RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MYO1AQ9UBC5 1043 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ADD3Q9UEY8 706 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 RPS6KA6Q9UK32 745 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ATXN7L1Q9ULK2 861 aaPredicted RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 SYNPO2Q9UMS6 1093 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 PCDHA13Q9Y5I0 950 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ATP23Q9Y6H3 246 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 IGF1RP08069 1367 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 SENP3-EIF4A1A0A087X0R7 540 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 A0A0B4J269 797 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 NPHP3-ACAD11A0A0J9YXS1 232 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 TCRBV5S4A2TA0A5A2 114 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 HMX3A6NHT5 357 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 LRRC14BA6NHZ5 514 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 MYO1FO00160 1098 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 SIGLEC6O43699 453 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 HTATSF1O43719 755 aaKnown RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 MYO1BO43795 1136 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 SIN3BO75182 1162 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 APOL3O95236 402 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 TNFRSF6BO95407 300 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 GNAT1P11488 350 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 PAMP19021 973 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 HPDP32754 393 aaPredicted RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 HOXD13P35453 343 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 ADH7P40394 386 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 BCL6P41182 706 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 TUSC3Q13454 348 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 TSTQ16762 297 aaKnown RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 C3orf38Q5JPI3 329 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 SLC9C2Q5TAH2 1124 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 ACAD10Q6JQN1 1059 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 LETMD1Q6P1Q0 360 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 FBXO38Q6PIJ6 1188 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 CRTC3Q6UUV7 619 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 BEND5Q7L4P6 421 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 TMC6Q7Z403 805 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 WAPLQ7Z5K2 1190 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 CREG2Q8IUH2 290 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 SIAH1Q8IUQ4 282 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 NOSTRINQ8IVI9 506 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 HERC6Q8IVU3 1022 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 PLD6Q8N2A8 252 aaKnown RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 ADAMTS15Q8TE58 950 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 ST8SIA4Q92187 359 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZNF622Q969S3 477 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 MTFMTQ96DP5 389 aaKnown RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 MIPEPQ99797 713 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 PTPN18Q99952 460 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 BRIP1Q9BX63 1249 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 AGXT2Q9BYV1 514 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 KIAA1683Q9H0B3 1180 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 KCTD10Q9H3F6 313 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 ATXN3LQ9H3M9 355 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 TMOD4Q9NZQ9 345 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 USP36Q9P275 1121 aaKnown RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 MTRRQ9UBK8 725 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 SRP68Q9UHB9 627 aaKnown RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 FEM1BQ9UK73 627 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 MAFFQ9ULX9 164 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 SCAF8Q9UPN6 1271 aaKnown RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 PA2G4Q9UQ80 394 aaKnown RBP4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 PCDHA3Q9Y5H8 950 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 RUSC2Q8N2Y8 1516 aa4.45□□□□□ -1.7
RNU4-60P-201ENST00000517239 CCDC196A0A1B0GTZ2 297 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 hCG_1807616A0A1W2PRN6 198 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 RNF225M0QZC1 329 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 GPR25O00155 361 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ELL2O00472 640 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CHL1O00533 1208 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 DLL1O00548 723 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PODXLO00592 558 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 MAN2B1O00754 1011 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 C2CD2LO14523 706 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 AP3D1O14617 1153 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CPLX1O14810 134 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PIP5K1BO14986 540 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PTP4A3O75365 173 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TGDSO95455 350 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TPM2P07951 284 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 JUPP14923 745 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 GSPT1P15170 499 aaKnown RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PORP16435 677 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ALAS2P22557 587 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ETV3P41162 512 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 STAT5AP42229 794 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 BAG6P46379 1132 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CTCFP49711 727 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PDE6CP51160 858 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 IFI35P80217 286 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 UBE3AQ05086 875 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CALD1Q05682 793 aaKnown RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CUL4BQ13620 913 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 SCARB2Q14108 478 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 RASA2Q15283 850 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 EPHA7Q15375 998 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TTC31Q49AM3 519 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 EXOSC6Q5RKV6 272 aaKnown RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CYP4F22Q6NT55 531 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 KLHDC10Q6PID8 442 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms