RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PRR29P0C7W0 189 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 STAG3L1P0CL83 205 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 WDR5P61964 334 aaKnown RBP21.48■■□□□ 1.03
CIRBP-220ENST00000588917 FAM189BP81408 668 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 ATF7IP2Q5U623 682 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 RASIP1Q5U651 963 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 SPATA20Q8TB22 786 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 SLC9A7Q96T83 725 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 ACO2Q99798 780 aaKnown RBP21.48■■□□□ 1.03
CIRBP-220ENST00000588917 ELAC1Q9H777 363 aaKnown RBP21.48■■□□□ 1.03
CIRBP-220ENST00000588917 TNFSF13BQ9Y275 285 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 PCDHA5Q9Y5H7 936 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-220ENST00000588917 ZNF623O75123 536 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 PPP1R37O75864 691 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 SARSP49591 514 aaKnown RBP21.47■■□□□ 1.03
CIRBP-220ENST00000588917 TCTN1Q2MV58 587 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 ZC2HC1CQ53FD0 456 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-220ENST00000588917 L1TD1Q5T7N2 865 aaKnown RBP21.47■■□□□ 1.03
CIRBP-220ENST00000588917 TAS1R3Q7RTX0 852 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 MAP4K3Q8IVH8 894 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 HACE1Q8IYU2 909 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 ZNF507Q8TCN5 953 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 PGBD4Q96DM1 585 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 BICD1Q96G01 975 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 TCHPQ9BT92 498 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 TRIM6Q9C030 488 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-220ENST00000588917 TTYH1Q9H313 450 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-220ENST00000588917 PCDHB7Q9Y5E2 793 aa21.47■■□□□ 1.03
CIRBP-220ENST00000588917 SCN5AQ14524 2016 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 C9IYK1 514 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 B4GALT5O43286 388 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 MGEA5O60502 916 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 TOM1L1O75674 476 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 PIGRP01833 764 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 NT5DC1Q5TFE4 455 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 SLFN12LQ6IEE8 588 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 SYCP3Q8IZU3 236 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 GPT2Q8TD30 523 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 TOP1MTQ969P6 601 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 CPB2Q96IY4 423 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 NUP62CLQ9H1M0 184 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 CLSTN2Q9H4D0 955 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 SLC39A2Q9NP94 309 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 FAM105AQ9NUU6 356 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 LRFN2Q9ULH4 789 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 UBE4BO95155 1302 aa21.46■■□□□ 1.03
CIRBP-220ENST00000588917 SIP14410 1827 aa21.45■■□□□ 1.03
CIRBP-220ENST00000588917 TMEM265A0A087WTH1 108 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 HNRNPDLO14979 420 aaKnown RBP21.45■■□□□ 1.02
CIRBP-220ENST00000588917 CLDN3O15551 220 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 MYBP10242 640 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 LIG4P49917 911 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 CAMK4Q16566 473 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 DCAF4L1Q3SXM0 396 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.45■■□□□ 1.02
CIRBP-220ENST00000588917 EPM2AIP1Q7L775 607 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-220ENST00000588917 RSPH1Q8WYR4 309 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 TARS2Q9BW92 718 aaKnown RBP21.45■■□□□ 1.02
CIRBP-220ENST00000588917 UBN1Q9NPG3 1134 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 TMEM161AQ9NX61 479 aa21.45■■□□□ 1.02
CIRBP-220ENST00000588917 CXXC1Q9P0U4 656 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-220ENST00000588917 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-220ENST00000588917 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-220ENST00000588917 HOXA2O43364 376 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 ATP2A2P16615 1042 aaKnown RBP21.44■■□□□ 1.02
CIRBP-220ENST00000588917 SNRPFP62306 86 aaKnown RBP21.44■■□□□ 1.02
CIRBP-220ENST00000588917 STK4Q13043 487 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 SKOR2Q2VWA4 1001 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-220ENST00000588917 MPZL3Q6UWV2 235 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 ECHDC2Q86YB7 292 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 NPAS4Q8IUM7 802 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 MYOCDQ8IZQ8 938 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 MAFAQ8NHW3 353 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-220ENST00000588917 LINC01599Q8WXQ3 324 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 HPS3Q969F9 1004 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 ZBED2Q9BTP6 218 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 COL25A1Q9BXS0 654 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-220ENST00000588917 PDZD7Q9H5P4 517 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 KIAA1468Q9P260 1216 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 CGNQ9P2M7 1197 aaKnown RBP21.44■■□□□ 1.02
CIRBP-220ENST00000588917 PCDHB2Q9Y5E7 798 aa21.44■■□□□ 1.02
CIRBP-220ENST00000588917 MYH11P35749 1972 aa21.43■■□□□ 1.02
CIRBP-220ENST00000588917 PRPF6O94906 941 aaKnown RBP21.43■■□□□ 1.02
CIRBP-220ENST00000588917 MCF2P10911 925 aa21.43■■□□□ 1.02
CIRBP-220ENST00000588917 PPP1R2P41236 205 aa21.43■■□□□ 1.02
CIRBP-220ENST00000588917 CASP5P51878 434 aa21.43■■□□□ 1.02
CIRBP-220ENST00000588917 KYAT1Q16773 422 aa21.43■■□□□ 1.02
CIRBP-220ENST00000588917 ZNF658Q5TYW1 1059 aaPredicted RBP21.43■■□□□ 1.02
CIRBP-220ENST00000588917 MRPL10Q7Z7H8 261 aaKnown RBP21.43■■□□□ 1.02
CIRBP-220ENST00000588917 TRIML1Q8N9V2 468 aa21.43■■□□□ 1.02
CIRBP-220ENST00000588917 MYLIPQ8WY64 445 aa21.43■■□□□ 1.02
CIRBP-220ENST00000588917 PTPRHQ9HD43 1115 aa21.43■■□□□ 1.02
CIRBP-220ENST00000588917 PROZP22891 400 aa21.42■■□□□ 1.02
CIRBP-220ENST00000588917 MATR3P43243 847 aaKnown RBP eCLIP21.42■■□□□ 1.02
CIRBP-220ENST00000588917 BMT2Q1RMZ1 405 aa21.42■■□□□ 1.02
CIRBP-220ENST00000588917 UBXN11Q5T124 520 aa21.42■■□□□ 1.02
CIRBP-220ENST00000588917 GOLGA5Q8TBA6 731 aa21.42■■□□□ 1.02
CIRBP-220ENST00000588917 SCFD1Q8WVM8 642 aa21.42■■□□□ 1.02
CIRBP-220ENST00000588917 SYAP1Q96A49 352 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms