RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PRPF4BQ13523 1007 aaKnown RBP16.92■□□□□ 0.3
NUP50-204ENST00000417702 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
NUP50-204ENST00000417702 CLUL1Q15846 466 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 DUSP6Q16828 381 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 KCTD17Q8N5Z5 321 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
NUP50-204ENST00000417702 IGSF21Q96ID5 467 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 GAD1Q99259 594 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 TMEM175Q9BSA9 504 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 CD207Q9UJ71 328 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 GIT1Q9Y2X7 761 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 HES2Q9Y543 173 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 K7ELQ4 463 aaPredicted RBP16.91■□□□□ 0.3
NUP50-204ENST00000417702 ACKR2O00590 384 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 N4BP3O15049 544 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 ALDH2P05091 517 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 SRGAP2BP0DMP2 458 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 CA8P35219 290 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 SLC11A1P49279 550 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 DDX53Q86TM3 631 aaKnown RBP16.91■□□□□ 0.3
NUP50-204ENST00000417702 CDR2LQ86X02 465 aaPredicted RBP16.91■□□□□ 0.3
NUP50-204ENST00000417702 ZNF280BQ86YH2 543 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 VPS52Q8N1B4 723 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 AK8Q96MA6 479 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 ADPGKQ9BRR6 497 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 NXF3Q9H4D5 531 aaKnown RBP16.91■□□□□ 0.3
NUP50-204ENST00000417702 POLD4Q9HCU8 107 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 DNAJB4Q9UDY4 337 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 FAN1Q9Y2M0 1017 aa16.91■□□□□ 0.3
NUP50-204ENST00000417702 ARL5CA6NH57 179 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 CCDC169A6NNP5 214 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 INPPL1O15357 1258 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 SLC26A4O43511 780 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 HIP1RO75146 1068 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 DDHD2O94830 711 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
NUP50-204ENST00000417702 MLH1P40692 756 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 AFF1P51825 1210 aaKnown RBP16.9■□□□□ 0.3
NUP50-204ENST00000417702 DMP1Q13316 513 aaPredicted RBP16.9■□□□□ 0.3
NUP50-204ENST00000417702 SMAD4Q13485 552 aaKnown RBP16.9■□□□□ 0.3
NUP50-204ENST00000417702 HYIQ5T013 277 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 RINT1Q6NUQ1 792 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 KCNK18Q7Z418 384 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 TMEM173Q86WV6 379 aaPredicted RBP16.9■□□□□ 0.3
NUP50-204ENST00000417702 FAM178BQ8IXR5 827 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 MRPL43Q8N983 215 aaKnown RBP16.9■□□□□ 0.3
NUP50-204ENST00000417702 DRC1Q96MC2 740 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 PLIN2Q99541 437 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 KIFC3Q9BVG8 833 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 RUSC1Q9BVN2 902 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 TIPINQ9BVW5 301 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
NUP50-204ENST00000417702 STK39Q9UEW8 545 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 PARP2Q9UGN5 583 aa16.9■□□□□ 0.3
NUP50-204ENST00000417702 HIDE1A8MVS5 230 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 K7ERI5 159 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 NR1I2O75469 434 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 CXCL14O95715 111 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 SYT1P21579 422 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 AKAP5P24588 427 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 SSTR3P32745 418 aaPredicted RBP16.89■□□□□ 0.29
NUP50-204ENST00000417702 UBA7P41226 1012 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 PEX3P56589 373 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
NUP50-204ENST00000417702 C1orf186Q6ZWK4 172 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 APBB1IPQ7Z5R6 666 aaPredicted RBP16.89■□□□□ 0.29
NUP50-204ENST00000417702 CABP7Q86V35 215 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 ZFP42Q96MM3 310 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 PNMA5Q96PV4 448 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 CCDC113Q9H0I3 377 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 PDZD7Q9H5P4 517 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 C17orf75Q9HAS0 396 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 CLEC1BQ9P126 229 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 PRKAG3Q9UGI9 489 aa16.89■□□□□ 0.29
NUP50-204ENST00000417702 BARX2Q9UMQ3 279 aaPredicted RBP16.89■□□□□ 0.29
NUP50-204ENST00000417702 C2orf71A6NGG8 1288 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 MBTPS2O43462 519 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 B4GALT3O60512 393 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 GLP2RO95838 553 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 NPTX2P47972 431 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 SCNN1GP51170 649 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 COASYQ13057 564 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 GIT2Q14161 759 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 COLGALT2Q8IYK4 626 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 GJD3Q8N144 294 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 SYT2Q8N9I0 419 aaPredicted RBP16.88■□□□□ 0.29
NUP50-204ENST00000417702 RASSF8Q8NHQ8 419 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 MSLNLQ96KJ4 702 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 ZBP1Q9H171 429 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 KMT5AQ9NQR1 393 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 PHLPP2Q6ZVD8 1323 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 ZMYM2Q9UBW7 1377 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 XIRP2A4UGR9 3374 aa16.88■□□□□ 0.29
NUP50-204ENST00000417702 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms