RNA–Protein interactions for RNA: ENST00000559741.5

PSME1-206, Transcript of proteasome activator subunit 1, humanhuman

TSL 3

Gene PSME1, Length 763 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-206ENST00000559741 POLD4Q9HCU8 107 aa11.05□□□□□ -0.64
PSME1-206ENST00000559741 ALG13Q9NP73 1137 aaKnown RBP11.05□□□□□ -0.64
PSME1-206ENST00000559741 KMT5AQ9NQR1 393 aa11.05□□□□□ -0.64
PSME1-206ENST00000559741 LARSQ9P2J5 1176 aaKnown RBP11.05□□□□□ -0.64
PSME1-206ENST00000559741 ARHGAP28Q9P2N2 729 aa11.05□□□□□ -0.64
PSME1-206ENST00000559741 THEGQ9P2T0 379 aa11.05□□□□□ -0.64
PSME1-206ENST00000559741 STK17AQ9UEE5 414 aa11.05□□□□□ -0.64
PSME1-206ENST00000559741 CCDC39Q9UFE4 941 aa11.05□□□□□ -0.64
PSME1-206ENST00000559741 COG5Q9UP83 839 aa11.05□□□□□ -0.64
PSME1-206ENST00000559741 GIT1Q9Y2X7 761 aa11.05□□□□□ -0.64
PSME1-206ENST00000559741 ATG2AQ2TAZ0 1938 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 CCDC169A6NNP5 214 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 SPTLC2O15270 562 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 NCK2O43639 380 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 FGF18O76093 207 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 SSBP05455 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
PSME1-206ENST00000559741 PLS3P13797 630 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 SMTNP53814 917 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 COL19A1Q14993 1142 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 TJAP1Q5JTD0 557 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 PDE12Q6L8Q7 609 aaKnown RBP11.04□□□□□ -0.64
PSME1-206ENST00000559741 USP49Q70CQ1 688 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 THNSL1Q8IYQ7 743 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 POF1BQ8WVV4 589 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 LARP4BQ92615 738 aaKnown RBP11.04□□□□□ -0.64
PSME1-206ENST00000559741 ADPGKQ9BRR6 497 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 TBC1D13Q9NVG8 400 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
PSME1-206ENST00000559741 HCSTQ9UBK5 93 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 MYH11P35749 1972 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 VCANP13611 3396 aa11.04□□□□□ -0.64
PSME1-206ENST00000559741 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.03□□□□□ -0.64
PSME1-206ENST00000559741 ARL5CA6NH57 179 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 SFI1A8K8P3 1242 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 H0YCG3 227 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 NPTXRO95502 500 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 EDN1P05305 212 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 DNAJB1P25685 340 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 ALDH7A1P49419 539 aaKnown RBP11.03□□□□□ -0.64
PSME1-206ENST00000559741 ZNF131P52739 623 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 BCAR1P56945 870 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 KRT17Q04695 432 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 RNASELQ05823 741 aaKnown RBP11.03□□□□□ -0.64
PSME1-206ENST00000559741 PKP1Q13835 747 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 BECN1Q14457 450 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 MCM6Q14566 821 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 AAK1Q2M2I8 961 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 DCAF4L1Q3SXM0 396 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 LONRF3Q496Y0 759 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 SPECC1Q5M775 1068 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 CCDC73Q6ZRK6 1079 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
PSME1-206ENST00000559741 GPBP1Q86WP2 473 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 SLC39A11Q8N1S5 342 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 MRPS27Q92552 414 aaKnown RBP11.03□□□□□ -0.64
PSME1-206ENST00000559741 HLA-CQ95604 372 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 PPP2R3CQ969Q6 453 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 TMEM175Q9BSA9 504 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 KIFC3Q9BVG8 833 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 PDZD7Q9H5P4 517 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 NRDE2Q9H7Z3 1164 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 PRDM6Q9NQX0 595 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 SPG21Q9NZD8 308 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 PUF60Q9UHX1 559 aaKnown RBP11.03□□□□□ -0.64
PSME1-206ENST00000559741 CFAP45Q9UL16 551 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 TNFSF13BQ9Y275 285 aa11.03□□□□□ -0.64
PSME1-206ENST00000559741 TNFRSF10AO00220 468 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 CUTAO60888 179 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 ZC3H11AO75152 810 aaKnown RBP eCLIP11.02□□□□□ -0.651e-7■□□□□ 9.7
PSME1-206ENST00000559741 BRD1O95696 1058 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 GALTP07902 379 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 ABCD1P33897 745 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 AFF1P51825 1210 aaKnown RBP11.02□□□□□ -0.65
PSME1-206ENST00000559741 NCKAP1LP55160 1127 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 MRPS5P82675 430 aaKnown RBP11.02□□□□□ -0.65
PSME1-206ENST00000559741 RAD51AP2Q09MP3 1159 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 GIT2Q14161 759 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 TMEM132AQ24JP5 1023 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 TCEAL5Q5H9L2 206 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 NT5DC1Q5TFE4 455 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 ATF7IP2Q5U623 682 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 RRAGBQ5VZM2 374 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 TAS1R3Q7RTX0 852 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 CDR2LQ86X02 465 aaPredicted RBP11.02□□□□□ -0.65
PSME1-206ENST00000559741 TMEM161BQ8NDZ6 487 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 KCNG4Q8TDN1 519 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 ACO2Q99798 780 aaKnown RBP11.02□□□□□ -0.65
PSME1-206ENST00000559741 REEP2Q9BRK0 252 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 MRPL4Q9BYD3 311 aaKnown RBP11.02□□□□□ -0.65
PSME1-206ENST00000559741 NXF3Q9H4D5 531 aaKnown RBP11.02□□□□□ -0.65
PSME1-206ENST00000559741 PARVGQ9HBI0 331 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 PTPRHQ9HD43 1115 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 TLR9Q9NR96 1032 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 STK39Q9UEW8 545 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 INPP5FQ9Y2H2 1132 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 HES2Q9Y543 173 aa11.02□□□□□ -0.65
PSME1-206ENST00000559741 NPHP3-ACAD11A0A0J9YXS1 232 aa11.01□□□□□ -0.65
PSME1-206ENST00000559741 FSD2A1L4K1 749 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms