RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 SNX21Q969T3 373 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 PRIMPOLQ96LW4 560 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 GAD1Q99259 594 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 FZD8Q9H461 694 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 NXF3Q9H4D5 531 aaKnown RBP18.36■□□□□ 0.53
SREBF1-219ENST00000580540 UBN1Q9NPG3 1134 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 KANSL3Q9P2N6 904 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 DNAJB4Q9UDY4 337 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 PARP2Q9UGN5 583 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 CLIC4Q9Y696 253 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 TTLL13PA6NNM8 815 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 SFI1A8K8P3 1242 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 GALTP07902 379 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 AKAP5P24588 427 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 MLH1P40692 756 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 NDUFV1P49821 464 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 PEX3P56589 373 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 GRIN1Q05586 938 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 DLX2Q07687 328 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-219ENST00000580540 RESTQ13127 1097 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 PTCRAQ6ISU1 281 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-219ENST00000580540 PDE12Q6L8Q7 609 aaKnown RBP18.35■□□□□ 0.53
SREBF1-219ENST00000580540 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 CALML4Q96GE6 196 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 AK8Q96MA6 479 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 KLK14Q9P0G3 267 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 VCANP13611 3396 aa18.35■□□□□ 0.53
SREBF1-219ENST00000580540 ARL5CA6NH57 179 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 TNFRSF10AO00220 468 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 ACKR2O00590 384 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 N4BP3O15049 544 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 STX6O43752 255 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 DDHD2O94830 711 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 PLA2G4BP0C869 781 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 MARCKSP29966 332 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-219ENST00000580540 LTBRP36941 435 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 SLC11A1P49279 550 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 EFNA5P52803 228 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 DMP1Q13316 513 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-219ENST00000580540 ADAM15Q13444 863 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 DHX8Q14562 1220 aaKnown RBP18.34■□□□□ 0.53
SREBF1-219ENST00000580540 FAM187BQ17R55 369 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 CTC1Q2NKJ3 1217 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 HYIQ5T013 277 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 C1orf186Q6ZWK4 172 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 TMEM173Q86WV6 379 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-219ENST00000580540 DRC1Q96MC2 740 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 ZFP42Q96MM3 310 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
SREBF1-219ENST00000580540 MTMR6Q9Y217 621 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 TTC28Q96AY4 2481 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 XIRP2A4UGR9 3374 aa18.34■□□□□ 0.53
SREBF1-219ENST00000580540 HIDE1A8MVS5 230 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 K7ERI5 159 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 FSCN2O14926 492 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 B4GALT3O60512 393 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 ALDH2P05091 517 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 IL9P15248 144 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 LONP1P36776 959 aaKnown RBP18.33■□□□□ 0.52
SREBF1-219ENST00000580540 NPTX2P47972 431 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 SCNN1GP51170 649 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 BMS1Q14692 1282 aaKnown RBP18.33■□□□□ 0.52
SREBF1-219ENST00000580540 COL19A1Q14993 1142 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 TMEM119Q4V9L6 283 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 EFHBQ8N7U6 833 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 SYT2Q8N9I0 419 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-219ENST00000580540 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 IGSF21Q96ID5 467 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 ADPGKQ9BRR6 497 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 CCDC113Q9H0I3 377 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 PDZD7Q9H5P4 517 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 KMT5AQ9NQR1 393 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 MIOSQ9NXC5 875 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 FAN1Q9Y2M0 1017 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 GIT1Q9Y2X7 761 aa18.33■□□□□ 0.52
SREBF1-219ENST00000580540 PRG3Q9Y2Y8 225 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-219ENST00000580540 NPHP3-ACAD11A0A0J9YXS1 232 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 CARNS1A5YM72 827 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 GRXCR2A6NFK2 248 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 TBX10O75333 385 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 CXCL14O95715 111 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 EDN1P05305 212 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 OR1G1P47890 313 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
SREBF1-219ENST00000580540 KARSQ15046 597 aaKnown RBP18.32■□□□□ 0.52
SREBF1-219ENST00000580540 PUS10Q3MIT2 529 aaKnown RBP18.32■□□□□ 0.52
SREBF1-219ENST00000580540 SPECC1Q5M775 1068 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-219ENST00000580540 EEF1DP3Q658K8 133 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 DAW1Q8N136 415 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 VPS52Q8N1B4 723 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 TMEM87AQ8NBN3 555 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 BCL7CQ8WUZ0 217 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-219ENST00000580540 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-219ENST00000580540 SNTG2Q9NY99 539 aa18.32■□□□□ 0.52
SREBF1-219ENST00000580540 GUCY2CP25092 1073 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 SLC12A3P55017 1021 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 RBM10P98175 930 aaKnown RBP18.31■□□□□ 0.52
SREBF1-219ENST00000580540 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms