RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C ZRT3P34240 503 aa3.81□□□□□ -1.8
CTF18YMR078C RPN14P53196 417 aa3.81□□□□□ -1.8
CTF18YMR078C DFM1Q12743 341 aaKnown RBP3.81□□□□□ -1.8
CTF18YMR078C IZH4Q99393 312 aa3.81□□□□□ -1.8
CTF18YMR078C RPC37P36121 282 aa3.8□□□□□ -1.8
CTF18YMR078C YMR262WP38430 313 aa3.8□□□□□ -1.8
CTF18YMR078C YFL012WP43580 148 aa3.8□□□□□ -1.8
CTF18YMR078C SWC4P53201 476 aa3.8□□□□□ -1.8
CTF18YMR078C RPS19AP07280 144 aaKnown RBP3.8□□□□□ -1.8
CTF18YMR078C RPS19BP07281 144 aaPredicted RBP3.8□□□□□ -1.8
CTF18YMR078C EBP2P36049 427 aaKnown RBP3.8□□□□□ -1.8
CTF18YMR078C HIT1P46973 164 aa3.8□□□□□ -1.8
CTF18YMR078C GMC1Q04399 608 aa3.8□□□□□ -1.8
CTF18YMR078C ASR1Q06834 288 aa3.8□□□□□ -1.8
CTF18YMR078C FRM2P37261 193 aa3.79□□□□□ -1.8
CTF18YMR078C VAB2P40003 282 aa3.79□□□□□ -1.8
CTF18YMR078C UFE1P41834 346 aa3.79□□□□□ -1.8
CTF18YMR078C MPP10P47083 593 aaKnown RBP3.79□□□□□ -1.8
CTF18YMR078C COQ5P49017 307 aa3.79□□□□□ -1.8
CTF18YMR078C YPL077CQ02831 240 aa3.79□□□□□ -1.8
CTF18YMR078C SEC13Q04491 297 aaKnown RBP3.79□□□□□ -1.8
CTF18YMR078C LAG2Q92325 660 aa3.79□□□□□ -1.8
CTF18YMR078C AUS1Q08409 1394 aa3.79□□□□□ -1.8
CTF18YMR078C YCR025CP25352 136 aa3.79□□□□□ -1.8
CTF18YMR078C YKL063CP35725 167 aa3.79□□□□□ -1.8
CTF18YMR078C PEX18P38855 283 aa3.79□□□□□ -1.8
CTF18YMR078C FLC3P53121 802 aa3.79□□□□□ -1.8
CTF18YMR078C SSA3P09435 649 aaKnown RBP3.78□□□□□ -1.8
CTF18YMR078C YER184CP39961 794 aa3.78□□□□□ -1.8
CTF18YMR078C ACT1P60010 375 aaKnown RBP3.78□□□□□ -1.8
CTF18YMR078C ECM11Q04110 302 aa3.78□□□□□ -1.8
CTF18YMR078C UTP15Q04305 513 aaKnown RBP3.78□□□□□ -1.8
CTF18YMR078C BER1Q06688 274 aaKnown RBP3.78□□□□□ -1.8
CTF18YMR078C TRM10Q12400 293 aa3.78□□□□□ -1.8
CTF18YMR078C NOP1P15646 327 aaKnown RBP3.78□□□□□ -1.8
CTF18YMR078C YNL040WP53960 456 aaPredicted RBP3.78□□□□□ -1.8
CTF18YMR078C ERP3Q12403 225 aa3.78□□□□□ -1.8
CTF18YMR078C PEX30Q06169 523 aa3.77□□□□□ -1.81
CTF18YMR078C CCH1P50077 2039 aa3.77□□□□□ -1.81
CTF18YMR078C TPO5P36029 618 aa3.76□□□□□ -1.81
CTF18YMR078C YPR064WQ12492 139 aa3.76□□□□□ -1.81
CTF18YMR078C FUS3P16892 353 aaKnown RBP3.76□□□□□ -1.81
CTF18YMR078C KEL2P50090 882 aa3.76□□□□□ -1.81
CTF18YMR078C YPT32P51996 222 aaKnown RBP3.76□□□□□ -1.81
CTF18YMR078C DIB1Q06819 143 aaPredicted RBP3.76□□□□□ -1.81
CTF18YMR078C YDL211CQ12121 372 aa3.76□□□□□ -1.81
CTF18YMR078C TFS1P14306 219 aa3.75□□□□□ -1.81
CTF18YMR078C BDH1P39714 382 aa3.75□□□□□ -1.81
CTF18YMR078C SCC4P40090 624 aa3.75□□□□□ -1.81
CTF18YMR078C LSB1P53281 241 aa3.75□□□□□ -1.81
CTF18YMR078C POM33Q12164 279 aa3.75□□□□□ -1.81
CTF18YMR078C YOR114WQ12219 294 aa3.75□□□□□ -1.81
CTF18YMR078C YAL063C-AQ3E791 96 aa3.75□□□□□ -1.81
CTF18YMR078C CDC14Q00684 551 aa3.75□□□□□ -1.81
CTF18YMR078C SPT4P32914 102 aaPredicted RBP3.74□□□□□ -1.81
CTF18YMR078C MBA1P38300 278 aa3.74□□□□□ -1.81
CTF18YMR078C SPP2Q02521 185 aa3.74□□□□□ -1.81
CTF18YMR078C TFC7Q12415 435 aa3.74□□□□□ -1.81
CTF18YMR078C IFM1P25038 676 aa3.74□□□□□ -1.81
CTF18YMR078C CDC13P32797 924 aaKnown RBP3.74□□□□□ -1.81
CTF18YMR078C TPN1P53099 579 aa3.74□□□□□ -1.81
CTF18YMR078C VBA1Q04301 562 aa3.74□□□□□ -1.81
CTF18YMR078C YLL007CQ07799 665 aa3.74□□□□□ -1.81
CTF18YMR078C VIK1Q12045 647 aa3.74□□□□□ -1.81
CTF18YMR078C RRP42Q12277 265 aaPredicted RBP3.74□□□□□ -1.81
CTF18YMR078C FRT2P39734 528 aa3.73□□□□□ -1.81
CTF18YMR078C MIC19P43594 170 aa3.73□□□□□ -1.81
CTF18YMR078C GPN3Q06543 272 aa3.73□□□□□ -1.81
CTF18YMR078C ICL1P28240 557 aaPredicted RBP3.72□□□□□ -1.81
CTF18YMR078C GCG1P32656 232 aaKnown RBP3.72□□□□□ -1.81
CTF18YMR078C MRPL37P36532 105 aa3.72□□□□□ -1.81
CTF18YMR078C HST4P53688 370 aa3.72□□□□□ -1.81
CTF18YMR078C SMD1Q02260 146 aaPredicted RBP3.72□□□□□ -1.81
CTF18YMR078C KAP95Q06142 861 aaKnown RBP3.72□□□□□ -1.81
CTF18YMR078C LOA1Q06508 300 aa3.72□□□□□ -1.81
CTF18YMR078C DAL81P21657 970 aa3.72□□□□□ -1.81
CTF18YMR078C YSR3P23501 404 aa3.72□□□□□ -1.81
CTF18YMR078C AEP1P32493 518 aa3.72□□□□□ -1.81
CTF18YMR078C YGL118CP53132 145 aa3.72□□□□□ -1.81
CTF18YMR078C MRX8Q05473 314 aa3.72□□□□□ -1.81
CTF18YMR078C DPP1Q05521 289 aa3.72□□□□□ -1.81
CTF18YMR078C YPL278CQ08990 100 aa3.72□□□□□ -1.81
CTF18YMR078C VPH2P32341 215 aa3.71□□□□□ -1.82
CTF18YMR078C SLX1P38324 304 aa3.71□□□□□ -1.82
CTF18YMR078C CSI1Q04368 295 aa3.71□□□□□ -1.82
CTF18YMR078C RPT5P33297 434 aaKnown RBP3.71□□□□□ -1.82
CTF18YMR078C DED81P38707 554 aaKnown RBP3.71□□□□□ -1.82
CTF18YMR078C TRR2P38816 342 aa3.71□□□□□ -1.82
CTF18YMR078C PET494P07390 489 aaPredicted RBP3.7□□□□□ -1.82
CTF18YMR078C CDC42P19073 191 aa3.7□□□□□ -1.82
CTF18YMR078C CKA2P19454 339 aa3.7□□□□□ -1.82
CTF18YMR078C RCY1P39531 840 aa3.7□□□□□ -1.82
CTF18YMR078C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
CTF18YMR078C FAB1P34756 2278 aa3.7□□□□□ -1.82
CTF18YMR078C ILV1P00927 576 aaKnown RBP3.7□□□□□ -1.82
CTF18YMR078C CPT1P17898 393 aa3.7□□□□□ -1.82
CTF18YMR078C ATG15P25641 520 aa3.7□□□□□ -1.82
CTF18YMR078C ZIP1P31111 875 aa3.7□□□□□ -1.82
CTF18YMR078C SKG6P32900 734 aaPredicted RBP3.7□□□□□ -1.82
CTF18YMR078C ASP1P38986 381 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms