RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 PEX10O60683 326 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
TTC3-219ENST00000485402 DRD4P21917 467 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 SLC29A2Q14542 456 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 PDIA5Q14554 519 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 ZC3H15Q8WU90 426 aaKnown RBP16.01■□□□□ 0.15
TTC3-219ENST00000485402 PSMC6P62333 389 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 KCNA1Q09470 495 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 COG2Q14746 738 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 PPP2R5AQ15172 486 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 COBLL1Q53SF7 1204 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 UBAP2Q5T6F2 1119 aaKnown RBP16.01■□□□□ 0.15
TTC3-219ENST00000485402 LRRC57Q8N9N7 239 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 STAMBPL1Q96FJ0 436 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 NOD2Q9HC29 1040 aa16.01■□□□□ 0.15
TTC3-219ENST00000485402 CCT8L1PA6NM43 557 aa16■□□□□ 0.15
TTC3-219ENST00000485402 CCDC188H7C350 402 aa16■□□□□ 0.15
TTC3-219ENST00000485402 MYBP10242 640 aa16■□□□□ 0.15
TTC3-219ENST00000485402 FGFR4P22455 802 aa16■□□□□ 0.15
TTC3-219ENST00000485402 SREBF1P36956 1147 aa16■□□□□ 0.15
TTC3-219ENST00000485402 DRP2Q13474 957 aa16■□□□□ 0.15
TTC3-219ENST00000485402 PLCB4Q15147 1175 aa16■□□□□ 0.15
TTC3-219ENST00000485402 SFR1Q86XK3 245 aa16■□□□□ 0.15
TTC3-219ENST00000485402 FBXO25Q8TCJ0 367 aa16■□□□□ 0.15
TTC3-219ENST00000485402 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
TTC3-219ENST00000485402 RIPK3Q9Y572 518 aa16■□□□□ 0.15
TTC3-219ENST00000485402 GCNT3O95395 438 aa16■□□□□ 0.15
TTC3-219ENST00000485402 SLC35G2Q8TBE7 412 aa16■□□□□ 0.15
TTC3-219ENST00000485402 RSPH10B2B2RC85 870 aa16■□□□□ 0.15
TTC3-219ENST00000485402 DDX3XO00571 662 aaKnown RBP eCLIP16■□□□□ 0.158e-8■■■■■ 36.6
TTC3-219ENST00000485402 LRRN2O75325 713 aa16■□□□□ 0.15
TTC3-219ENST00000485402 AKAP3O75969 853 aa16■□□□□ 0.15
TTC3-219ENST00000485402 RSPH10BP0C881 870 aa16■□□□□ 0.15
TTC3-219ENST00000485402 CYP11B2P19099 503 aa16■□□□□ 0.15
TTC3-219ENST00000485402 ORC2Q13416 577 aaPredicted RBP16■□□□□ 0.15
TTC3-219ENST00000485402 NOL9Q5SY16 702 aaKnown RBP16■□□□□ 0.15
TTC3-219ENST00000485402 TREML2Q5T2D2 321 aa16■□□□□ 0.15
TTC3-219ENST00000485402 AGBL2Q5U5Z8 902 aa16■□□□□ 0.15
TTC3-219ENST00000485402 EMC10Q5UCC4 262 aa16■□□□□ 0.15
TTC3-219ENST00000485402 SNRNP48Q6IEG0 339 aaKnown RBP16■□□□□ 0.15
TTC3-219ENST00000485402 ANKRD13AQ8IZ07 590 aa16■□□□□ 0.15
TTC3-219ENST00000485402 CCT6BQ92526 530 aa16■□□□□ 0.15
TTC3-219ENST00000485402 RRAGCQ9HB90 399 aa16■□□□□ 0.15
TTC3-219ENST00000485402 FAM114A2Q9NRY5 505 aa16■□□□□ 0.15
TTC3-219ENST00000485402 DNAJC17Q9NVM6 304 aaKnown RBP16■□□□□ 0.15
TTC3-219ENST00000485402 PIK3CDO00329 1044 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 KIF2BQ8N4N8 673 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 ANKRD42Q8N9B4 389 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 ERVK-5Q9HDB9 667 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 PMS2P54278 862 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 ELF3P78545 371 aaPredicted RBP15.99■□□□□ 0.15
TTC3-219ENST00000485402 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 NT5DC3Q86UY8 548 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 HOOK3Q86VS8 718 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 CCDC50Q8IVM0 306 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 CTNNBL1Q8WYA6 563 aaPredicted RBP15.99■□□□□ 0.15
TTC3-219ENST00000485402 MIEF2Q96C03 454 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 SEMA4AQ9H3S1 761 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 A1CFQ9NQ94 594 aaKnown RBP15.99■□□□□ 0.15
TTC3-219ENST00000485402 PKD2L1Q9P0L9 805 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 DOCK1Q14185 1865 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 GOLGA6L10A0A0M3HER8 536 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 FOXO6A8MYZ6 492 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 STAT1P42224 750 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 MAP2K1Q02750 393 aaPredicted RBP15.99■□□□□ 0.15
TTC3-219ENST00000485402 NEK9Q8TD19 979 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 EPS8L3Q8TE67 593 aaKnown RBP15.99■□□□□ 0.15
TTC3-219ENST00000485402 NAP1L4Q99733 375 aaKnown RBP15.99■□□□□ 0.15
TTC3-219ENST00000485402 KCTD10Q9H3F6 313 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 KCNK9Q9NPC2 374 aa15.99■□□□□ 0.15
TTC3-219ENST00000485402 MED24O75448 989 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 ZKSCAN8Q15776 578 aaPredicted RBP15.98■□□□□ 0.15
TTC3-219ENST00000485402 TRMT1LQ7Z2T5 733 aaKnown RBP15.98■□□□□ 0.15
TTC3-219ENST00000485402 CLEC4DQ8WXI8 215 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 CALR3Q96L12 384 aaKnown RBP15.98■□□□□ 0.15
TTC3-219ENST00000485402 RAB17Q9H0T7 212 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 COL20A1Q9P218 1284 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 ATP6V1G2O95670 118 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 DSG3P32926 999 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 MKRN3Q13064 507 aaKnown RBP15.98■□□□□ 0.15
TTC3-219ENST00000485402 CATSPERGQ6ZRH7 1159 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 C18orf8Q96DM3 657 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 NT5C3AQ9H0P0 336 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 RNF146Q9NTX7 359 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 A0A1B0GUA9 196 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 SLC8A1P32418 973 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 RPS6P62753 249 aaKnown RBP15.98■□□□□ 0.15
TTC3-219ENST00000485402 ERMARDQ5T6L9 678 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 SYCE1Q8N0S2 351 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 NSMCE1Q8WV22 266 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 SLITRK6Q9H5Y7 841 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 ABCF3Q9NUQ8 709 aa15.98■□□□□ 0.15
TTC3-219ENST00000485402 BZW2Q9Y6E2 419 aaKnown RBP15.98■□□□□ 0.15
TTC3-219ENST00000485402 EVI5O60447 810 aa15.97■□□□□ 0.15
TTC3-219ENST00000485402 EIF2AK2P19525 551 aaKnown RBP15.97■□□□□ 0.15
TTC3-219ENST00000485402 PSEN1P49768 467 aa15.97■□□□□ 0.15
TTC3-219ENST00000485402 ARMC9Q7Z3E5 817 aa15.97■□□□□ 0.15
TTC3-219ENST00000485402 MCF2L2Q86YR7 1114 aa15.97■□□□□ 0.15
TTC3-219ENST00000485402 CRYGNQ8WXF5 182 aa15.97■□□□□ 0.15
TTC3-219ENST00000485402 FAM129AQ9BZQ8 928 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms