RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YOL114CQ12322 202 aa9.31□□□□□ -0.92
SHM2YLR058C YGL041W-AP0C5N3 154 aa9.31□□□□□ -0.92
SHM2YLR058C NFT1P0CE68 1218 aa9.31□□□□□ -0.92
SHM2YLR058C STE12P13574 688 aa9.31□□□□□ -0.92
SHM2YLR058C CPR2P23285 205 aa9.31□□□□□ -0.92
SHM2YLR058C RPL24BP24000 155 aaKnown RBP9.31□□□□□ -0.92
SHM2YLR058C SDP1P40479 209 aa9.31□□□□□ -0.92
SHM2YLR058C NOG1Q02892 647 aaKnown RBP9.31□□□□□ -0.92
SHM2YLR058C FDC1Q03034 503 aa9.31□□□□□ -0.92
SHM2YLR058C GRX3Q03835 250 aa9.31□□□□□ -0.92
SHM2YLR058C AGE1Q04412 482 aa9.31□□□□□ -0.92
SHM2YLR058C MRPL51Q06090 140 aaPredicted RBP9.31□□□□□ -0.92
SHM2YLR058C IPK1Q06667 281 aa9.31□□□□□ -0.92
SHM2YLR058C IES3Q12345 250 aa9.31□□□□□ -0.92
SHM2YLR058C HMS1Q12398 434 aa9.31□□□□□ -0.92
SHM2YLR058C Q0144Q9ZZW2 109 aa9.31□□□□□ -0.92
SHM2YLR058C BLM10P43583 2143 aa9.3□□□□□ -0.92
SHM2YLR058C UTR1P21373 530 aa9.3□□□□□ -0.92
SHM2YLR058C THI4P32318 326 aa9.3□□□□□ -0.92
SHM2YLR058C MCM10P32354 571 aa9.3□□□□□ -0.92
SHM2YLR058C PUB1P32588 453 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
SHM2YLR058C SDS22P36047 338 aa9.3□□□□□ -0.92
SHM2YLR058C AMN1P38285 549 aaPredicted RBP9.3□□□□□ -0.92
SHM2YLR058C CHS7P38843 316 aa9.3□□□□□ -0.92
SHM2YLR058C MNN5P46982 586 aa9.3□□□□□ -0.92
SHM2YLR058C BPL1P48445 690 aaPredicted RBP9.3□□□□□ -0.92
SHM2YLR058C APM1Q00776 475 aaPredicted RBP9.3□□□□□ -0.92
SHM2YLR058C RSM24Q03976 319 aa9.3□□□□□ -0.92
SHM2YLR058C BNA7Q04066 261 aa9.3□□□□□ -0.92
SHM2YLR058C MGR3Q04472 501 aa9.3□□□□□ -0.92
SHM2YLR058C YDL114WQ07530 308 aa9.3□□□□□ -0.92
SHM2YLR058C AIM6Q07716 390 aa9.3□□□□□ -0.92
SHM2YLR058C NIP7Q08962 181 aaKnown RBP9.3□□□□□ -0.92
SHM2YLR058C SFG1Q12507 346 aa9.3□□□□□ -0.92
SHM2YLR058C REP1P03871 373 aa9.29□□□□□ -0.92
SHM2YLR058C OPI3P05375 206 aa9.29□□□□□ -0.92
SHM2YLR058C MTC2P34246 357 aa9.29□□□□□ -0.92
SHM2YLR058C UTP11P34247 250 aaPredicted RBP9.29□□□□□ -0.92
SHM2YLR058C THI2P38141 450 aa9.29□□□□□ -0.92
SHM2YLR058C FMP23P38231 175 aa9.29□□□□□ -0.92
SHM2YLR058C POP1P41812 875 aa9.29□□□□□ -0.92
SHM2YLR058C YAE1P47118 141 aaPredicted RBP9.29□□□□□ -0.92
SHM2YLR058C MSY1P48527 492 aa9.29□□□□□ -0.92
SHM2YLR058C SAY1P53324 424 aa9.29□□□□□ -0.92
SHM2YLR058C SRL4Q03085 281 aa9.29□□□□□ -0.92
SHM2YLR058C MIM1Q08176 113 aa9.29□□□□□ -0.92
SHM2YLR058C PBS2P08018 668 aa9.28□□□□□ -0.92
SHM2YLR058C RPA135P22138 1203 aaKnown RBP9.28□□□□□ -0.92
SHM2YLR058C STE50P25344 346 aa9.28□□□□□ -0.92
SHM2YLR058C PUT3P25502 979 aaPredicted RBP9.28□□□□□ -0.92
SHM2YLR058C SBA1P28707 216 aaKnown RBP9.28□□□□□ -0.92
SHM2YLR058C JLP2P40206 208 aa9.28□□□□□ -0.92
SHM2YLR058C PAU12P53343 120 aa9.28□□□□□ -0.92
SHM2YLR058C BSC5P53755 489 aa9.28□□□□□ -0.92
SHM2YLR058C TY1A-NL1Q12391 440 aaKnown RBP9.28□□□□□ -0.92
SHM2YLR058C SEC16P48415 2195 aaKnown RBP9.27□□□□□ -0.92
SHM2YLR058C YEL009C-AA0A023PZF2 135 aa9.27□□□□□ -0.93
SHM2YLR058C RPS13P05756 151 aaKnown RBP9.27□□□□□ -0.93
SHM2YLR058C PRE7P23724 241 aaKnown RBP9.27□□□□□ -0.93
SHM2YLR058C CAM1P29547 415 aaKnown RBP9.27□□□□□ -0.93
SHM2YLR058C ERG9P29704 444 aa9.27□□□□□ -0.93
SHM2YLR058C FUN26P31381 517 aa9.27□□□□□ -0.93
SHM2YLR058C YBR063CP38083 404 aa9.27□□□□□ -0.93
SHM2YLR058C GPX2P38143 162 aa9.27□□□□□ -0.93
SHM2YLR058C YJL218WP40892 196 aaKnown RBP9.27□□□□□ -0.93
SHM2YLR058C PAM16P42949 149 aa9.27□□□□□ -0.93
SHM2YLR058C MKC7P53379 596 aa9.27□□□□□ -0.93
SHM2YLR058C RBS1Q05672 457 aaKnown RBP9.27□□□□□ -0.93
SHM2YLR058C CTS2Q06350 511 aa9.27□□□□□ -0.93
SHM2YLR058C YOR378WQ08902 515 aa9.27□□□□□ -0.93
SHM2YLR058C ACF2Q12168 779 aa9.27□□□□□ -0.93
SHM2YLR058C YHR214C-EQ8TGK0 99 aa9.27□□□□□ -0.93
SHM2YLR058C PDE2P06776 526 aa9.26□□□□□ -0.93
SHM2YLR058C CBP6P07253 162 aaPredicted RBP9.26□□□□□ -0.93
SHM2YLR058C GIT1P25346 518 aa9.26□□□□□ -0.93
SHM2YLR058C BOS1P25385 244 aa9.26□□□□□ -0.93
SHM2YLR058C PAU24P38155 120 aa9.26□□□□□ -0.93
SHM2YLR058C YGR054WP53235 642 aaKnown RBP9.26□□□□□ -0.93
SHM2YLR058C YDR102CQ03864 110 aa9.26□□□□□ -0.93
SHM2YLR058C GAS2Q06135 555 aa9.26□□□□□ -0.93
SHM2YLR058C YPR1Q12458 312 aa9.26□□□□□ -0.93
SHM2YLR058C FRE6Q12473 712 aa9.26□□□□□ -0.93
SHM2YLR058C CUP1-1P0CX80 61 aa9.25□□□□□ -0.93
SHM2YLR058C CUP1-2P0CX81 61 aa9.25□□□□□ -0.93
SHM2YLR058C EXG1P23776 448 aaKnown RBP9.25□□□□□ -0.93
SHM2YLR058C CLB2P24869 491 aa9.25□□□□□ -0.93
SHM2YLR058C SOF1P33750 489 aaKnown RBP9.25□□□□□ -0.93
SHM2YLR058C RSM22P36056 628 aa9.25□□□□□ -0.93
SHM2YLR058C AIM3P38266 947 aaKnown RBP9.25□□□□□ -0.93
SHM2YLR058C MGE1P38523 228 aa9.25□□□□□ -0.93
SHM2YLR058C GDS1P41913 522 aa9.25□□□□□ -0.93
SHM2YLR058C PMT6P42934 759 aa9.25□□□□□ -0.93
SHM2YLR058C CPR8P53728 308 aa9.25□□□□□ -0.93
SHM2YLR058C KAP120Q02932 1032 aa9.25□□□□□ -0.93
SHM2YLR058C RCF1Q03713 159 aa9.25□□□□□ -0.93
SHM2YLR058C HLR1Q04429 423 aa9.25□□□□□ -0.93
SHM2YLR058C YMR252CQ04814 134 aa9.25□□□□□ -0.93
SHM2YLR058C TY1A-BLQ12266 440 aa9.25□□□□□ -0.93
SHM2YLR058C SIR2P06700 562 aa9.24□□□□□ -0.93
SHM2YLR058C HMG1P12683 1054 aa9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms