RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 POMGNT1Q8WZA1 660 aa30.92■■■□□ 2.54
CTDNEP1-210ENST00000574322 TSGA10Q9BZW7 698 aa30.92■■■□□ 2.54
CTDNEP1-210ENST00000574322 KIAA1586Q9HCI6 787 aa30.92■■■□□ 2.54
CTDNEP1-210ENST00000574322 SLC5A4Q9NY91 659 aa30.92■■■□□ 2.54
CTDNEP1-210ENST00000574322 ADCY3O60266 1144 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 HSPA8P11142 646 aaKnown RBP30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 ANXA13P27216 316 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 CAPSQ13938 189 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 HSP90AA2PQ14568 343 aaPredicted RBP30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 IQCEQ6IPM2 695 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 GPD1LQ8N335 351 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 PARD3BQ8TEW8 1205 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 JAKMIP2Q96AA8 810 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 TINF2Q9BSI4 451 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 ERAP1Q9NZ08 941 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 PCDHA13Q9Y5I0 950 aa30.91■■■□□ 2.54
CTDNEP1-210ENST00000574322 LRRIQ4A6NIV6 560 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 K7ERI5 159 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 MARK3P27448 753 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 CTCFP49711 727 aaPredicted RBP30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 CYP27A1Q02318 531 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 MXD4Q14582 209 aaPredicted RBP30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 EPC2Q52LR7 807 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 ZNF569Q5MCW4 686 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 STK33Q9BYT3 514 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 ABHD16BQ9H3Z7 469 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 APEX2Q9UBZ4 518 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 GTF2H1P32780 548 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 EFNA5P52803 228 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 KLHL30Q0D2K2 578 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 MKRN4PQ13434 485 aaPredicted RBP30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 TDRD12Q587J7 1177 aaKnown RBP30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 MORN1Q5T089 497 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 CCDC122Q5T0U0 273 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 SLFN12LQ6IEE8 588 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 USP37Q86T82 979 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 FMNL3Q8IVF7 1028 aa30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 PRPF31Q8WWY3 499 aaKnown RBP30.9■■■□□ 2.54
CTDNEP1-210ENST00000574322 GOLGA8IPA6NC78 632 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 RCCD1A6NED2 376 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 GOLGA8JA6NMD2 632 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 PJA2O43164 708 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 LIG4P49917 911 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 CDCA2Q69YH5 1023 aaPredicted RBP30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 TXLNBQ8N3L3 684 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 VTI1AQ96AJ9 217 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 SAAL1Q96ER3 474 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 BICD1Q96G01 975 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 IFIH1Q9BYX4 1025 aaKnown RBP30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 LACRTQ9GZZ8 138 aa30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 AJAP1Q9UKB5 411 aaPredicted RBP30.89■■■□□ 2.54
CTDNEP1-210ENST00000574322 CAP1Q01518 475 aa30.88■■■□□ 2.53
CTDNEP1-210ENST00000574322 CYP24A1Q07973 514 aa30.88■■■□□ 2.53
CTDNEP1-210ENST00000574322 ARHGEF6Q15052 776 aa30.88■■■□□ 2.53
CTDNEP1-210ENST00000574322 COQ4Q9Y3A0 265 aa30.88■■■□□ 2.53
CTDNEP1-210ENST00000574322 EXTL3O43909 919 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 SLU7O95391 586 aaKnown RBP30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 LGALS2P05162 132 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 HOXD8P13378 290 aaPredicted RBP30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 ADCYAP1R1P41586 468 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 KIF5AQ12840 1032 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 DRP2Q13474 957 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 DUSP28Q4G0W2 176 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 ZNF484Q5JVG2 852 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 IQSEC1Q6DN90 963 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 NPLOC4Q8TAT6 608 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 PSPC1Q8WXF1 523 aaKnown RBP30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 TMEM117Q9H0C3 514 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 GUCA1BQ9UMX6 200 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 PPFIA4O75335 1185 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 STAT1P42224 750 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 LBX1P52954 281 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 SLC18A3Q16572 532 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 SLC35F6Q8N357 371 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 TRIM10Q9UDY6 481 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 DNAJC12Q9UKB3 198 aa30.87■■■□□ 2.53
CTDNEP1-210ENST00000574322 URI1O94763 535 aaPredicted RBP30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 HOXC6P09630 235 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 FERP16591 822 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 GCLMP48507 274 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 MXI1P50539 228 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 ACVR2BQ13705 512 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 TUBB2AQ13885 445 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 ZPBP2Q6X784 338 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 TUBB2BQ9BVA1 445 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 CCDC113Q9H0I3 377 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 TRPC6Q9Y210 931 aa30.86■■■□□ 2.53
CTDNEP1-210ENST00000574322 MAGEA1P43355 309 aa30.85■■■□□ 2.53
CTDNEP1-210ENST00000574322 CLDN10P78369 228 aa30.85■■■□□ 2.53
CTDNEP1-210ENST00000574322 GFPT1Q06210 699 aaPredicted RBP30.85■■■□□ 2.53
CTDNEP1-210ENST00000574322 LAMTOR4Q0VGL1 99 aa30.85■■■□□ 2.53
CTDNEP1-210ENST00000574322 GJB7Q6PEY0 223 aa30.85■■■□□ 2.53
CTDNEP1-210ENST00000574322 SOCS4Q8WXH5 440 aa30.85■■■□□ 2.53
CTDNEP1-210ENST00000574322 TMEM8AQ9HCN3 771 aa30.85■■■□□ 2.53
CTDNEP1-210ENST00000574322 ZNF233A6NK53 670 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 LRRIQ3A6PVS8 624 aaPredicted RBP30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 F8VZ95 297 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 SOX5P35711 763 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 MAP2K5Q13163 448 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 GJC2Q5T442 439 aaPredicted RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms