15P25641 520 aa2.04□□□□□ -2.08
LOC1YFR001W CSM1P25651 190 aa2.04□□□□□ -2.08
LOC1YFR001W SUA5P32579 426 aa2.04□□□□□ -2.08
LOC1YFR001W COT1P32798 439 aa2.04□□□□□ -2.08
LOC1YFR001W TDA11P38854 504 aa2.04□□□□□ -2.08
LOC1YFR001W GCD14P46959 383 aaPredicted RBP2.04□□□□□ -2.08
LOC1YFR001W YNL095CP53932 642 aa2.04□□□□□ -2.08
LOC1YFR001W TAF9Q05027 157 aa2.04□□□□□ -2.08
LOC1YFR001W GPN3Q06543 272 aa2.04□□□□□ -2.08
LOC1YFR001W YLL007CQ07799 665 aa2.04□□□□□ -2.08
LOC1YFR001W POM33Q12164 279 aa2.04□□□□□ -2.08
LOC1YFR001W PET494P07390 489 aaPredicted RBP2.03□□□□□ -2.08
LOC1YFR001W SPL2P38839 148 aa2.03□□□□□ -2.08
LOC1YFR001W SUR2P38992 349 aa2.03□□□□□ -2.08
LOC1YFR001W YER188WP40103 239 aa2.03□□□□□ -2.08
LOC1YFR001W PCL7P40186 285 aa2.03□□□□□ -2.08
LOC1YFR001W YIA6P40556 373 aa2.03□□□□□ -2.08
LOC1YFR001W OST3P48439 350 aa2.03□□□□□ -2.08
LOC1YFR001W COG7P53195 279 aa2.03□□□□□ -2.08
LOC1YFR001W MEK1P24719 497 aaPredicted RBP2.02□□□□□ -2.09
LOC1YFR001W KRE6P32486 720 aa2.02□□□□□ -2.09
LOC1YFR001W MRPL40P36534 297 aa2.02□□□□□ -2.09
LOC1YFR001W POP8P38208 133 aa2.02□□□□□ -2.09
LOC1YFR001W PHO89P38361 574 aa2.02□□□□□ -2.09
LOC1YFR001W RPE1P46969 238 aa2.02□□□□□ -2.09
LOC1YFR001W SYF2P53277 215 aaPredicted RBP2.02□□□□□ -2.09
LOC1YFR001W YNL260CP53846 198 aa2.02□□□□□ -2.09
LOC1YFR001W ERV41Q04651 352 aa2.02□□□□□ -2.09
LOC1YFR001W ILV1P00927 576 aaKnown RBP2.01□□□□□ -2.09
LOC1YFR001W FRS2P15625 503 aaKnown RBP2.01□□□□□ -2.09
LOC1YFR001W DBP3P20447 523 aaKnown RBP2.01□□□□□ -2.09
LOC1YFR001W ERG2P32352 222 aa2.01□□□□□ -2.09
LOC1YFR001W CAT2P32796 670 aaKnown RBP2.01□□□□□ -2.09
LOC1YFR001W MED6P38782 295 aa2.01□□□□□ -2.09
LOC1YFR001W PIR5P46999 287 aa2.01□□□□□ -2.09
LOC1YFR001W IBA57P47158 497 aa2.01□□□□□ -2.09
LOC1YFR001W YGL185CP53100 379 aa2.01□□□□□ -2.09
LOC1YFR001W ARP5P53946 755 aa2.01□□□□□ -2.09
LOC1YFR001W VPS60Q03390 229 aa2.01□□□□□ -2.09
LOC1YFR001W LOA1Q06508 300 aa2.01□□□□□ -2.09
LOC1YFR001W PAN1P32521 1480 aa2.01□□□□□ -2.09
LOC1YFR001W CPD1P53314 239 aa2□□□□□ -2.09
LOC1YFR001W FMP41P53889 259 aaKnown RBP2□□□□□ -2.09
LOC1YFR001W RGM1Q00453 211 aa2□□□□□ -2.09
LOC1YFR001W FCF1Q05498 189 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms