RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Cxcl9P18340 126 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Slc12a2P55012 1205 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Slc16a10Q3U9N9 512 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Sin3bQ62141 1098 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 EcsitQ9QZH6 435 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Prmt2Q9R144 448 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Fam71aB7XG49 585 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Sclt1G5E861 688 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 PltpP55065 493 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Il6stQ00560 917 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 SugctQ7TNE1 436 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 RubcnQ80U62 956 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 H6pdQ8CFX1 789 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ube2sQ921J4 223 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 PdgfdQ925I7 370 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Uchl3Q9JKB1 230 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Unc13dB2RUP2 1085 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Gjc1P28229 396 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Znf367Q0VDT2 340 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ccdc34Q3UI66 367 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Mcf2lQ64096 1149 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Fez2Q6TYB5 348 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 PdgfcQ8CI19 345 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Dnajc14Q921R4 703 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Eps8l2Q99K30 729 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Gtpbp4Q99ME9 634 aaKnown RBP17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Slc12a9Q99MR3 914 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Rbm31yQ9D3U4 565 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Bub1bQ9Z1S0 1052 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 H2afzP0C0S6 128 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tnni3P48787 211 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 H2afvQ3THW5 128 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Zbtb5Q7TQG0 670 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Kctd6Q8BNL5 237 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Prpf31Q8CCF0 499 aaKnown RBP17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ttc1Q91Z38 292 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Sv2aQ9JIS5 742 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tll2Q9WVM6 1012 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 Arih1Q9Z1K5 555 aa17.13■□□□□ 0.33
Trim39-203ENSMUST00000113706 DgkkE9Q7N4 1118 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 EpoP07321 192 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 SelpQ01102 768 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 OsbpQ3B7Z2 805 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Atp6v0d2Q80SY3 350 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ankfy1Q810B6 1169 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Depdc1bQ8BH88 529 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Spon1Q8VCC9 807 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Sgip1Q8VD37 806 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Robo3Q9Z2I4 1366 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 GclmO09172 274 aaKnown RBP17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Lpar1P61793 364 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Gm5935Q497S0 212 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 R3hdm2Q80TM6 1044 aaKnown RBP17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ago2Q8CJG0 860 aaKnown RBP17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Plcb4Q91UZ1 1175 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tas1r1Q99PG6 842 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 Nup50Q9JIH2 466 aaKnown RBP17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 DonsonQ9QXP4 560 aa17.12■□□□□ 0.33
Trim39-203ENSMUST00000113706 VegfaQ00731 214 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Phactr1Q2M3X8 580 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Nudt16Q6P3D0 195 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Fmnl3Q6ZPF4 1028 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ubap2lQ80X50 1107 aaKnown RBP17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ece2Q80Z60 881 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Spata2Q8K004 515 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Dlk2Q8K1E3 382 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Klhl36Q8R124 613 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Vps36Q91XD6 386 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Pcdha2Q91Y17 948 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Me2Q99KE1 589 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Alkbh1P0CB42 389 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 SpoplQ2M2N2 392 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Cln3Q61124 438 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 HrQ61645 1182 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Mapk15Q80Y86 549 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Osbpl2Q8BX94 484 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Mamdc2Q8CG85 686 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Olfr390Q8VEZ7 311 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Eif4e3Q9DBB5 207 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 DgkhD3YXJ0 1156 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Rnf113a2Q14B01 337 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Miga1Q4QQM5 600 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 F13a1Q8BH61 732 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Fbxo44Q8BK26 255 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Leg1Q8C6C9 337 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Slc26a6Q8CIW6 758 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Elp3Q9CZX0 547 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Nxnl2Q9D531 156 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Lztfl1Q9JHQ5 299 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Scgb2b12S4R2L0 112 aa17.11■□□□□ 0.33
Trim39-203ENSMUST00000113706 Gm7086A0A1W2P766 342 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Mmrn2A6H6E2 943 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Serpinb3aG3X9V8 387 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Smyd5Q3TYX3 416 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tatdn3Q3U1C6 294 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Abi3bpQ59IW6 1179 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Gba2Q69ZF3 918 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Acot5Q6Q2Z6 421 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 6820408C15RikQ8BJX2 354 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Atp2a1Q8R429 994 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms