RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG4	YMR107W	CDC21	P06785	304 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	HIS5	P07172	385 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	HTS1	P07263	546 aa	Known RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	PET9	P18239	318 aa	Known RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	RSA4	P25382	515 aa	Known RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	PMT1	P33775	817 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	TSA1	P34760	196 aa	Known RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	YNK1	P36010	153 aa	Known RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	YPT52	P36018	234 aa	Known RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	SRP102	P36057	244 aa	Predicted RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	YCR087C-A	P37263	153 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	FLR1	P38124	548 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	YBR284W	P38150	797 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	YPC1	P38298	316 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	NEM1	P38757	446 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	MEP1	P40260	492 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	FMC1	P40491	155 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	YIR016W	P40572	265 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	SLS1	P42900	643 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	TOM22	P49334	152 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	TIM21	P53220	239 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	PAU12	P53343	120 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	MEP3	P53390	489 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	MRPS17	Q03246	237 aa	Predicted RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	CUE4	Q04201	117 aa	Predicted RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	ECM22	Q05958	814 aa	Predicted RBP	4.88	□□□□□ -1.63
SPG4	YMR107W	CTR3	Q06686	241 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	MED7	Q08278	222 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	RDI1	Q12434	202 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	AGC1	Q12482	902 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	YCL001W-B	Q96VH2	84 aa		4.88	□□□□□ -1.63
SPG4	YMR107W	GAL80	P04387	435 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	GCD1	P09032	578 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	SST2	P11972	698 aa	Known RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	PPH21	P23594	369 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	PRE9	P23638	258 aa	Known RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	MIR1	P23641	311 aa	Known RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	BUD5	P25300	642 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	YCR100C	P25606	316 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	MRP17	P28778	131 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	ECM25	P32525	599 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SPG4	YMR107W	SSS1	P35179	80 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	MTH1	P35198	433 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SPG4	YMR107W	IRS4	P36115	615 aa	Known RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	MRPL28	P36527	147 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	RTT105	P40063	208 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	PMT6	P42934	759 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	SPO74	P45819	413 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	MOG1	P47123	218 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	BUL1	P48524	976 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	MTO1	P53070	669 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	YGL117W	P53133	265 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	GPI15	P53961	229 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	CYT2	Q00873	224 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	SRP1	Q02821	542 aa	Known RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	NRG1	Q03125	231 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	RIM13	Q03792	727 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	TY1A-DR2	Q03964	440 aa	Known RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	YDR415C	Q04033	374 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	SSL1	Q04673	461 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	RSF1	Q05043	376 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	LDB18	Q07887	179 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	TEN1	Q07921	160 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	FMP40	Q08968	688 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG4	YMR107W	PER33	Q12144	273 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	YLR118C	Q12354	227 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	ARP7	Q12406	477 aa		4.87	□□□□□ -1.63
SPG4	YMR107W	COX3	P00420	269 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	YAR066W	P0CX18	203 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	YHR214W	P0CX19	203 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	HOP1	P20050	605 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	FUN26	P31381	517 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	DSS4	P32601	143 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	YPT7	P32939	208 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	SNC2	P33328	115 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	SEF1	P34228	1148 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	OAR1	P35731	278 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	MRPL36	P36531	177 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	CHK1	P38147	527 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	FAT1	P38225	669 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	YHL041W	P38730	149 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	GPI16	P38875	610 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	YEL073C	P39974	107 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	SWM2	P40342	146 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	YIL165C	P40446	119 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	IRC24	P40580	263 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	PAU15	P40585	124 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	FAA4	P47912	694 aa	Known RBP	4.86	□□□□□ -1.63
SPG4	YMR107W	BNS1	P50084	137 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	YGR015C	P53208	328 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	ART5	P53244	586 aa	Known RBP	4.86	□□□□□ -1.63
SPG4	YMR107W	YGR117C	P53270	476 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	RNH70	P53331	553 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	OAZ1	Q02803	292 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	RPN4	Q03465	531 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	UTP15	Q04305	513 aa	Known RBP	4.86	□□□□□ -1.63
SPG4	YMR107W	GSF2	Q04697	403 aa	Known RBP	4.86	□□□□□ -1.63
SPG4	YMR107W	NMA1	Q06178	401 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 70.1 ms