RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 RETREG2Q8NC44 543 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 TMEM161BQ8NDZ6 487 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 HPS3Q969F9 1004 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 ITPKCQ96DU7 683 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 TUBGCP2Q9BSJ2 902 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 NFKBIZQ9BYH8 718 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 XPNPEP1Q9NQW7 623 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 PDGFCQ9NRA1 345 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 DMAC2Q9NW81 257 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 ARHGAP28Q9P2N2 729 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 ZHX1Q9UKY1 873 aaPredicted RBP9.98□□□□□ -0.81
NR1I3-230ENST00000511944 DAAM1Q9Y4D1 1078 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 ZMYM2Q9UBW7 1377 aa9.98□□□□□ -0.81
NR1I3-230ENST00000511944 DUSP11O75319 330 aaKnown RBP9.97□□□□□ -0.81
NR1I3-230ENST00000511944 F2P00734 622 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 MMP3P08254 477 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 MYBP10242 640 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 TIMP2P16035 220 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 NR2F2P24468 414 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 HOXD13P35453 343 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 SOX11P35716 441 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 ARL2P36404 184 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 NPTX2P47972 431 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 KCNJ6P48051 423 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 CDC42EP1Q00587 391 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 LRRC41Q15345 812 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 MTERF2Q49AM1 385 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 FIGNQ5HY92 759 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 PPP1R26Q5T8A7 1209 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-230ENST00000511944 FAM102BQ5T8I3 360 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 DRC7Q8IY82 874 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 GLIS3Q8NEA6 775 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 OR6J1Q8NGC5 347 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 PSPC1Q8WXF1 523 aaKnown RBP9.97□□□□□ -0.81
NR1I3-230ENST00000511944 GLMNQ92990 594 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 ERO1AQ96HE7 468 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 UCN2Q96RP3 112 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 ERGIC2Q96RQ1 377 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 C16orf70Q9BSU1 422 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 KATNAL1Q9BW62 490 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 FGFBP2Q9BYJ0 223 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 POLR3FQ9H1D9 316 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-230ENST00000511944 C2orf40Q9H1Z8 148 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 KMT5AQ9NQR1 393 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 INTS13Q9NVM9 706 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 TBC1D7Q9P0N9 293 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.97□□□□□ -0.81
NR1I3-230ENST00000511944 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
NR1I3-230ENST00000511944 MGAMO43451 1857 aa9.96□□□□□ -0.81
NR1I3-230ENST00000511944 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 ZBTB42B2RXF5 422 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 H3BRB1 525 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 N4BP3O15049 544 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 ST8SIA5O15466 376 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 TGFB1I1O43294 461 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 NR3C1P04150 777 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 RPLP2P05387 115 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 TPM1P09493 284 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 EPB41P11171 864 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 CYBAP13498 195 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 NMT1P30419 496 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 PSMC2P35998 433 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 MTIF2P46199 727 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 PEX3P56589 373 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 WDR4P57081 412 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 TBX2Q13207 712 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 ADAM9Q13443 819 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 TFDP1Q14186 410 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 FKBP15Q5T1M5 1219 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 CDCA2Q69YH5 1023 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 TLK2Q86UE8 772 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 TRIM59Q8IWR1 403 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 CCDC112Q8NEF3 446 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 AFG1LQ8WV93 481 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 CCDC51Q96ER9 411 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 NAP1L5Q96NT1 182 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 ZIC5Q96T25 663 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 NUP58Q9BVL2 599 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 EDEM3Q9BZQ6 932 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 AP5M1Q9H0R1 490 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 UPF3AQ9H1J1 476 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 TUT1Q9H6E5 874 aaKnown RBP9.96□□□□□ -0.82
NR1I3-230ENST00000511944 KIAA1586Q9HCI6 787 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 AGPAT3Q9NRZ7 376 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 FLRT1Q9NZU1 646 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 TBX20Q9UMR3 447 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 FRMD4BQ9Y2L6 1034 aa9.96□□□□□ -0.82
NR1I3-230ENST00000511944 SFI1A8K8P3 1242 aa9.95□□□□□ -0.82
NR1I3-230ENST00000511944 PMM2O15305 246 aa9.95□□□□□ -0.82
NR1I3-230ENST00000511944 SEPT4O43236 478 aa9.95□□□□□ -0.82
NR1I3-230ENST00000511944 AOC2O75106 756 aa9.95□□□□□ -0.82
NR1I3-230ENST00000511944 PRPF6O94906 941 aaKnown RBP9.95□□□□□ -0.82
NR1I3-230ENST00000511944 C22orf31O95567 290 aa9.95□□□□□ -0.82
NR1I3-230ENST00000511944 CYP2B6P20813 491 aa9.95□□□□□ -0.82
NR1I3-230ENST00000511944 GARTP22102 1010 aa9.95□□□□□ -0.82
NR1I3-230ENST00000511944 TMOD1P28289 359 aa9.95□□□□□ -0.82
NR1I3-230ENST00000511944 CST5P28325 142 aaPredicted RBP9.95□□□□□ -0.82
NR1I3-230ENST00000511944 FLT3LGP49771 235 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms