RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 CLDN3O15551 220 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 VIMP08670 466 aaKnown RBP15.48■□□□□ 0.07
ERCC3-202ENST00000426778 ITGB5P18084 799 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 PTGIRP43119 386 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 COL23A1Q86Y22 540 aaPredicted RBP15.48■□□□□ 0.07
ERCC3-202ENST00000426778 CBWD2Q8IUF1 395 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 ADRB2P07550 413 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 CHRNB2P17787 502 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 SCTRP47872 440 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 MMP14P50281 582 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 PPP2R5CQ13362 524 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 FAM133BQ5BKY9 247 aaKnown RBP15.47■□□□□ 0.07
ERCC3-202ENST00000426778 C1orf220Q5T0J3 134 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 PLA2G4FQ68DD2 849 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 PRUNE1Q86TP1 453 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.47■□□□□ 0.07
ERCC3-202ENST00000426778 SEMA4DQ92854 862 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 ZSWIM1Q9BR11 485 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 PI4K2AQ9BTU6 479 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 NUP85Q9BW27 656 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 IDI2Q9BXS1 227 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 COL20A1Q9P218 1284 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 TRPC6Q9Y210 931 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 LOC102724159A0A0B4J2E5 919 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 PEX3P56589 373 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 TNIP1Q15025 636 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 PWP2Q15269 919 aaKnown RBP15.47■□□□□ 0.07
ERCC3-202ENST00000426778 SEPT14Q6ZU15 432 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 PODNQ7Z5L7 613 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 C1orf131Q8NDD1 294 aaKnown RBP15.47■□□□□ 0.07
ERCC3-202ENST00000426778 TLCD1Q96CP7 247 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 CHMP6Q96FZ7 201 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 KREMEN1Q96MU8 473 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 VEZTQ9HBM0 779 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 PHF2O75151 1096 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 RARAP10276 462 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 BCRP11274 1271 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 GPC5P78333 572 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 KIF22Q14807 665 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 LMBRD2Q68DH5 695 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-202ENST00000426778 MIER3Q7Z3K6 550 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 HVCN1Q96D96 273 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 HSPBP1Q9NZL4 362 aa15.47■□□□□ 0.07
ERCC3-202ENST00000426778 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 NFIBO00712 420 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 ZNF131P52739 623 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 SPP2Q13103 211 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 ERMARDQ5T6L9 678 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 SPATS2Q86XZ4 545 aaKnown RBP15.46■□□□□ 0.07
ERCC3-202ENST00000426778 EIF1ADQ8N9N8 165 aaKnown RBP15.46■□□□□ 0.07
ERCC3-202ENST00000426778 EPS8L1Q8TE68 723 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 MKNK1Q9BUB5 465 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 TEKT3Q9BXF9 490 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 TMEM117Q9H0C3 514 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 ZHX2Q9Y6X8 837 aa15.46■□□□□ 0.07
ERCC3-202ENST00000426778 CLSTN1O94985 981 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 GJC1P36383 396 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 CDR1P51861 262 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 SLC15A2Q16348 729 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 UGCGQ16739 394 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 SEL1L2Q5TEA6 688 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 YTHDF3Q7Z739 585 aaKnown RBP15.46■□□□□ 0.06
ERCC3-202ENST00000426778 LDHDQ86WU2 507 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 UBL4BQ8N7F7 174 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 ZNF564Q8TBZ8 553 aaPredicted RBP15.46■□□□□ 0.06
ERCC3-202ENST00000426778 ZKSCAN4Q969J2 545 aaPredicted RBP15.46■□□□□ 0.06
ERCC3-202ENST00000426778 PAGR1Q9BTK6 254 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 KCNH7Q9NS40 1196 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 INTS9Q9NV88 658 aaKnown RBP15.46■□□□□ 0.06
ERCC3-202ENST00000426778 TBK1Q9UHD2 729 aa15.46■□□□□ 0.06
ERCC3-202ENST00000426778 RASSF9O75901 435 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 ALDH1B1P30837 517 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 MXI1P50539 228 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 SP4Q02446 784 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 PPP1R7Q15435 360 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 ANKRD42Q8N9B4 389 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 HERPUD2Q9BSE4 406 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 FAM129AQ9BZQ8 928 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 TTC7AQ9ULT0 858 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-202ENST00000426778 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-202ENST00000426778 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-202ENST00000426778 CCDC169A6NNP5 214 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 O00370 1275 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 CHKAP35790 457 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 PEX5P50542 639 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 SETQ01105 290 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-202ENST00000426778 STRIP1Q5VSL9 837 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 CYB5D1Q6P9G0 228 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 HOOK3Q86VS8 718 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 FUKQ8N0W3 1084 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 ATXN2LQ8WWM7 1075 aaKnown RBP15.45■□□□□ 0.06
ERCC3-202ENST00000426778 TBC1D31Q96DN5 1066 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 HEMGNQ9BXL5 484 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 ADAM33Q9BZ11 813 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 RASAL2Q9UJF2 1139 aa15.45■□□□□ 0.06
ERCC3-202ENST00000426778 AFF2P51816 1311 aa15.44■□□□□ 0.06
ERCC3-202ENST00000426778 PIK3CDO00329 1044 aa15.44■□□□□ 0.06
ERCC3-202ENST00000426778 RAD17O75943 681 aa15.44■□□□□ 0.06
ERCC3-202ENST00000426778 ANXA13P27216 316 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms