RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 TRIM24O15164 1050 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 DNAJC6O75061 913 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 PPFIA4O75335 1185 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 RPS6KA4O75676 772 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 RECQL4O94761 1208 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 CFBP00751 764 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 GYS2P54840 703 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 PURAQ00577 322 aaKnown RBP4.72□□□□□ -1.65
NF1-213ENST00000489712 STRN3Q13033 797 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 MRPL49Q13405 166 aaKnown RBP4.72□□□□□ -1.65
NF1-213ENST00000489712 TRIM25Q14258 630 aaKnown RBP4.72□□□□□ -1.65
NF1-213ENST00000489712 PITRM1Q5JRX3 1037 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 METTL24Q5JXM2 366 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 DDX46Q7L014 1031 aaKnown RBP4.72□□□□□ -1.65
NF1-213ENST00000489712 DOK3Q7L591 496 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 FAM83AQ86UY5 434 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 LYSMD2Q8IV50 215 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 ZNF276Q8N554 614 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 LARP4BQ92615 738 aaKnown RBP4.72□□□□□ -1.65
NF1-213ENST00000489712 PAWRQ96IZ0 340 aaKnown RBP4.72□□□□□ -1.65
NF1-213ENST00000489712 FAM193BQ96PV7 902 aaPredicted RBP4.72□□□□□ -1.65
NF1-213ENST00000489712 PRRX2Q99811 253 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 CPEB1Q9BZB8 566 aaKnown RBP4.72□□□□□ -1.65
NF1-213ENST00000489712 GPRC5BQ9NZH0 403 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 TRPS1Q9UHF7 1281 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 SORCS3Q9UPU3 1222 aa4.72□□□□□ -1.65
NF1-213ENST00000489712 TMEM127O75204 238 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 ENPP1P22413 925 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 VPS72Q15906 364 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 FSCN1Q16658 493 aaKnown RBP4.71□□□□□ -1.66
NF1-213ENST00000489712 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.71□□□□□ -1.66
NF1-213ENST00000489712 LRRC55Q6ZSA7 311 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 MRGPRGQ86SM5 289 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 LDLRAD3Q86YD5 345 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 SLC41A1Q8IVJ1 513 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 CLRN3Q8NCR9 226 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 OR52N2Q8NGI0 321 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 CPT1CQ8TCG5 803 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 HAS1Q92839 578 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 CDC5LQ99459 802 aaKnown RBP4.71□□□□□ -1.66
NF1-213ENST00000489712 CAAP1Q9H8G2 361 aa4.71□□□□□ -1.66
NF1-213ENST00000489712 EIF2B4Q9UI10 523 aaKnown RBP4.71□□□□□ -1.66
NF1-213ENST00000489712 A0A087X1B8 175 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 TLDC2A0PJX2 215 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 GRXCR1A8MXD5 290 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 PRR5-ARHGAP8B1AHC4 643 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 SCAF4O95104 1147 aaKnown RBP4.7□□□□□ -1.66
NF1-213ENST00000489712 LPLP06858 475 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 HSP90B1P14625 803 aaKnown RBP4.7□□□□□ -1.66
NF1-213ENST00000489712 HSD3B2P26439 372 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 ID4P47928 161 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 LGALS4P56470 323 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 UBE3CQ15386 1083 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 UGT8Q16880 541 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 CT83Q5H943 113 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 CT47A1Q5JQC4 288 aaPredicted RBP4.7□□□□□ -1.66
NF1-213ENST00000489712 IQSEC1Q6DN90 963 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 CHAC2Q8WUX2 184 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 ZNF480Q8WV37 535 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 LENG9Q96B70 501 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 CEP89Q96ST8 783 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 LSM14BQ9BX40 385 aaKnown RBP4.7□□□□□ -1.66
NF1-213ENST00000489712 PRDM12Q9H4Q4 367 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 TOPORSQ9NS56 1045 aaPredicted RBP4.7□□□□□ -1.66
NF1-213ENST00000489712 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.7□□□□□ -1.66
NF1-213ENST00000489712 CLCA2Q9UQC9 943 aa4.7□□□□□ -1.66
NF1-213ENST00000489712 B5MCH6 92 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 BRINP1O60477 761 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 INHBEP58166 350 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 PDCD1Q15116 288 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 C19orf54Q5BKX5 351 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 GJC2Q5T442 439 aaPredicted RBP4.69□□□□□ -1.66
NF1-213ENST00000489712 SDE2Q6IQ49 451 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 PDZD4Q76G19 769 aaPredicted RBP4.69□□□□□ -1.66
NF1-213ENST00000489712 ZNF627Q7L945 461 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 MRGPREQ86SM8 312 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 SNX33Q8WV41 574 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 RAX2Q96IS3 184 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 KCNH6Q9H252 994 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 IKZF4Q9H2S9 585 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 GPRC5DQ9NZD1 345 aa4.69□□□□□ -1.66
NF1-213ENST00000489712 TMEM191CA6NGB0 347 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 RAMP2O60895 175 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 ITGA10O75578 1167 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 ABHD16AO95870 558 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 GASTP01350 101 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 ITGB1P05556 798 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 CPEP16870 476 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 CTSSP25774 331 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 APOBEC3AP31941 199 aaPredicted RBP4.68□□□□□ -1.66
NF1-213ENST00000489712 APBA1Q02410 837 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 KCNV1Q6PIU1 500 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 ABHD15Q6UXT9 468 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 RHOUQ7L0Q8 258 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 ULK2Q8IYT8 1036 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 UBR7Q8N806 425 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 EAF2Q96CJ1 260 aaPredicted RBP4.68□□□□□ -1.66
NF1-213ENST00000489712 NDC1Q9BTX1 674 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 SLC46A2Q9BY10 475 aa4.68□□□□□ -1.66
NF1-213ENST00000489712 DPP7Q9UHL4 492 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms