RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	RPTOR	Q8N122	1335 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	FAM171A2	A8MVW0	826 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085		H0Y858	1186 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	AKR1B10	O60218	316 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	TMEM127	O75204	238 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	FSBP	O95073	299 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	RPLP2	P05387	115 aa	Known RBP	4.99	□□□□□ -1.61
RDX-208	ENST00000530085	COL6A1	P12109	1028 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	CTSS	P25774	331 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	HTR3A	P46098	478 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	RAP1GAP	P47736	663 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	MLLT6	P55198	1093 aa	Predicted RBP	4.99	□□□□□ -1.61
RDX-208	ENST00000530085	FAM193A	P78312	1265 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	MEF2A	Q02078	507 aa	Predicted RBP	4.99	□□□□□ -1.61
RDX-208	ENST00000530085	SEMA5A	Q13591	1074 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	SEPT2	Q15019	361 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	UBE3C	Q15386	1083 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	KIAA0753	Q2KHM9	967 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	LONRF3	Q496Y0	759 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	ANO6	Q4KMQ2	910 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	PPP4R3A	Q6IN85	833 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	DARS2	Q6PI48	645 aa	Known RBP	4.99	□□□□□ -1.61
RDX-208	ENST00000530085	TTC7B	Q86TV6	843 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
RDX-208	ENST00000530085	KAT5	Q92993	513 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	C20orf173	Q96LM9	149 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	ELAC2	Q9BQ52	826 aa	Known RBP	4.99	□□□□□ -1.61
RDX-208	ENST00000530085	SGPP1	Q9BX95	441 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	B3GNT5	Q9BYG0	378 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	EPB41L4B	Q9H329	900 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	NSUN3	Q9H649	340 aa	Known RBP	4.99	□□□□□ -1.61
RDX-208	ENST00000530085	KCNK12	Q9HB15	430 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.99	□□□□□ -1.61
RDX-208	ENST00000530085	KMT5A	Q9NQR1	393 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	FAM53C	Q9NYF3	392 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	CDC42EP3	Q9UKI2	254 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	PHTF1	Q9UMS5	762 aa		4.99	□□□□□ -1.61
RDX-208	ENST00000530085	PHF2	O75151	1096 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	TSPAN15	O95858	294 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	LTA4H	P09960	611 aa	Known RBP	4.98	□□□□□ -1.61
RDX-208	ENST00000530085	GAA	P10253	952 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	SLC5A1	P13866	664 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
RDX-208	ENST00000530085	IL13	P35225	146 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	IL12RB1	P42701	662 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	MAP2K6	P52564	334 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	EPHB3	P54753	998 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	GJA9	P57773	515 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	SMAD4	Q13485	552 aa	Known RBP	4.98	□□□□□ -1.61
RDX-208	ENST00000530085	C19orf54	Q5BKX5	351 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	GJC2	Q5T442	439 aa	Predicted RBP	4.98	□□□□□ -1.61
RDX-208	ENST00000530085	THEMIS2	Q5TEJ8	643 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	RNF220	Q5VTB9	566 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	ABHD15	Q6UXT9	468 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	PRR23B	Q6ZRT6	265 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	MORC1	Q86VD1	984 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	FAM129C	Q86XR2	697 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	RHOT1	Q8IXI2	618 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	DRC7	Q8IY82	874 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	KLHDC4	Q8TBB5	520 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	NSUN6	Q8TEA1	469 aa	Known RBP	4.98	□□□□□ -1.61
RDX-208	ENST00000530085	PARD3B	Q8TEW8	1205 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	SNX33	Q8WV41	574 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	HOXB13	Q92826	284 aa	Predicted RBP	4.98	□□□□□ -1.61
RDX-208	ENST00000530085	ZBTB8A	Q96BR9	441 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	DMRTA2	Q96SC8	542 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	ARPC5L	Q9BPX5	153 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	BHMT2	Q9H2M3	363 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	GCM1	Q9NP62	436 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	KLHL11	Q9NVR0	708 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.98	□□□□□ -1.61
RDX-208	ENST00000530085	STXBP5L	Q9Y2K9	1186 aa		4.98	□□□□□ -1.61
RDX-208	ENST00000530085		A0A088AWK7	358 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	CAPN8	A6NHC0	703 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	GOLIM4	O00461	696 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	SLC16A6	O15403	523 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	DAPK3	O43293	454 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	SGTA	O43765	313 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	SEMA7A	O75326	666 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	FTL	P02792	175 aa	Predicted RBP	4.97	□□□□□ -1.61
RDX-208	ENST00000530085	INHBB	P09529	407 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	POLD1	P28340	1107 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	ADSL	P30566	484 aa	Predicted RBP	4.97	□□□□□ -1.61
RDX-208	ENST00000530085	LIMS1	P48059	325 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	CACNB3	P54284	484 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	AK2	P54819	239 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	TOP3A	Q13472	1001 aa	Predicted RBP	4.97	□□□□□ -1.61
RDX-208	ENST00000530085	PRR31	Q5SQ13	230 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	TRIM68	Q6AZZ1	485 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085		Q6ZVL8	140 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	TAS1R1	Q7RTX1	841 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	DAAM2	Q86T65	1068 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	UNC5B	Q8IZJ1	945 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	SPICE1	Q8N0Z3	855 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	PIK3C3	Q8NEB9	887 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	GJA10	Q969M2	543 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	IL17RA	Q96F46	866 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	CDK5RAP3	Q96JB5	506 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	TAGLN3	Q9UI15	199 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	SIK3	Q9Y2K2	1263 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 274.6 ms