RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	PLP2	Q12017	286 aa		3.2	□□□□□ -1.9
USV1	YPL230W	MSH5	Q12175	901 aa		3.2	□□□□□ -1.9
USV1	YPL230W	CHD1	P32657	1468 aa		3.2	□□□□□ -1.9
USV1	YPL230W	CDC36	P06100	191 aa	Predicted RBP	3.19	□□□□□ -1.9
USV1	YPL230W	ARG80	P07249	177 aa		3.19	□□□□□ -1.9
USV1	YPL230W	PRB1	P09232	635 aa		3.19	□□□□□ -1.9
USV1	YPL230W	CBS2	P14905	389 aa		3.19	□□□□□ -1.9
USV1	YPL230W	RPL24B	P24000	155 aa	Known RBP	3.19	□□□□□ -1.9
USV1	YPL230W	RPL16B	P26785	198 aa	Known RBP	3.19	□□□□□ -1.9
USV1	YPL230W	MRPL6	P32904	214 aa		3.19	□□□□□ -1.9
USV1	YPL230W	MRX3	P38172	270 aa		3.19	□□□□□ -1.9
USV1	YPL230W	PFS1	P38872	237 aa		3.19	□□□□□ -1.9
USV1	YPL230W	RPL10	P41805	221 aa	Known RBP	3.19	□□□□□ -1.9
USV1	YPL230W	AIM23	P47015	356 aa		3.19	□□□□□ -1.9
USV1	YPL230W	TAD2	P47058	250 aa		3.19	□□□□□ -1.9
USV1	YPL230W	PRP38	Q00723	242 aa	Predicted RBP	3.19	□□□□□ -1.9
USV1	YPL230W	YET2	Q04210	160 aa		3.19	□□□□□ -1.9
USV1	YPL230W	GAS2	Q06135	555 aa		3.19	□□□□□ -1.9
USV1	YPL230W	YLR446W	Q06204	433 aa		3.19	□□□□□ -1.9
USV1	YPL230W	SFM1	Q12314	213 aa		3.19	□□□□□ -1.9
USV1	YPL230W	NCB2	Q92317	146 aa		3.19	□□□□□ -1.9
USV1	YPL230W	REV1	P12689	985 aa		3.18	□□□□□ -1.9
USV1	YPL230W	TFS1	P14306	219 aa		3.18	□□□□□ -1.9
USV1	YPL230W	RPO26	P20435	155 aa		3.18	□□□□□ -1.9
USV1	YPL230W	AAT2	P23542	418 aa	Known RBP	3.18	□□□□□ -1.9
USV1	YPL230W	GIT1	P25346	518 aa		3.18	□□□□□ -1.9
USV1	YPL230W	PBN1	P25580	416 aa		3.18	□□□□□ -1.9
USV1	YPL230W	DEP1	P31385	405 aa		3.18	□□□□□ -1.9
USV1	YPL230W	KTI12	P34253	313 aa	Known RBP	3.18	□□□□□ -1.9
USV1	YPL230W	PRS2	P38620	318 aa	Known RBP	3.18	□□□□□ -1.9
USV1	YPL230W	TIM17	P39515	158 aa		3.18	□□□□□ -1.9
USV1	YPL230W	PEX22	P39718	180 aa		3.18	□□□□□ -1.9
USV1	YPL230W	MIG3	P39943	394 aa		3.18	□□□□□ -1.9
USV1	YPL230W	GDS1	P41913	522 aa		3.18	□□□□□ -1.9
USV1	YPL230W	YPI1	P43587	155 aa		3.18	□□□□□ -1.9
USV1	YPL230W	YPT32	P51996	222 aa	Known RBP	3.18	□□□□□ -1.9
USV1	YPL230W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
USV1	YPL230W	TRM44	Q02648	567 aa	Known RBP	3.18	□□□□□ -1.9
USV1	YPL230W	ENT5	Q03769	411 aa	Known RBP	3.18	□□□□□ -1.9
USV1	YPL230W	MYO5	Q04439	1219 aa	Known RBP	3.18	□□□□□ -1.9
USV1	YPL230W	FAR10	Q06001	478 aa		3.18	□□□□□ -1.9
USV1	YPL230W	CSM4	Q08955	156 aa		3.18	□□□□□ -1.9
USV1	YPL230W	RRP42	Q12277	265 aa	Predicted RBP	3.18	□□□□□ -1.9
USV1	YPL230W	CFT1	Q06632	1357 aa	Known RBP	3.17	□□□□□ -1.9
USV1	YPL230W	MER1	P16523	270 aa		3.17	□□□□□ -1.9
USV1	YPL230W	IFM1	P25038	676 aa		3.17	□□□□□ -1.9
USV1	YPL230W	LDS1	P31379	325 aa		3.17	□□□□□ -1.9
USV1	YPL230W	LDB7	P38210	180 aa		3.17	□□□□□ -1.9
USV1	YPL230W	SLX1	P38324	304 aa		3.17	□□□□□ -1.9
USV1	YPL230W	CHL4	P38907	458 aa		3.17	□□□□□ -1.9
USV1	YPL230W	ASG7	P46993	209 aa		3.17	□□□□□ -1.9
USV1	YPL230W	CDH1	P53197	566 aa		3.17	□□□□□ -1.9
USV1	YPL230W	SCS7	Q03529	384 aa		3.17	□□□□□ -1.9
USV1	YPL230W	LIP2	Q06005	328 aa		3.17	□□□□□ -1.9
USV1	YPL230W	SPO77	Q06134	477 aa		3.17	□□□□□ -1.9
USV1	YPL230W	RRG7	Q08774	242 aa	Predicted RBP	3.17	□□□□□ -1.9
USV1	YPL230W	YOR376W	Q08900	122 aa		3.17	□□□□□ -1.9
USV1	YPL230W	HRT3	Q12347	344 aa		3.17	□□□□□ -1.9
USV1	YPL230W	YPR064W	Q12492	139 aa		3.17	□□□□□ -1.9
USV1	YPL230W	MATALPHA1	P0CY06	175 aa		3.16	□□□□□ -1.9
USV1	YPL230W	HMLALPHA1	P0CY07	175 aa		3.16	□□□□□ -1.9
USV1	YPL230W	NHP6B	P11633	99 aa	Known RBP	3.16	□□□□□ -1.9
USV1	YPL230W	ERD1	P16151	362 aa		3.16	□□□□□ -1.9
USV1	YPL230W	COQ1	P18900	473 aa		3.16	□□□□□ -1.9
USV1	YPL230W	PPA2	P28239	310 aa		3.16	□□□□□ -1.9
USV1	YPL230W	YKL187C	P34231	750 aa		3.16	□□□□□ -1.9
USV1	YPL230W	YPC1	P38298	316 aa		3.16	□□□□□ -1.9
USV1	YPL230W	WSC4	P38739	605 aa		3.16	□□□□□ -1.9
USV1	YPL230W	UTP18	P40362	594 aa	Predicted RBP	3.16	□□□□□ -1.9
USV1	YPL230W	HIT1	P46973	164 aa		3.16	□□□□□ -1.9
USV1	YPL230W	RPC17	P47076	161 aa		3.16	□□□□□ -1.9
USV1	YPL230W	VHT1	P53241	593 aa		3.16	□□□□□ -1.9
USV1	YPL230W	TPC1	P53257	314 aa		3.16	□□□□□ -1.9
USV1	YPL230W	SLT2	Q00772	484 aa		3.16	□□□□□ -1.9
USV1	YPL230W	OST6	Q03723	332 aa		3.16	□□□□□ -1.9
USV1	YPL230W	BNA7	Q04066	261 aa		3.16	□□□□□ -1.9
USV1	YPL230W	SSQ1	Q05931	657 aa	Predicted RBP	3.16	□□□□□ -1.9
USV1	YPL230W	YLR177W	Q06251	628 aa		3.16	□□□□□ -1.9
USV1	YPL230W	YPR172W	Q06608	200 aa		3.16	□□□□□ -1.9
USV1	YPL230W	RPN8	Q08723	338 aa	Known RBP	3.16	□□□□□ -1.9
USV1	YPL230W	POM33	Q12164	279 aa		3.16	□□□□□ -1.9
USV1	YPL230W	SME1	Q12330	94 aa	Predicted RBP	3.16	□□□□□ -1.9
USV1	YPL230W	GIS3	Q12418	502 aa		3.16	□□□□□ -1.9
USV1	YPL230W	ZRC1	P20107	442 aa		3.15	□□□□□ -1.91
USV1	YPL230W	CMK2	P22517	447 aa		3.15	□□□□□ -1.91
USV1	YPL230W	RNA15	P25299	296 aa	Predicted RBP	3.15	□□□□□ -1.91
USV1	YPL230W	CDC50	P25656	391 aa		3.15	□□□□□ -1.91
USV1	YPL230W	URA10	P30402	227 aa		3.15	□□□□□ -1.91
USV1	YPL230W	RCK1	P38622	512 aa		3.15	□□□□□ -1.91
USV1	YPL230W	YIA6	P40556	373 aa		3.15	□□□□□ -1.91
USV1	YPL230W	GAB1	P41733	394 aa		3.15	□□□□□ -1.91
USV1	YPL230W	YJR054W	P47114	497 aa		3.15	□□□□□ -1.91
USV1	YPL230W	HOC1	P47124	396 aa		3.15	□□□□□ -1.91
USV1	YPL230W	RAD17	P48581	401 aa		3.15	□□□□□ -1.91
USV1	YPL230W	YGR015C	P53208	328 aa		3.15	□□□□□ -1.91
USV1	YPL230W	CDC14	Q00684	551 aa		3.15	□□□□□ -1.91
USV1	YPL230W	SNZ1	Q03148	297 aa		3.15	□□□□□ -1.91
USV1	YPL230W	TAF9	Q05027	157 aa		3.15	□□□□□ -1.91
USV1	YPL230W	SFH1	Q06168	426 aa		3.15	□□□□□ -1.91
USV1	YPL230W	FUS3	P16892	353 aa	Known RBP	3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms