RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 GPC5P78333 572 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 TTC27Q6P3X3 843 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 FBXO25Q8TCJ0 367 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 SEMA4DQ92854 862 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 CD101Q93033 1021 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 ZSWIM1Q9BR11 485 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 GRHL1Q9NZI5 618 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 USP20Q9Y2K6 914 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 PCDHA3Q9Y5H8 950 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 FER1L6Q2WGJ9 1857 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 TCRBV7S2A1N4TA0A589 114 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 BACH1O14867 736 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 SLC16A4O15374 487 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 TRAPPC3O43617 180 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 LYPLA2O95372 231 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 SHBGP04278 402 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 COMTP21964 271 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 YWHABP31946 246 aaKnown RBP11.79□□□□□ -0.52
BEST1-201ENST00000378043 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
BEST1-201ENST00000378043 MAGOHP61326 146 aaKnown RBP11.79□□□□□ -0.52
BEST1-201ENST00000378043 PPP2R2AP63151 447 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 ALCAMQ13740 583 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 PPP2R5EQ16537 467 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 UBAP2Q5T6F2 1119 aaKnown RBP11.79□□□□□ -0.52
BEST1-201ENST00000378043 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 TRMT1LQ7Z2T5 733 aaKnown RBP11.79□□□□□ -0.52
BEST1-201ENST00000378043 SLC47A2Q86VL8 602 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 CBWD2Q8IUF1 395 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 MAGOHBQ96A72 148 aaKnown RBP11.79□□□□□ -0.52
BEST1-201ENST00000378043 ST6GALNAC4Q9H4F1 302 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 SNX24Q9Y343 169 aa11.79□□□□□ -0.52
BEST1-201ENST00000378043 PFASO15067 1338 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 GOLGA6L10A0A0M3HER8 536 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 FAM187AA6NFU0 413 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 TMEM110-MUSTN1A8MSY1 372 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 MIF4GDA9UHW6 222 aaKnown RBP11.78□□□□□ -0.52
BEST1-201ENST00000378043 PMM2O15305 246 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 CYP26A1O43174 497 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 ATP9AO75110 1047 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 RTN2O75298 545 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 USP8P40818 1118 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 MXI1P50539 228 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 DRG2P55039 364 aaKnown RBP11.78□□□□□ -0.52
BEST1-201ENST00000378043 PEX3P56589 373 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 GHRHRQ02643 423 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 CETN1Q12798 172 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 DGKZQ13574 1117 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 DHX34Q14147 1143 aaKnown RBP11.78□□□□□ -0.52
BEST1-201ENST00000378043 KRT71Q3SY84 523 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 PCNX4Q63HM2 1172 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 C6orf89Q6UWU4 347 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 TLCD1Q96CP7 247 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
BEST1-201ENST00000378043 SYNGAP1Q96PV0 1343 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 GMNCA6NCL1 334 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 ANKRD63C9JTQ0 380 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 MAPK13O15264 365 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 PHF2O75151 1096 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 MTA2O94776 668 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 PYGMP11217 842 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 CTNNA2P26232 953 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 FNTAP49354 379 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 PLTPP55058 493 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 FMO1Q01740 532 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
BEST1-201ENST00000378043 MTMR1Q13613 665 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 MESDQ14696 234 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 QPCTQ16769 361 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 SPDYCQ5MJ68 293 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 CPXCR1Q8N123 301 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 SYTL5Q8TDW5 730 aaPredicted RBP11.78□□□□□ -0.52
BEST1-201ENST00000378043 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
BEST1-201ENST00000378043 CYFIP2Q96F07 1278 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 BTBD6Q96KE9 485 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 RPS6KC1Q96S38 1066 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 PCYOX1Q9UHG3 505 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
BEST1-201ENST00000378043 CAND2O75155 1236 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 CCNE2O96020 404 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 MMEP08473 750 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 PAEPP09466 180 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 GZMAP12544 262 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 RPL21P46778 160 aaKnown RBP11.77□□□□□ -0.52
BEST1-201ENST00000378043 NCKAP1LP55160 1127 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 MAP3K10Q02779 954 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 ODF2Q5BJF6 829 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 FKBP1CQ5VVH2 108 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 YTHDF3Q7Z739 585 aaKnown RBP11.77□□□□□ -0.52
BEST1-201ENST00000378043 SPATS2Q86XZ4 545 aaKnown RBP11.77□□□□□ -0.52
BEST1-201ENST00000378043 PPM1KQ8N3J5 372 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 OGFOD1Q8N543 542 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 SHC3Q92529 594 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 ELMO3Q96BJ8 720 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 TAAR1Q96RJ0 339 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 POP1Q99575 1024 aaKnown RBP11.77□□□□□ -0.52
BEST1-201ENST00000378043 KIFC3Q9BVG8 833 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 ZNF341Q9BYN7 854 aa11.77□□□□□ -0.52
BEST1-201ENST00000378043 PABPC3Q9H361 631 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms