RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TUBA3CQ13748 450 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 IQSEC1Q6DN90 963 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 MFSD5Q6N075 450 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 TUBA3EQ6PEY2 450 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 XYLT1Q86Y38 959 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 TSPEARQ8WU66 669 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 LMBR1Q8WVP7 490 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 ST8SIA2Q92186 375 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 IL17RAQ96F46 866 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 MNTQ99583 582 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 ZNF703Q9H7S9 590 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 C14orf119Q9NWQ9 140 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 ZMYM3Q14202 1370 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 XDHP47989 1333 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 GOLGA8AA7E2F4 631 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 GRXCR1A8MXD5 290 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 GPR39O43194 453 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 BRINP1O60477 761 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 RPS6KA4O75676 772 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 IPO13O94829 963 aaKnown RBP4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 CTSSP25774 331 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 SRSF2Q01130 221 aaKnown RBP4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 MRPL49Q13405 166 aaKnown RBP4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 CSRP2Q16527 193 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 ANKS6Q68DC2 871 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 HTR3DQ70Z44 454 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 KRT26Q7Z3Y9 468 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 FBXO18Q8NFZ0 1043 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 MDM1Q8TC05 714 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 RSAD2Q8WXG1 361 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 ACAP3Q96P50 834 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 SORCS2Q96PQ0 1159 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 CPPED1Q9BRF8 314 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 PCED1AQ9H1Q7 454 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 MMRN2Q9H8L6 949 aa4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 AURKAIP1Q9NWT8 199 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P29-201ENST00000505659 WNT10BO00744 389 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 DNAJC6O75061 913 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 MFAP3LO75121 409 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 ITGA10O75578 1167 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 GZMKP49863 264 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 TOR2AQ5JU69 321 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 APBB1IPQ7Z5R6 666 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 GLB1L3Q8NCI6 653 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 SNX33Q8WV41 574 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 CEP95Q96GE4 821 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 DMRT3Q9NQL9 472 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 PARPBPQ9NWS1 579 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 GPRC5BQ9NZH0 403 aa4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 REXO2Q9Y3B8 237 aaKnown RBP4.77□□□□□ -1.65
HMGB1P29-201ENST00000505659 CYR61O00622 381 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 GYPEP15421 78 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 NR4A1P22736 598 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 ADSLP30566 484 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 GPR3P46089 330 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 WNT3AP56704 352 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 ABHD18Q0P651 414 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 RABL3Q5HYI8 236 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 PRAMEF14Q5SWL7 426 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 USP51Q70EK9 711 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 KCNK18Q7Z418 384 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 REPS2Q8NFH8 660 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 OR52N2Q8NGI0 321 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 ATL2Q8NHH9 583 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 WDR66Q8TBY9 1149 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 ZNF483Q8TF39 744 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 CLIP3Q96DZ5 547 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 AHCYL2Q96HN2 611 aaKnown RBP4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 RAX2Q96IS3 184 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 MRIQ9BWK5 157 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 CCM2LQ9NUG4 571 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 GPRC5DQ9NZD1 345 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 TRPS1Q9UHF7 1281 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 SORCS3Q9UPU3 1222 aa4.76□□□□□ -1.65
HMGB1P29-201ENST00000505659 GOLGA6L6A8MZA4 724 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 CLSTN1O94985 981 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 OSMP13725 252 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 ZFP36P26651 326 aaKnown RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 APOBEC3AP31941 199 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 MEF2AQ02078 507 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 APBA1Q02410 837 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 FHL2Q14192 279 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 ADRM1Q16186 407 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 MUM1Q2TAK8 710 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 C19orf54Q5BKX5 351 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 DCAF17Q5H9S7 520 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 MFSD14BQ5SR56 506 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 NAIF1Q69YI7 327 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 SPATS2Q86XZ4 545 aaKnown RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 RNF169Q8NCN4 708 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 CPT1CQ8TCG5 803 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 ZNF480Q8WV37 535 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 NEU4Q8WWR8 484 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 AUTS2Q8WXX7 1259 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 RIN2Q8WYP3 895 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 LARP4BQ92615 738 aaKnown RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 ORAI2Q96SN7 254 aa4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 CDC5LQ99459 802 aaKnown RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 ZNF768Q9H5H4 540 aaKnown RBP4.75□□□□□ -1.65
HMGB1P29-201ENST00000505659 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms