RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	EFM1	P38732	585 aa		4.16	□□□□□ -1.74
GDE1	YPL110C	YJL107C	P42947	387 aa		4.16	□□□□□ -1.74
GDE1	YPL110C	YGR283C	P53336	341 aa	Predicted RBP	4.16	□□□□□ -1.74
GDE1	YPL110C	YNL184C	P53876	108 aa		4.16	□□□□□ -1.74
GDE1	YPL110C	ATG21	Q02887	496 aa		4.16	□□□□□ -1.74
GDE1	YPL110C	YMR099C	Q03161	297 aa	Known RBP	4.16	□□□□□ -1.74
GDE1	YPL110C	YML018C	Q03730	393 aa		4.16	□□□□□ -1.74
GDE1	YPL110C	SNO4	Q04902	237 aa		4.16	□□□□□ -1.74
GDE1	YPL110C	HSP33	Q08914	237 aa	Known RBP	4.16	□□□□□ -1.74
GDE1	YPL110C	HSP32	Q08992	237 aa		4.16	□□□□□ -1.74
GDE1	YPL110C	AI1	P03875	834 aa		4.15	□□□□□ -1.74
GDE1	YPL110C	FUN14	P18411	198 aa		4.15	□□□□□ -1.74
GDE1	YPL110C	SCL1	P21243	252 aa	Known RBP	4.15	□□□□□ -1.74
GDE1	YPL110C	RBK1	P25332	333 aa		4.15	□□□□□ -1.74
GDE1	YPL110C	PET18	P25362	215 aa		4.15	□□□□□ -1.74
GDE1	YPL110C	ARO2	P28777	376 aa	Known RBP	4.15	□□□□□ -1.74
GDE1	YPL110C	PRS3	P38689	320 aa	Known RBP	4.15	□□□□□ -1.74
GDE1	YPL110C	PSD1	P39006	500 aa		4.15	□□□□□ -1.74
GDE1	YPL110C	RPS12	P48589	143 aa	Known RBP	4.15	□□□□□ -1.74
GDE1	YPL110C	MKC7	P53379	596 aa		4.15	□□□□□ -1.74
GDE1	YPL110C	SLM2	P53955	656 aa		4.15	□□□□□ -1.74
GDE1	YPL110C	GPD1	Q00055	391 aa	Known RBP	4.15	□□□□□ -1.74
GDE1	YPL110C	CUE4	Q04201	117 aa	Predicted RBP	4.15	□□□□□ -1.74
GDE1	YPL110C	YLR179C	Q06252	201 aa	Known RBP	4.15	□□□□□ -1.74
GDE1	YPL110C	GPM3	Q12326	303 aa		4.15	□□□□□ -1.74
GDE1	YPL110C	RIF1	P29539	1916 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	YBR121C-A	P0C5L4	52 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
GDE1	YPL110C	NAR1	P23503	491 aa	Known RBP	4.15	□□□□□ -1.75
GDE1	YPL110C	CYS3	P31373	394 aa	Known RBP	4.15	□□□□□ -1.75
GDE1	YPL110C	YEF1	P32622	495 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	MDL2	P33311	773 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	YKL070W	P36087	169 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	JHD1	P40034	492 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	MOB1	P40484	314 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	PTR3	P43606	678 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	GWT1	P47026	490 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	VPS73	P53142	486 aa	Known RBP	4.15	□□□□□ -1.75
GDE1	YPL110C	YGR066C	P53242	292 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	YMR187C	Q03236	431 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	RIF2	Q06208	395 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	AFT2	Q08957	416 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	SLF1	Q12034	447 aa	Known RBP	4.15	□□□□□ -1.75
GDE1	YPL110C	YPR027C	Q12079	277 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	TPT1	Q12272	230 aa	Known RBP	4.15	□□□□□ -1.75
GDE1	YPL110C	GEP5	Q12393	293 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	PCC1	Q3E833	88 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	YKL033W-A	Q86ZR7	236 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	CDC33	P07260	213 aa	Known RBP	4.15	□□□□□ -1.75
GDE1	YPL110C	CDC26	P14724	124 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	PDA1	P16387	420 aa	Known RBP	4.15	□□□□□ -1.75
GDE1	YPL110C	PHO80	P20052	293 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	SEC22	P22214	214 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	PBN1	P25580	416 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	EHD3	P28817	500 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	PDC2	P32896	925 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	SKN7	P38889	622 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	SNM1	P40993	198 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	ASG7	P46993	209 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	ZAP1	P47043	880 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	ATG4	P53867	494 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	YNL165W	P53891	406 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	YLR446W	Q06204	433 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	BER1	Q06688	274 aa	Known RBP	4.15	□□□□□ -1.75
GDE1	YPL110C	TMS1	Q12116	473 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	YLR108C	Q12259	485 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	UBR1	P19812	1950 aa		4.15	□□□□□ -1.75
GDE1	YPL110C	HTS1	P07263	546 aa	Known RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	CAP1	P28495	268 aa	Known RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	SCD5	P34758	872 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	MRPL24	P36525	258 aa	Predicted RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	MRPL16	P38064	232 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	KTR3	P38130	404 aa	Predicted RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	YEL057C	P39983	233 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	AIM23	P47015	356 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	DAN1	P47178	298 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	MPA43	P53583	542 aa	Predicted RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	NSG2	P53898	299 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	YET2	Q04210	160 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	DPP1	Q05521	289 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	SHS1	Q07657	551 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	ATG10	Q07879	167 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	QCR7	P00128	127 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	PUT1	P09368	476 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	RPL1A	P0CX43	217 aa	Known RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	RPL1B	P0CX44	217 aa	Known RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	YCR023C	P25351	611 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	YCL002C	P25565	263 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	SEC17	P32602	292 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	TMT1	P32643	299 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	ARP1	P38696	384 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	YHR122W	P38829	231 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	FIS1	P40515	155 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	YIL060W	P40519	144 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	TRM44	Q02648	567 aa	Known RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	PKR1	Q03880	122 aa	Known RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	SYT1	Q06836	1226 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	NRT1	Q08485	598 aa		4.14	□□□□□ -1.75
GDE1	YPL110C	ALG6	Q12001	544 aa	Known RBP	4.14	□□□□□ -1.75
GDE1	YPL110C	YPR071W	Q12346	211 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms