RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 MTCL1Q9Y4B5 1905 aaKnown RBP20.08■□□□□ 0.81
CLDND1-217ENST00000508071 M0R2N6 131 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 ERLIN2O94905 339 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 P4HBP07237 508 aaKnown RBP20.08■□□□□ 0.81
CLDND1-217ENST00000508071 MYBP10242 640 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 PPP2R5CQ13362 524 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 GALNT17Q6IS24 598 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 COLGALT2Q8IYK4 626 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 ZNF579Q8NAF0 562 aaKnown RBP20.08■□□□□ 0.81
CLDND1-217ENST00000508071 TCP11Q8WWU5 503 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 SMG7Q92540 1137 aaKnown RBP20.08■□□□□ 0.81
CLDND1-217ENST00000508071 NXPE3Q969Y0 559 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 SEMA4AQ9H3S1 761 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 RXFP1Q9HBX9 757 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 BMP2KQ9NSY1 1161 aaPredicted RBP20.08■□□□□ 0.81
CLDND1-217ENST00000508071 CA14Q9ULX7 337 aa20.08■□□□□ 0.81
CLDND1-217ENST00000508071 DMXL1Q9Y485 3027 aa20.08■□□□□ 0.8
CLDND1-217ENST00000508071 FRYLO94915 3013 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 KRBA1A5PL33 1030 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 ASAP2O43150 1006 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 SLC37A4O43826 429 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 GAS2O43903 313 aaKnown RBP20.07■□□□□ 0.8
CLDND1-217ENST00000508071 NR1I2O75469 434 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 RFPL2O75678 378 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 DEXIO95424 95 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 SRFP11831 508 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 EVCP57679 992 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 INF2Q27J81 1249 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 KIAA0319Q5VV43 1072 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 SLC44A3Q8N4M1 653 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 RNF149Q8NC42 400 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 DAGLBQ8NCG7 672 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 SMG8Q8ND04 991 aaKnown RBP20.07■□□□□ 0.8
CLDND1-217ENST00000508071 FAM20AQ96MK3 541 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 MYADMQ96S97 322 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 TBC1D17Q9HA65 648 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 PIDD1Q9HB75 910 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 VAV3Q9UKW4 847 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 IPPQ9Y573 584 aa20.07■□□□□ 0.8
CLDND1-217ENST00000508071 ARL5CA6NH57 179 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 CPLX1O14810 134 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 LMNAP02545 664 aaKnown RBP20.06■□□□□ 0.8
CLDND1-217ENST00000508071 DSG1Q02413 1049 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 NCBP1Q09161 790 aaKnown RBP20.06■□□□□ 0.8
CLDND1-217ENST00000508071 EMC2Q15006 297 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 OTUD6AQ7L8S5 288 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 KRT25Q7Z3Z0 450 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 FERMT3Q86UX7 667 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 FAM177A1Q8N128 213 aaPredicted RBP20.06■□□□□ 0.8
CLDND1-217ENST00000508071 HDAC7Q8WUI4 952 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 GAD1Q99259 594 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 PLEKHA4Q9H4M7 779 aa20.06■□□□□ 0.8
CLDND1-217ENST00000508071 SPATA31D3P0C874 917 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 AXLP30530 894 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 YWHABP31946 246 aaKnown RBP20.05■□□□□ 0.8
CLDND1-217ENST00000508071 MLH1P40692 756 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 PCBP1Q15365 356 aaKnown RBP eCLIP20.05■□□□□ 0.8
CLDND1-217ENST00000508071 NOTUMQ6P988 496 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 SPATA31D4Q6ZUB0 917 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 PALB2Q86YC2 1186 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 RNF168Q8IYW5 571 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-217ENST00000508071 ZNF707Q96C28 371 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-217ENST00000508071 CCDC51Q96ER9 411 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 LXNQ9BS40 222 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 COLEC11Q9BWP8 271 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 EIF2AQ9BY44 585 aaKnown RBP20.05■□□□□ 0.8
CLDND1-217ENST00000508071 RNF39Q9H2S5 420 aa20.05■□□□□ 0.8
CLDND1-217ENST00000508071 WRAP73Q9P2S5 460 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-217ENST00000508071 ARID2Q68CP9 1835 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 MARCH6O60337 910 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 EFEMP2O95967 443 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 C1RP00736 705 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 SCNN1GP51170 649 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 DSC1Q08554 894 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 NPY5RQ15761 445 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 SPECC1Q5M775 1068 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 CENPQQ7L2Z9 268 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-217ENST00000508071 C4orf19Q8IY42 314 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 GPR152Q8TDT2 470 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 RIN2Q8WYP3 895 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-217ENST00000508071 MTRQ99707 1265 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 NT5C3AQ9H0P0 336 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 KCNMB3Q9NPA1 279 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLDND1-217ENST00000508071 ZDHHC7Q9NXF8 308 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLDND1-217ENST00000508071 R4GN57 208 aa20.04■□□□□ 0.8
CLDND1-217ENST00000508071 CCDC194A0A1B0GVG4 234 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 F8W810 466 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 TSPAN1O60635 241 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 EPHA7Q15375 998 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 XKR9Q5GH70 373 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 PHLDB3Q6NSJ2 640 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 CPLX2Q6PUV4 134 aaKnown RBP20.03■□□□□ 0.8
CLDND1-217ENST00000508071 GET4Q7L5D6 327 aaPredicted RBP20.03■□□□□ 0.8
CLDND1-217ENST00000508071 HACE1Q8IYU2 909 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 CPB2Q96IY4 423 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 ZFP42Q96MM3 310 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 APOL6Q9BWW8 343 aa20.03■□□□□ 0.8
CLDND1-217ENST00000508071 TRIM6Q9C030 488 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms