RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C PMT4P46971 762 aa5.36□□□□□ -1.55
SSK1YLR006C YGR149WP48236 432 aa5.36□□□□□ -1.55
SSK1YLR006C SDH1Q00711 640 aa5.36□□□□□ -1.55
SSK1YLR006C EKI1Q03764 534 aa5.36□□□□□ -1.55
SSK1YLR006C STP3Q05937 343 aa5.36□□□□□ -1.55
SSK1YLR006C YPR022CQ12139 1133 aa5.36□□□□□ -1.55
SSK1YLR006C YPR011CQ12251 326 aa5.36□□□□□ -1.55
SSK1YLR006C YLR422WQ06409 1932 aa5.36□□□□□ -1.55
SSK1YLR006C ADH2P00331 348 aaKnown RBP5.36□□□□□ -1.55
SSK1YLR006C QCR2P07257 368 aa5.36□□□□□ -1.55
SSK1YLR006C IDP1P21954 428 aaKnown RBP5.36□□□□□ -1.55
SSK1YLR006C CPR4P25334 318 aa5.36□□□□□ -1.55
SSK1YLR006C PEX34P25584 144 aa5.36□□□□□ -1.55
SSK1YLR006C PRE4P30657 266 aa5.36□□□□□ -1.55
SSK1YLR006C UTP30P36144 274 aaKnown RBP5.36□□□□□ -1.55
SSK1YLR006C PRP39P39682 629 aaKnown RBP5.36□□□□□ -1.55
SSK1YLR006C DDI1P40087 428 aa5.36□□□□□ -1.55
SSK1YLR006C SER2P42941 309 aa5.36□□□□□ -1.55
SSK1YLR006C YFR057WP43625 151 aa5.36□□□□□ -1.55
SSK1YLR006C BIR1P47134 954 aa5.36□□□□□ -1.55
SSK1YLR006C LYS20P48570 428 aaKnown RBP5.36□□□□□ -1.55
SSK1YLR006C SEH1P53011 349 aaKnown RBP5.36□□□□□ -1.55
SSK1YLR006C BUD9P53226 547 aa5.36□□□□□ -1.55
SSK1YLR006C HST3P53687 447 aa5.36□□□□□ -1.55
SSK1YLR006C MPS1P54199 764 aa5.36□□□□□ -1.55
SSK1YLR006C IRC15Q02733 499 aa5.36□□□□□ -1.55
SSK1YLR006C YPL080CQ02826 108 aa5.36□□□□□ -1.55
SSK1YLR006C YPR114WQ06107 315 aa5.36□□□□□ -1.55
SSK1YLR006C RXT3Q07458 294 aa5.36□□□□□ -1.55
SSK1YLR006C LYS21Q12122 440 aaKnown RBP5.36□□□□□ -1.55
SSK1YLR006C HTZ1Q12692 134 aaKnown RBP5.36□□□□□ -1.55
SSK1YLR006C YDR524C-BQ3E6R4 66 aa5.36□□□□□ -1.55
SSK1YLR006C YKL183C-AQ3E765 70 aa5.36□□□□□ -1.55
SSK1YLR006C DFG16Q99234 619 aa5.36□□□□□ -1.55
SSK1YLR006C YAR066WP0CX18 203 aa5.35□□□□□ -1.55
SSK1YLR006C YHR214WP0CX19 203 aa5.35□□□□□ -1.55
SSK1YLR006C CAP2P13517 287 aa5.35□□□□□ -1.55
SSK1YLR006C HSP30P25619 332 aa5.35□□□□□ -1.55
SSK1YLR006C PCL5P38794 229 aa5.35□□□□□ -1.55
SSK1YLR006C SEC24P40482 926 aaKnown RBP5.35□□□□□ -1.55
SSK1YLR006C SLS1P42900 643 aa5.35□□□□□ -1.55
SSK1YLR006C CTK2P46962 323 aa5.35□□□□□ -1.55
SSK1YLR006C SSY5P47002 699 aa5.35□□□□□ -1.55
SSK1YLR006C YJR149WP47177 404 aa5.35□□□□□ -1.55
SSK1YLR006C YGR168CP53293 376 aa5.35□□□□□ -1.55
SSK1YLR006C YLR046CQ12253 270 aa5.35□□□□□ -1.55
SSK1YLR006C ARF2P19146 181 aaKnown RBP5.35□□□□□ -1.55
SSK1YLR006C SAR1P20606 190 aaKnown RBP5.35□□□□□ -1.55
SSK1YLR006C YPS1P32329 569 aa5.35□□□□□ -1.55
SSK1YLR006C RPC34P32910 317 aa5.35□□□□□ -1.55
SSK1YLR006C TCD2P36101 447 aaKnown RBP5.35□□□□□ -1.55
SSK1YLR006C ASC1P38011 319 aaKnown RBP5.35□□□□□ -1.55
SSK1YLR006C FMP23P38231 175 aa5.35□□□□□ -1.55
SSK1YLR006C MIC12P38341 106 aa5.35□□□□□ -1.55
SSK1YLR006C UBA4P38820 440 aa5.35□□□□□ -1.55
SSK1YLR006C SEN34P39707 275 aa5.35□□□□□ -1.55
SSK1YLR006C BTT1P40314 149 aaPredicted RBP5.35□□□□□ -1.55
SSK1YLR006C PRM10P42946 383 aa5.35□□□□□ -1.55
SSK1YLR006C YNR066CP53752 436 aa5.35□□□□□ -1.55
SSK1YLR006C PIR1Q03178 341 aa5.35□□□□□ -1.55
SSK1YLR006C YMR206WQ03695 313 aa5.35□□□□□ -1.55
SSK1YLR006C YPR196WQ06595 470 aa5.35□□□□□ -1.55
SSK1YLR006C YLR036CQ07986 203 aa5.35□□□□□ -1.55
SSK1YLR006C TMS1Q12116 473 aa5.35□□□□□ -1.55
SSK1YLR006C RGT2Q12300 763 aa5.35□□□□□ -1.55
SSK1YLR006C MHT1Q12525 324 aa5.35□□□□□ -1.55
SSK1YLR006C YDR157WA0A023PZE8 133 aa5.34□□□□□ -1.55
SSK1YLR006C ADE5,7P07244 802 aaKnown RBP5.34□□□□□ -1.55
SSK1YLR006C ALG7P07286 448 aa5.34□□□□□ -1.55
SSK1YLR006C DAT1P13483 248 aaKnown RBP5.34□□□□□ -1.55
SSK1YLR006C CHA1P25379 360 aaKnown RBP5.34□□□□□ -1.55
SSK1YLR006C PRS4P38063 326 aaPredicted RBP5.34□□□□□ -1.55
SSK1YLR006C SSN3P39073 555 aa5.34□□□□□ -1.55
SSK1YLR006C TIM17P39515 158 aa5.34□□□□□ -1.55
SSK1YLR006C RRG9P40156 214 aa5.34□□□□□ -1.55
SSK1YLR006C VHS2P40463 436 aa5.34□□□□□ -1.55
SSK1YLR006C SER33P40510 469 aa5.34□□□□□ -1.55
SSK1YLR006C YHC3P47040 408 aa5.34□□□□□ -1.55
SSK1YLR006C STE24P47154 453 aa5.34□□□□□ -1.55
SSK1YLR006C MUP1P50276 574 aa5.34□□□□□ -1.55
SSK1YLR006C ARO8P53090 500 aaKnown RBP5.34□□□□□ -1.55
SSK1YLR006C BIO5P53744 561 aaKnown RBP5.34□□□□□ -1.55
SSK1YLR006C YNR065CP53751 1116 aa5.34□□□□□ -1.55
SSK1YLR006C IZH1Q03419 316 aa5.34□□□□□ -1.55
SSK1YLR006C MRI1Q06489 411 aaKnown RBP5.34□□□□□ -1.55
SSK1YLR006C AIM6Q07716 390 aa5.34□□□□□ -1.55
SSK1YLR006C NDD1Q08887 554 aa5.34□□□□□ -1.55
SSK1YLR006C RLM1Q12224 676 aa5.34□□□□□ -1.55
SSK1YLR006C STE18P18852 110 aa5.33□□□□□ -1.56
SSK1YLR006C RFA3P26755 122 aaKnown RBP5.33□□□□□ -1.56
SSK1YLR006C RNP1P32385 249 aa5.33□□□□□ -1.56
SSK1YLR006C PAD1P33751 242 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SSK1YLR006C MCH2P36032 473 aa5.33□□□□□ -1.56
SSK1YLR006C MNN2P38069 597 aa5.33□□□□□ -1.56
SSK1YLR006C INM1P38710 295 aa5.33□□□□□ -1.56
SSK1YLR006C PRE6P40303 254 aaKnown RBP5.33□□□□□ -1.56
SSK1YLR006C MRX5P47007 382 aa5.33□□□□□ -1.56
SSK1YLR006C YJR030CP47101 745 aa5.33□□□□□ -1.56
SSK1YLR006C JHD2P47156 728 aaPredicted RBP5.33□□□□□ -1.56
SSK1YLR006C YMR130WQ04223 302 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms