RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CYP2J2P51589 502 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 KIF11P52732 1056 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 SMTNP53814 917 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 IGBP1P78318 339 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 GTF2BQ00403 316 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 KIAA0753Q2KHM9 967 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 ASTE1Q2TB18 679 aaPredicted RBP24.64■■□□□ 1.53
CDX1-201ENST00000231656 HAUS6Q7Z4H7 955 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 KIAA1328Q86T90 577 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 SLC17A8Q8NDX2 589 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 JAKMIP2Q96AA8 810 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 IFT74Q96LB3 600 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 ACCSQ96QU6 501 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 JPH2Q9BR39 696 aaPredicted RBP24.64■■□□□ 1.53
CDX1-201ENST00000231656 KMT5AQ9NQR1 393 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 TFR2Q9UP52 801 aa24.64■■□□□ 1.53
CDX1-201ENST00000231656 INHAP05111 366 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 GRK4P32298 578 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 NKX3-2P78367 333 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 MKRN4PQ13434 485 aaPredicted RBP24.63■■□□□ 1.53
CDX1-201ENST00000231656 DRP2Q13474 957 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 EXOC3L4Q17RC7 722 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 SFMBT2Q5VUG0 894 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 TCERG1LQ5VWI1 586 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 C12orf56Q8IXR9 622 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 LRRC71Q8N4P6 559 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 SUGCTQ9HAC7 445 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 SPC25Q9HBM1 224 aa24.63■■□□□ 1.53
CDX1-201ENST00000231656 SSU72P8A0A1W2PR75 194 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 C22orf31O95567 290 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 ACTN1P12814 892 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 GLRA2P23416 452 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 VAV2P52735 878 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 PURAQ00577 322 aaKnown RBP24.62■■□□□ 1.53
CDX1-201ENST00000231656 CYP27A1Q02318 531 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 PPFIA1Q13136 1202 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 GNASQ5JWF2 1037 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 CCDC122Q5T0U0 273 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 GBP6Q6ZN66 633 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 TMEM161BQ8NDZ6 487 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 ASAP3Q8TDY4 903 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 TCP11Q8WWU5 503 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 ZBTB10Q96DT7 871 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 LACRTQ9GZZ8 138 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 XPNPEP3Q9NQH7 507 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 CGNQ9P2M7 1197 aaKnown RBP24.62■■□□□ 1.53
CDX1-201ENST00000231656 GUCA1BQ9UMX6 200 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 FRMD4BQ9Y2L6 1034 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 ADAMTS4O75173 837 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 CHMP4BP1P59074 171 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 MFSD10Q14728 455 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 SPA17Q15506 151 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 KLHDC7AQ5VTJ3 777 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 IER5Q5VY09 327 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 KIFC3Q9BVG8 833 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 CARD6Q9BX69 1037 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 SIX2Q9NPC8 291 aa24.62■■□□□ 1.53
CDX1-201ENST00000231656 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.62■■□□□ 1.53
CDX1-201ENST00000231656 V9GYY5 206 aaPredicted RBP24.62■■□□□ 1.53
CDX1-201ENST00000231656 DNAH12Q6ZR08 3092 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 CTAGE9A4FU28 777 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 HAS3O00219 553 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 KPNA6O60684 536 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 SERPING1P05155 500 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 KLRC1P26715 233 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 PPP2R5AQ15172 486 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 GRIK4Q16099 956 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 EFCAB12Q6NXP0 572 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 GPIHBP1Q8IV16 184 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 PRPF31Q8WWY3 499 aaKnown RBP24.61■■□□□ 1.53
CDX1-201ENST00000231656 AIPL1Q9NZN9 384 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 DDX20Q9UHI6 824 aaKnown RBP24.61■■□□□ 1.53
CDX1-201ENST00000231656 KCNG1Q9UIX4 513 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 ADGRA3Q8IWK6 1321 aa24.61■■□□□ 1.53
CDX1-201ENST00000231656 MAGEB2O15479 319 aa24.6■■□□□ 1.53
CDX1-201ENST00000231656 PSEN2P49810 448 aa24.6■■□□□ 1.53
CDX1-201ENST00000231656 SLC9C1Q4G0N8 1177 aa24.6■■□□□ 1.53
CDX1-201ENST00000231656 MARCH8Q5T0T0 291 aa24.6■■□□□ 1.53
CDX1-201ENST00000231656 METTL13Q8N6R0 699 aa24.6■■□□□ 1.53
CDX1-201ENST00000231656 NAPGQ99747 312 aaPredicted RBP24.6■■□□□ 1.53
CDX1-201ENST00000231656 DEF6Q9H4E7 631 aa24.6■■□□□ 1.53
CDX1-201ENST00000231656 FBXL5Q9UKA1 691 aa24.6■■□□□ 1.53
CDX1-201ENST00000231656 PCDHA13Q9Y5I0 950 aa24.6■■□□□ 1.53
CDX1-201ENST00000231656 TISP43B9A030 160 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 KRT86O43790 486 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 AKR1B10O60218 316 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 EXOC3O60645 756 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 TADA3O75528 432 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 SMIM10L2AP0DMW4 78 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 SMIM10L2BP0DMW5 78 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 UCHL3P15374 230 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 NAMPTP43490 491 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 SNRPFP62306 86 aaKnown RBP24.59■■□□□ 1.53
CDX1-201ENST00000231656 PSPC1Q8WXF1 523 aaKnown RBP24.59■■□□□ 1.53
CDX1-201ENST00000231656 KATNAL1Q9BW62 490 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 GCNT4Q9P109 453 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 DENND3A2RUS2 1198 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 FMO5P49326 533 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 RAPGEF1Q13905 1077 aa24.59■■□□□ 1.53
CDX1-201ENST00000231656 MTHFD1LQ6UB35 978 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms