RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 CAPN10Q9HC96 672 aa16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 RNF123Q5XPI4 1314 aa16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 HEG1Q9ULI3 1381 aa16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 ALKBH5Q6P6C2 394 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 RGS9BPQ6ZS82 235 aa16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 DMAP1Q9NPF5 467 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 A8MXQ7 604 aa16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 CCDC142Q17RM4 750 aa16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 NSUN6Q8TEA1 469 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 RBM41Q96IZ5 413 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-221ENST00000636012 PODXLO00592 558 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 RHOT2Q8IXI1 618 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 SYT2Q8N9I0 419 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 ELAC2Q9BQ52 826 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 KPNA7A9QM74 516 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 ZNF235Q14590 738 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 FAM102AQ5T9C2 384 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 SIX5Q8N196 739 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 CEP95Q96GE4 821 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 KIAA1586Q9HCI6 787 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 PTPRTO14522 1441 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 SUPT3HO75486 399 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 GPC5P78333 572 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 FASTKD1Q53R41 847 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 RPAP3Q9H6T3 665 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 MLXIPLQ9NP71 852 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 RNF146Q9NTX7 359 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 FBXO40Q9UH90 709 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 PRRG1O14668 218 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 MYBP10242 640 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 GFPT1Q06210 699 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 GLYCTKQ8IVS8 523 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 ZC3H15Q8WU90 426 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 PIK3R5Q8WYR1 880 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 C2orf40Q9H1Z8 148 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 ZNF229Q9UJW7 825 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 HMBSP08397 361 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 NR1D1P20393 614 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 PPP3CCP48454 512 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 ZBED6P86452 979 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 SH3BP5LQ7L8J4 393 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
CACNA1A-221ENST00000636012 STAT3P40763 770 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 GTF2H3Q13889 308 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 EFHC2Q5JST6 749 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 KRT39Q6A163 491 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 RFWD2Q8NHY2 731 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 KBTBD13C9JR72 458 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 SPAG7O75391 227 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 NR3C1P04150 777 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 CCNE1P24864 410 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 LRRC74AQ0VAA2 488 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 CEP78Q5JTW2 689 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 DEPDC1Q5TB30 811 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 SYNGAP1Q96PV0 1343 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 ATP9BO43861 1147 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 CYBBP04839 570 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 ROR1Q01973 937 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 XXYLT1Q8NBI6 393 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 DDX50Q9BQ39 737 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 TMEM260Q9NX78 707 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 POTEFA5A3E0 1075 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 ADCY3O60266 1144 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 POTEEQ6S8J3 1075 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 ADGRF4Q8IZF3 695 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 PPM1NQ8N819 430 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 UBE2Q2Q8WVN8 375 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 RUBCNLQ9H714 662 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 GPR108Q9NPR9 543 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 PCDHGB4Q9UN71 923 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 PLAAQ9Y263 795 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 SPDYE5A6NIY4 337 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 MCAMP43121 646 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 RAD51Q06609 339 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 SPDYE7PQ495Y7 208 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 ZNF746Q6NUN9 644 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 ZC3H18Q86VM9 953 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 SFR1Q86XK3 245 aa16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 RBAKQ9NYW8 714 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-221ENST00000636012 SDC4P31431 198 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 TMEM62Q0P6H9 643 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 KRT31Q15323 416 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 SLFNL1Q499Z3 407 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 COBLL1Q53SF7 1204 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 SYCP2LQ5T4T6 812 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 ARHGEF3Q9NR81 526 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 STAP1Q9ULZ2 295 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 PHLPP2Q6ZVD8 1323 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 TLR2O60603 784 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 SYTL3Q4VX76 610 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 PKN3Q6P5Z2 889 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 LINC00301Q8NCQ3 95 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 TBXAS1P24557 533 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 ST8SIA6P61647 398 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms