RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C ERP3Q12403 225 aa2.91□□□□□ -1.94
LCB4YOR171C MDS3P53094 1487 aa2.91□□□□□ -1.94
LCB4YOR171C IDP1P21954 428 aaKnown RBP2.9□□□□□ -1.94
LCB4YOR171C RNA15P25299 296 aaPredicted RBP2.9□□□□□ -1.94
LCB4YOR171C YCR006CP25350 157 aa2.9□□□□□ -1.94
LCB4YOR171C MXR2P25566 168 aa2.9□□□□□ -1.94
LCB4YOR171C POP5P28005 173 aa2.9□□□□□ -1.94
LCB4YOR171C FUN26P31381 517 aa2.9□□□□□ -1.94
LCB4YOR171C RAD5P32849 1169 aaPredicted RBP2.9□□□□□ -1.94
LCB4YOR171C RRP4P38792 359 aaKnown RBP2.9□□□□□ -1.94
LCB4YOR171C FCY21P40039 528 aa2.9□□□□□ -1.94
LCB4YOR171C RGI1P40043 161 aaPredicted RBP2.9□□□□□ -1.94
LCB4YOR171C XBP1P40489 647 aa2.9□□□□□ -1.94
LCB4YOR171C GUF1P46943 645 aa2.9□□□□□ -1.94
LCB4YOR171C PRP24P49960 444 aaKnown RBP2.9□□□□□ -1.94
LCB4YOR171C AZR1P50080 613 aa2.9□□□□□ -1.94
LCB4YOR171C JAC1P53193 184 aa2.9□□□□□ -1.94
LCB4YOR171C NRK1P53915 240 aa2.9□□□□□ -1.94
LCB4YOR171C SLG1P54867 378 aa2.9□□□□□ -1.94
LCB4YOR171C RSM23Q01163 450 aa2.9□□□□□ -1.94
LCB4YOR171C GIP3Q03016 1276 aa2.9□□□□□ -1.94
LCB4YOR171C PFA5Q03289 374 aa2.9□□□□□ -1.94
LCB4YOR171C PLP1Q04004 230 aa2.9□□□□□ -1.94
LCB4YOR171C SMP3Q04174 516 aa2.9□□□□□ -1.94
LCB4YOR171C SEC13Q04491 297 aaKnown RBP2.9□□□□□ -1.94
LCB4YOR171C PBP4Q07362 185 aaKnown RBP2.9□□□□□ -1.94
LCB4YOR171C LDB18Q07887 179 aa2.9□□□□□ -1.94
LCB4YOR171C YLR031WQ07978 186 aa2.9□□□□□ -1.94
LCB4YOR171C YNG1Q08465 219 aa2.9□□□□□ -1.94
LCB4YOR171C HNT3Q08702 217 aa2.9□□□□□ -1.94
LCB4YOR171C ATP16Q12165 160 aa2.9□□□□□ -1.94
LCB4YOR171C CRC1Q12289 327 aa2.9□□□□□ -1.94
LCB4YOR171C RNH203Q12338 110 aa2.9□□□□□ -1.94
LCB4YOR171C CDC28P00546 298 aaKnown RBP2.9□□□□□ -1.95
LCB4YOR171C MDM10P18409 493 aa2.9□□□□□ -1.95
LCB4YOR171C NUP2P32499 720 aa2.9□□□□□ -1.95
LCB4YOR171C SGE1P33335 543 aa2.9□□□□□ -1.95
LCB4YOR171C MYO3P36006 1272 aa2.9□□□□□ -1.95
LCB4YOR171C PRS3P38689 320 aaKnown RBP2.9□□□□□ -1.95
LCB4YOR171C VPS52P39904 641 aa2.9□□□□□ -1.95
LCB4YOR171C DDI1P40087 428 aa2.9□□□□□ -1.95
LCB4YOR171C PSA1P41940 361 aaKnown RBP2.9□□□□□ -1.95
LCB4YOR171C AIM24P47127 394 aa2.9□□□□□ -1.95
LCB4YOR171C YPL068CQ02749 293 aa2.9□□□□□ -1.95
LCB4YOR171C AIM34Q03673 198 aa2.9□□□□□ -1.95
LCB4YOR171C YML096WQ04489 525 aa2.9□□□□□ -1.95
LCB4YOR171C YLR049CQ12110 428 aa2.9□□□□□ -1.95
LCB4YOR171C FYV7Q12247 151 aa2.9□□□□□ -1.95
LCB4YOR171C RPL28P02406 149 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C COR1P07256 457 aa2.89□□□□□ -1.95
LCB4YOR171C RPL12AP0CX53 165 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C RPL12BP0CX54 165 aa2.89□□□□□ -1.95
LCB4YOR171C YCR102CP25608 368 aa2.89□□□□□ -1.95
LCB4YOR171C CYS4P32582 507 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C SOR1P35497 357 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C RPL32P38061 130 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C BNA4P38169 460 aa2.89□□□□□ -1.95
LCB4YOR171C FMP23P38231 175 aa2.89□□□□□ -1.95
LCB4YOR171C YIL024CP40543 189 aa2.89□□□□□ -1.95
LCB4YOR171C YPS6P40583 537 aa2.89□□□□□ -1.95
LCB4YOR171C MRPL49P40858 161 aaPredicted RBP2.89□□□□□ -1.95
LCB4YOR171C RPL10P41805 221 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C POP1P41812 875 aa2.89□□□□□ -1.95
LCB4YOR171C TAD2P47058 250 aa2.89□□□□□ -1.95
LCB4YOR171C JHD2P47156 728 aaPredicted RBP2.89□□□□□ -1.95
LCB4YOR171C NBP1P52919 319 aaPredicted RBP2.89□□□□□ -1.95
LCB4YOR171C ALG13P53178 202 aa2.89□□□□□ -1.95
LCB4YOR171C MSO1P53604 210 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C MSC1Q03104 513 aa2.89□□□□□ -1.95
LCB4YOR171C YDR209CQ03480 137 aa2.89□□□□□ -1.95
LCB4YOR171C CCE1Q03702 353 aa2.89□□□□□ -1.95
LCB4YOR171C CAC2Q04199 468 aa2.89□□□□□ -1.95
LCB4YOR171C DPP1Q05521 289 aa2.89□□□□□ -1.95
LCB4YOR171C ARC18Q05933 178 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C FRQ1Q06389 190 aa2.89□□□□□ -1.95
LCB4YOR171C MRX9Q07349 420 aaKnown RBP2.89□□□□□ -1.95
LCB4YOR171C SOR2Q07786 357 aa2.89□□□□□ -1.95
LCB4YOR171C TEN1Q07921 160 aa2.89□□□□□ -1.95
LCB4YOR171C YPQ1Q12010 308 aa2.89□□□□□ -1.95
LCB4YOR171C YDR018CQ12185 396 aa2.89□□□□□ -1.95
LCB4YOR171C IES3Q12345 250 aa2.89□□□□□ -1.95
LCB4YOR171C DCN1Q12395 269 aa2.89□□□□□ -1.95
LCB4YOR171C RDI1Q12434 202 aa2.89□□□□□ -1.95
LCB4YOR171C RAV1P47104 1357 aa2.89□□□□□ -1.95
LCB4YOR171C YOR304C-AO14468 76 aa2.88□□□□□ -1.95
LCB4YOR171C OPI3P05375 206 aa2.88□□□□□ -1.95
LCB4YOR171C YER190C-BP0CX94 160 aa2.88□□□□□ -1.95
LCB4YOR171C YEL077W-AP0CX95 160 aa2.88□□□□□ -1.95
LCB4YOR171C YGR296C-BP0CX96 160 aa2.88□□□□□ -1.95
LCB4YOR171C YPL283W-BP0CX97 160 aa2.88□□□□□ -1.95
LCB4YOR171C YPR204C-AP0CX98 160 aa2.88□□□□□ -1.95
LCB4YOR171C AMD1P15274 810 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C SLY1P22213 666 aa2.88□□□□□ -1.95
LCB4YOR171C TKL1P23254 680 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C CLB2P24869 491 aa2.88□□□□□ -1.95
LCB4YOR171C DCC1P25559 380 aa2.88□□□□□ -1.95
LCB4YOR171C CAT2P32796 670 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C MRPL6P32904 214 aa2.88□□□□□ -1.95
LCB4YOR171C YPT53P36019 220 aa2.88□□□□□ -1.95
LCB4YOR171C SWD2P36104 329 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms