RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 FAM83AQ86UY5 434 aa12.16□□□□□ -0.46
SPOP-202ENST00000393328 TRIM59Q8IWR1 403 aa12.16□□□□□ -0.46
SPOP-202ENST00000393328 NLGN2Q8NFZ4 835 aa12.16□□□□□ -0.46
SPOP-202ENST00000393328 U2AF1L4Q8WU68 220 aaKnown RBP12.16□□□□□ -0.46
SPOP-202ENST00000393328 WRNIP1Q96S55 665 aa12.16□□□□□ -0.46
SPOP-202ENST00000393328 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
SPOP-202ENST00000393328 AJAP1Q9UKB5 411 aaPredicted RBP12.16□□□□□ -0.46
SPOP-202ENST00000393328 ATXN2Q99700 1313 aaKnown RBP12.16□□□□□ -0.46
SPOP-202ENST00000393328 ZNF646O15015 1829 aaPredicted RBP12.16□□□□□ -0.46
SPOP-202ENST00000393328 PGRMC1O00264 195 aaKnown RBP12.15□□□□□ -0.46
SPOP-202ENST00000393328 ATP9AO75110 1047 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 TRIM49P0CI25 452 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 TRIM49CP0CI26 452 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 SOX10P56693 466 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 SATB1Q01826 763 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 COBLL1Q53SF7 1204 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 TLDC1Q6P9B6 456 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 SEPT14Q6ZU15 432 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 MIER3Q7Z3K6 550 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 GDAP1Q8TB36 358 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 GPRC5CQ9NQ84 441 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 PTPN22Q9Y2R2 807 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 CYP3A4P08684 503 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 PTGER2P43116 358 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 TNIP1Q15025 636 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 PLCB4Q15147 1175 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 ALKBH5Q6P6C2 394 aaKnown RBP12.15□□□□□ -0.46
SPOP-202ENST00000393328 FAM160B2Q86V87 743 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 LMBR1Q8WVP7 490 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 DYDC1Q8WWB3 177 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 SPIRE2Q8WWL2 714 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 CLEC4DQ8WXI8 215 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 TEKT3Q9BXF9 490 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 ERVK-5Q9HDB9 667 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 ZHX2Q9Y6X8 837 aa12.15□□□□□ -0.46
SPOP-202ENST00000393328 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 MGRN1O60291 552 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 LRRN2O75325 713 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 LGR5O75473 907 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 NPEPPSP55786 919 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.47
SPOP-202ENST00000393328 XRCC4Q13426 336 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 SLC29A2Q14542 456 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 PLA2G4FQ68DD2 849 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 ERICH1Q86X53 443 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 ZSWIM2Q8NEG5 633 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 TRPM4Q8TD43 1214 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 PARD3BQ8TEW8 1205 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 SLC5A5Q92911 643 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 MXRA8Q9BRK3 442 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 INTS9Q9NV88 658 aaKnown RBP12.15□□□□□ -0.47
SPOP-202ENST00000393328 CEP72Q9P209 647 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 PCDHGC5Q9Y5F6 944 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 ASTN1O14525 1302 aa12.15□□□□□ -0.47
SPOP-202ENST00000393328 IGF2BP3O00425 579 aaKnown RBP eCLIP12.14□□□□□ -0.47
SPOP-202ENST00000393328 ICAM1P05362 532 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 ALDH5A1P51649 535 aaPredicted RBP12.14□□□□□ -0.47
SPOP-202ENST00000393328 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 SYCP3Q8IZU3 236 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 ZNF570Q96NI8 536 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 FMO2Q99518 471 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 ATP6V0A4Q9HBG4 840 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
SPOP-202ENST00000393328 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 SSU72P8A0A1W2PR75 194 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 TGFB1I1O43294 461 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 HIP1RO75146 1068 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 GFPT2O94808 682 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 XRCC5P13010 732 aaKnown RBP12.14□□□□□ -0.47
SPOP-202ENST00000393328 SLC8A1P32418 973 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 CRYMQ14894 314 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
SPOP-202ENST00000393328 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 ZBED3Q96IU2 234 aaPredicted RBP12.14□□□□□ -0.47
SPOP-202ENST00000393328 FAM84AQ96KN4 292 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
SPOP-202ENST00000393328 KIFC3Q9BVG8 833 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 SEMA4AQ9H3S1 761 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 PARVGQ9HBI0 331 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 LUC7LQ9NQ29 371 aaKnown RBP12.14□□□□□ -0.47
SPOP-202ENST00000393328 FGFR1OP2Q9NVK5 253 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 SAMD15Q9P1V8 674 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
SPOP-202ENST00000393328 TBC1D12O60347 775 aa12.13□□□□□ -0.47
SPOP-202ENST00000393328 RTN2O75298 545 aa12.13□□□□□ -0.47
SPOP-202ENST00000393328 SNX1Q13596 522 aa12.13□□□□□ -0.47
SPOP-202ENST00000393328 BAATQ14032 418 aaPredicted RBP12.13□□□□□ -0.47
SPOP-202ENST00000393328 UGCGQ16739 394 aa12.13□□□□□ -0.47
SPOP-202ENST00000393328 THEMIS2Q5TEJ8 643 aa12.13□□□□□ -0.47
SPOP-202ENST00000393328 BZW1Q7L1Q6 419 aaKnown RBP12.13□□□□□ -0.47
SPOP-202ENST00000393328 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
SPOP-202ENST00000393328 FBXO25Q8TCJ0 367 aa12.13□□□□□ -0.47
SPOP-202ENST00000393328 RUBCNQ92622 972 aa12.13□□□□□ -0.47
SPOP-202ENST00000393328 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms