RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 PPFIA1Q13136 1202 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 PTPROQ16827 1216 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 C1orf220Q5T0J3 134 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 ZNF746Q6NUN9 644 aaPredicted RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 ANO5Q75V66 913 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 MREGQ8N565 214 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 NSUN6Q8TEA1 469 aaKnown RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 WHAMMQ8TF30 809 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 CASKIN2Q8WXE0 1202 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 SENP7Q9BQF6 1050 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 MOV10L1Q9BXT6 1211 aaKnown RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 TEX13BQ9BXU2 312 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 GOLGA6AQ9NYA3 693 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 HOXC10Q9NYD6 342 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 NOC2LQ9Y3T9 749 aaKnown RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 PCDHA10Q9Y5I2 948 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 SNCAIPQ9Y6H5 919 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 DICER1Q9UPY3 1922 aaKnown RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 RPS6KA5O75582 802 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 STBD1O95210 358 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 ABCB4P21439 1286 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 PLA2G4FQ68DD2 849 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 NLRX1Q86UT6 975 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 FAM76AQ8TAV0 307 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 HVCN1Q96D96 273 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 SEPT11Q9NVA2 429 aaKnown RBP15.98■□□□□ 0.15
CHTOP-206ENST00000495554 TMOD4Q9NZQ9 345 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 USP20Q9Y2K6 914 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 MXI1P50539 228 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 DMP1Q13316 513 aaPredicted RBP15.98■□□□□ 0.15
CHTOP-206ENST00000495554 PLEKHA4Q9H4M7 779 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 TTC7AQ9ULT0 858 aaPredicted RBP15.98■□□□□ 0.15
CHTOP-206ENST00000495554 TBX20Q9UMR3 447 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 DIS3Q9Y2L1 958 aaKnown RBP15.98■□□□□ 0.15
CHTOP-206ENST00000495554 KIAA1217Q5T5P2 1943 aa15.98■□□□□ 0.15
CHTOP-206ENST00000495554 KRIT1O00522 736 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 SART1O43290 800 aaKnown RBP15.97■□□□□ 0.15
CHTOP-206ENST00000495554 ZNF862O60290 1169 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 PEX10O60683 326 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 FAM153BP0C7A2 387 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 FAM153CQ494X1 144 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 OTUD6AQ7L8S5 288 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 ARHGEF19Q8IW93 802 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 TMEM161BQ8NDZ6 487 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 AP1M1Q9BXS5 423 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 THAP2Q9H0W7 228 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 ISCUQ9H1K1 167 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 TAF1DQ9H5J8 278 aaPredicted RBP15.97■□□□□ 0.15
CHTOP-206ENST00000495554 ACAD9Q9H845 621 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 CWC15Q9P013 229 aaKnown RBP15.97■□□□□ 0.15
CHTOP-206ENST00000495554 FAM153AQ9UHL3 310 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 SBF1O95248 1867 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 CCDC169A6NNP5 214 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 NPTX2P47972 431 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 CUL1Q13616 776 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 VGLL4Q14135 290 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 SNRNP35Q16560 246 aaKnown RBP15.97■□□□□ 0.15
CHTOP-206ENST00000495554 PALB2Q86YC2 1186 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 MAP4K3Q8IVH8 894 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 RHOT2Q8IXI1 618 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 ZSWIM2Q8NEG5 633 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 PLEKHO2Q8TD55 490 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 NTPCRQ9BSD7 190 aaKnown RBP15.97■□□□□ 0.15
CHTOP-206ENST00000495554 TMEM117Q9H0C3 514 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 C17orf75Q9HAS0 396 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 TAS2R14Q9NYV8 317 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 CEP83Q9Y592 693 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 IGSF9BQ9UPX0 1349 aa15.97■□□□□ 0.15
CHTOP-206ENST00000495554 WDR81Q562E7 1941 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
CHTOP-206ENST00000495554 IVLP07476 585 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 TREML2Q5T2D2 321 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 IQCKQ8N0W5 287 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 OTUD6BQ8N6M0 293 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 KIFAP3Q92845 792 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 MYPNQ86TC9 1320 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 CNGA1P29973 690 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 ADSSP30520 456 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 HADHBP55084 474 aaKnown RBP15.96■□□□□ 0.15
CHTOP-206ENST00000495554 SPIRE2Q8WWL2 714 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 ATP6V0A1Q93050 837 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 ARHGEF26Q96DR7 871 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 SLITRK6Q9H5Y7 841 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 EFCC1Q9HA90 598 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 SRCAPQ6ZRS2 3230 aa15.96■□□□□ 0.15
CHTOP-206ENST00000495554 ADRB2P07550 413 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 ERVK-9P63128 1117 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 FSTL1Q12841 308 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 CFAP58Q5T655 872 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 CBWD2Q8IUF1 395 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 SLC20A1Q8WUM9 679 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 ZIM3Q96PE6 472 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 CARD9Q9H257 536 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 KMT5AQ9NQR1 393 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 GABBR1Q9UBS5 961 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 PFASO15067 1338 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 DENND3A2RUS2 1198 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 GOLGA8IPA6NC78 632 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 GOLGA8JA6NMD2 632 aa15.95■□□□□ 0.14
CHTOP-206ENST00000495554 SPATA31C2B4DYI2 1134 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms