RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TTC1Q99614 292 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 TCF25Q9BQ70 676 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 SPC25Q9HBM1 224 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 APOBEC2Q9Y235 224 aaKnown RBP5.98□□□□□ -1.45
CLK1-203ENST00000409769 RBM8AQ9Y5S9 174 aaKnown RBP5.98□□□□□ -1.45
CLK1-203ENST00000409769 CDC42BPBQ9Y5S2 1711 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 PREX2Q70Z35 1606 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 ABCA9Q8IUA7 1624 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.98□□□□□ -1.45
CLK1-203ENST00000409769 MYOM3Q5VTT5 1437 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 MYO5CQ9NQX4 1742 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 GOLGA8BA8MQT2 603 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 DNAJC6O75061 913 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 JUNP05412 331 aaKnown RBP5.97□□□□□ -1.45
CLK1-203ENST00000409769 VSIG10L2P0DP72 767 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 CPEP16870 476 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 POU3F3P20264 500 aaPredicted RBP5.97□□□□□ -1.45
CLK1-203ENST00000409769 BCAR1P56945 870 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 SLC6A3Q01959 620 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 TCIRG1Q13488 830 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 ELAVL1Q15717 326 aaKnown RBP5.97□□□□□ -1.45
CLK1-203ENST00000409769 GAREM2Q75VX8 874 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 STRA8Q7Z7C7 330 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 ANKRD53Q8N9V6 530 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 PITHD1Q9GZP4 211 aaPredicted RBP5.97□□□□□ -1.45
CLK1-203ENST00000409769 HAPLN2Q9GZV7 340 aa5.97□□□□□ -1.45
CLK1-203ENST00000409769 POLR3BQ9NW08 1133 aaPredicted RBP5.97□□□□□ -1.45
CLK1-203ENST00000409769 GPATCH8Q9UKJ3 1502 aaKnown RBP5.97□□□□□ -1.45
CLK1-203ENST00000409769 TCOF1Q13428 1488 aaKnown RBP5.96□□□□□ -1.45
CLK1-203ENST00000409769 ARAP3Q8WWN8 1544 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 C2orf78A6NCI8 922 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 GOLGA6L6A8MZA4 724 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 NEMP1O14524 444 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 DAPK3O43293 454 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 MFAP3LO75121 409 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 ULK1O75385 1050 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 IPO13O94829 963 aaKnown RBP5.96□□□□□ -1.46
CLK1-203ENST00000409769 ADAM8P78325 824 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 MYBPC3Q14896 1274 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 RNF187Q5TA31 235 aaPredicted RBP5.96□□□□□ -1.46
CLK1-203ENST00000409769 TIGD7Q6NT04 549 aaPredicted RBP5.96□□□□□ -1.46
CLK1-203ENST00000409769 DNAJC10Q8IXB1 793 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 C7orf31Q8N865 590 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 PLA2G15Q8NCC3 412 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 SLC5A5Q92911 643 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 ZG16BQ96DA0 208 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 RPL10LQ96L21 214 aaKnown RBP5.96□□□□□ -1.46
CLK1-203ENST00000409769 WDR92Q96MX6 357 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 GPHA2Q96T91 129 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 WNT8AQ9H1J5 351 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 IL23AQ9NPF7 189 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 SLC2A4RGQ9NR83 387 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 RCAN3Q9UKA8 241 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 SYNPO2Q9UMS6 1093 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 DMRT1Q9Y5R6 373 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 FGD6Q6ZV73 1430 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 MIA2Q96PC5 1412 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 GLI2P10070 1586 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 PTPN23Q9H3S7 1636 aa5.96□□□□□ -1.46
CLK1-203ENST00000409769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.95□□□□□ -1.46
CLK1-203ENST00000409769 KIF13AQ9H1H9 1805 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.95□□□□□ -1.46
CLK1-203ENST00000409769 PRPF6O94906 941 aaKnown RBP5.95□□□□□ -1.46
CLK1-203ENST00000409769 RGS3P49796 1198 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 SCNN1GP51170 649 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 SESN3P58005 492 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 NANOS3P60323 173 aaKnown RBP5.95□□□□□ -1.46
CLK1-203ENST00000409769 ATP13A4Q4VNC1 1196 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 FKBP15Q5T1M5 1219 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 KRT40Q6A162 431 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 KIAA1841Q6NSI8 718 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 FRMD7Q6ZUT3 714 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 HTR3DQ70Z44 454 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 CLEC14AQ86T13 490 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 RASSF3Q86WH2 238 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 DYDC2Q96IM9 177 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 TUBGCP5Q96RT8 1024 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 C14orf93Q9H972 538 aaKnown RBP5.95□□□□□ -1.46
CLK1-203ENST00000409769 DIP2BQ9P265 1576 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 MAP3K4Q9Y6R4 1608 aa5.95□□□□□ -1.46
CLK1-203ENST00000409769 CCNB3Q8WWL7 1395 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 A0A0A6YYJ9 748 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 UBE2QL1A1L167 161 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 MTSS1O43312 755 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 ADCY2Q08462 1091 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 FAPQ12884 760 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 STRN3Q13033 797 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 TOB2Q14106 344 aaPredicted RBP5.94□□□□□ -1.46
CLK1-203ENST00000409769 DDB1Q16531 1140 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 MAN2A1Q16706 1144 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 CT47A1Q5JQC4 288 aaPredicted RBP5.94□□□□□ -1.46
CLK1-203ENST00000409769 PCSK4Q6UW60 755 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 Q6ZRM9 215 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 ZNF627Q7L945 461 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 UBR7Q8N806 425 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 RTF1Q92541 710 aaKnown RBP5.94□□□□□ -1.46
CLK1-203ENST00000409769 HAS1Q92839 578 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 ZNF496Q96IT1 587 aaPredicted RBP5.94□□□□□ -1.46
CLK1-203ENST00000409769 GPR87Q9BY21 358 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms