RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ASAP2O43150 1006 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 RRP9O43818 475 aaKnown RBP11.22□□□□□ -0.61
PHGDH-224ENST00000641711 CKBP12277 381 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 HNRNPH3P31942 346 aaKnown RBP11.22□□□□□ -0.61
PHGDH-224ENST00000641711 IGBP1P78318 339 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 MRPS6P82932 125 aaKnown RBP11.22□□□□□ -0.61
PHGDH-224ENST00000641711 ZBED6P86452 979 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 SCN5AQ14524 2016 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 HIC1Q14526 733 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 EMC2Q15006 297 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 HERC4Q5GLZ8 1057 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-224ENST00000641711 LRRC8DQ7L1W4 858 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 EPM2AIP1Q7L775 607 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-224ENST00000641711 MICAL3Q7RTP6 2002 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 ZNF410Q86VK4 478 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 GLIS3Q8NEA6 775 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 TRIM43Q96BQ3 446 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-224ENST00000641711 EDEM3Q9BZQ6 932 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 NDST4Q9H3R1 872 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 MRPL44Q9H9J2 332 aaKnown RBP11.22□□□□□ -0.61
PHGDH-224ENST00000641711 DNAI1Q9UI46 699 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 SIK3Q9Y2K2 1263 aa11.22□□□□□ -0.61
PHGDH-224ENST00000641711 NPHP3-ACAD11A0A0J9YXS1 232 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 FANCGO15287 622 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 EFCAB14O75071 495 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 GAP43P17677 238 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 GNG11P61952 73 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 FPGSQ05932 587 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 POU5F1BQ06416 359 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 NCBP1Q09161 790 aaKnown RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 MXD4Q14582 209 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 PCBP1Q15365 356 aaKnown RBP eCLIP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 PLA2G4FQ68DD2 849 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 EFCAB12Q6NXP0 572 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 PSRC1Q6PGN9 363 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 RPUSD2Q8IZ73 545 aaKnown RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 KIAA0319LQ8IZA0 1049 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 PSPC1Q8WXF1 523 aaKnown RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 REEP2Q9BRK0 252 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 DESI2Q9BSY9 194 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 WNT8AQ9H1J5 351 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 C17orf75Q9HAS0 396 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 OLFML3Q9NRN5 406 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 MYO1AQ9UBC5 1043 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 KCNG1Q9UIX4 513 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 TRAF3IP3Q9Y228 551 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 COL4A3BPQ9Y5P4 624 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 TRPV2Q9Y5S1 764 aa11.21□□□□□ -0.61
PHGDH-224ENST00000641711 EPN1Q9Y6I3 576 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-224ENST00000641711 A0A1W2PPC1 479 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 RSPH10B2B2RC85 870 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 PES1O00541 588 aaKnown RBP11.2□□□□□ -0.62
PHGDH-224ENST00000641711 CXCL10P02778 98 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 IQCF3P0C7M6 154 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 RSPH10BP0C881 870 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
PHGDH-224ENST00000641711 SCP2P22307 547 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 GUCY2CP25092 1073 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 CASQ1P31415 396 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 BMP8BP34820 402 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 THPOP40225 353 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 NPEPPSP55786 919 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 MGAT3Q09327 533 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 TUBB2AQ13885 445 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 PPP2R5AQ15172 486 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 RINT1Q6NUQ1 792 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 WDR59Q6PJI9 974 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 TRAF7Q6Q0C0 670 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 RUFY4Q6ZNE9 571 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 CCDC170Q8IYT3 715 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 METTL13Q8N6R0 699 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 ZNF397Q8NF99 534 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-224ENST00000641711 PIGOQ8TEQ8 1089 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 DNAJB3Q8WWF6 145 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 TSC1Q92574 1164 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 KIFAP3Q92845 792 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 APBB2Q92870 758 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 TUBB2BQ9BVA1 445 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 FGFBP2Q9BYJ0 223 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 PPP1R12CQ9BZL4 782 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-224ENST00000641711 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 MTIF3Q9H2K0 278 aaKnown RBP11.2□□□□□ -0.62
PHGDH-224ENST00000641711 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 IL23AQ9NPF7 189 aa11.2□□□□□ -0.62
PHGDH-224ENST00000641711 ZMYND8Q9ULU4 1186 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-224ENST00000641711 TNRC18O15417 2968 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-224ENST00000641711 UBE4BO95155 1302 aa11.19□□□□□ -0.62
PHGDH-224ENST00000641711 PDXKO00764 312 aa11.19□□□□□ -0.62
PHGDH-224ENST00000641711 EIF3DO15371 548 aaKnown RBP eCLIP11.19□□□□□ -0.62
PHGDH-224ENST00000641711 KIF5CO60282 957 aa11.19□□□□□ -0.62
PHGDH-224ENST00000641711 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
PHGDH-224ENST00000641711 TBCAO75347 108 aaKnown RBP11.19□□□□□ -0.62
PHGDH-224ENST00000641711 NDUFA10O95299 355 aa11.19□□□□□ -0.62
PHGDH-224ENST00000641711 CYP2C18P33260 490 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms