RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 HIST1H2AHQ96KK5 128 aa7.17□□□□□ -1.26
RNU4-39P-201ENST00000362455 HIST1H2AJQ99878 128 aa7.17□□□□□ -1.26
RNU4-39P-201ENST00000362455 C11orf84Q9BUA3 381 aaPredicted RBP7.17□□□□□ -1.26
RNU4-39P-201ENST00000362455 SGPP1Q9BX95 441 aa7.17□□□□□ -1.26
RNU4-39P-201ENST00000362455 GTPBP4Q9BZE4 634 aaKnown RBP7.17□□□□□ -1.26
RNU4-39P-201ENST00000362455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.17□□□□□ -1.26
RNU4-39P-201ENST00000362455 RCAN3Q9UKA8 241 aa7.17□□□□□ -1.26
RNU4-39P-201ENST00000362455 MYOM3Q5VTT5 1437 aa7.17□□□□□ -1.26
RNU4-39P-201ENST00000362455 MAST1Q9Y2H9 1570 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 TET3O43151 1660 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 CUTAO60888 179 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 MYL1P05976 194 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 POU2F2P09086 479 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 SLC16A1P53985 500 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 FOXO4P98177 505 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 GBX1Q14549 363 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 GRM3Q14832 879 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 ADRM1Q16186 407 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 LILRA6Q6PI73 481 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 KSR2Q6VAB6 950 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 CXXC5Q7LFL8 322 aaKnown RBP7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 SLC35G2Q8TBE7 412 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 FATE1Q969F0 183 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 RUNDC1Q96C34 613 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 NOX5Q96PH1 765 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 TAAR9Q96RI9 348 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 HAPLN2Q9GZV7 340 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 DDX20Q9UHI6 824 aaKnown RBP7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 CROTQ9UKG9 612 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 NOS1P29475 1434 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 VPS8Q8N3P4 1428 aa7.16□□□□□ -1.26
RNU4-39P-201ENST00000362455 SRCAPQ6ZRS2 3230 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 PEX14O75381 377 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 ADCY8P40145 1251 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 ANTXR2P58335 489 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 MAP3K12Q12852 859 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 MALLQ13021 153 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 DGKDQ16760 1214 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 WDR72Q3MJ13 1102 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 CCDC178Q5BJE1 867 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 ATAT1Q5SQI0 421 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 GRAMD4Q6IC98 578 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 KYQ8NBH2 561 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 HPS3Q969F9 1004 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 WRNIP1Q96S55 665 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 FDXACB1Q9BRP7 624 aaPredicted RBP7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 SAP30BPQ9UHR5 308 aaKnown RBP7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 MAGEL2Q9UJ55 1249 aa7.15□□□□□ -1.26
RNU4-39P-201ENST00000362455 DUOX2Q9NRD8 1548 aa7.15□□□□□ -1.27
RNU4-39P-201ENST00000362455 A0A0A6YYK5 440 aaPredicted RBP7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 N4BP3O15049 544 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 SYNMO15061 1565 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 PLIN1O60240 522 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 NRP2O60462 931 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 SEMA7AO75326 666 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 TAL1P17542 331 aaPredicted RBP7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 PDCP20941 246 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 XPAP23025 273 aaPredicted RBP7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 LIMS1P48059 325 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 FXR1P51114 621 aaKnown RBP eCLIP7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 PRDM15P57071 1507 aaPredicted RBP7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 MLANAQ16655 118 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 BTNL9Q6UXG8 535 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 OTOP2Q7RTS6 562 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 UBR1Q8IWV7 1749 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 TTLL6Q8N841 843 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 LINC00482Q8N8I6 264 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 NRG4Q8WWG1 115 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 DYDC2Q96IM9 177 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 ERBINQ96RT1 1412 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 SOX7Q9BT81 388 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 DMRT3Q9NQL9 472 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 FAM53CQ9NYF3 392 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 SYNPO2Q9UMS6 1093 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 DNM3Q9UQ16 869 aa7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
RNU4-39P-201ENST00000362455 ZFYVE9O95405 1425 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 FRMPD2Q68DX3 1309 aaPredicted RBP7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 CTNND1O60716 968 aaKnown RBP7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 SEC24DO94855 1032 aaPredicted RBP7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 KNG1P01042 644 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 NRG3P56975 720 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 SMAD4Q13485 552 aaKnown RBP7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 UBE4AQ14139 1066 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 MUM1L1Q5H9M0 696 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 TMEM200BQ69YZ2 307 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 USP45Q70EL2 814 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 GLB1L2Q8IW92 636 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 GRAMD1CQ8IYS0 662 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 BCL6BQ8N143 479 aaPredicted RBP7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 GLB1L3Q8NCI6 653 aaPredicted RBP7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 DIS3LQ8TF46 1054 aaKnown RBP7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 ZBTB8AQ96BR9 441 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 MAP3K14Q99558 947 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 GCM1Q9NP62 436 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 C1orf112Q9NSG2 853 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 POLR3BQ9NW08 1133 aaPredicted RBP7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 SCOCQ9UIL1 159 aa7.13□□□□□ -1.27
RNU4-39P-201ENST00000362455 LIMCH1Q9UPQ0 1083 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms