RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W RLM1Q12224 676 aa3.38□□□□□ -1.87
SSL1YLR005W MF(ALPHA)1P01149 165 aa3.37□□□□□ -1.87
SSL1YLR005W ARG3P05150 338 aa3.37□□□□□ -1.87
SSL1YLR005W SUI3P09064 285 aaKnown RBP3.37□□□□□ -1.87
SSL1YLR005W RPL35AP0CX84 120 aaKnown RBP3.37□□□□□ -1.87
SSL1YLR005W RPL35BP0CX85 120 aaKnown RBP3.37□□□□□ -1.87
SSL1YLR005W TFS1P14306 219 aa3.37□□□□□ -1.87
SSL1YLR005W EXO70P19658 623 aa3.37□□□□□ -1.87
SSL1YLR005W HCS1P34243 683 aa3.37□□□□□ -1.87
SSL1YLR005W GPX1P36014 167 aa3.37□□□□□ -1.87
SSL1YLR005W RCK1P38622 512 aa3.37□□□□□ -1.87
SSL1YLR005W ECM34P38728 170 aa3.37□□□□□ -1.87
SSL1YLR005W HIS6P40545 261 aa3.37□□□□□ -1.87
SSL1YLR005W YIL012WP40551 113 aa3.37□□□□□ -1.87
SSL1YLR005W MET28P40573 187 aa3.37□□□□□ -1.87
SSL1YLR005W BUD8P41698 603 aa3.37□□□□□ -1.87
SSL1YLR005W IAH1P41734 238 aa3.37□□□□□ -1.87
SSL1YLR005W YGR201CP42936 225 aa3.37□□□□□ -1.87
SSL1YLR005W MOB2P43563 287 aa3.37□□□□□ -1.87
SSL1YLR005W ABM1P47146 123 aa3.37□□□□□ -1.87
SSL1YLR005W DIA3P52290 468 aa3.37□□□□□ -1.87
SSL1YLR005W SBH2P52871 88 aa3.37□□□□□ -1.87
SSL1YLR005W PET191Q02772 108 aa3.37□□□□□ -1.87
SSL1YLR005W KAP120Q02932 1032 aa3.37□□□□□ -1.87
SSL1YLR005W YML119WQ03208 357 aa3.37□□□□□ -1.87
SSL1YLR005W CTL1Q03220 320 aaKnown RBP3.37□□□□□ -1.87
SSL1YLR005W KRE28Q04431 385 aa3.37□□□□□ -1.87
SSL1YLR005W MFG1Q07684 458 aa3.37□□□□□ -1.87
SSL1YLR005W YPL191CQ08930 360 aa3.37□□□□□ -1.87
SSL1YLR005W RTC5Q12108 567 aaKnown RBP3.37□□□□□ -1.87
SSL1YLR005W YPT6Q99260 215 aa3.37□□□□□ -1.87
SSL1YLR005W CCW14O13547 238 aa3.36□□□□□ -1.87
SSL1YLR005W REP1P03871 373 aa3.36□□□□□ -1.87
SSL1YLR005W SPO7P18410 259 aa3.36□□□□□ -1.87
SSL1YLR005W ERD2P18414 219 aa3.36□□□□□ -1.87
SSL1YLR005W CCA1P21269 546 aa3.36□□□□□ -1.87
SSL1YLR005W TRS65P32893 560 aa3.36□□□□□ -1.87
SSL1YLR005W SOF1P33750 489 aaKnown RBP3.36□□□□□ -1.87
SSL1YLR005W IST2P38250 946 aa3.36□□□□□ -1.87
SSL1YLR005W RRP4P38792 359 aaKnown RBP3.36□□□□□ -1.87
SSL1YLR005W MTC6P38849 526 aa3.36□□□□□ -1.87
SSL1YLR005W YER188WP40103 239 aa3.36□□□□□ -1.87
SSL1YLR005W LAS21P40367 830 aa3.36□□□□□ -1.87
SSL1YLR005W TDA10P42938 290 aa3.36□□□□□ -1.87
SSL1YLR005W NUP57P48837 541 aa3.36□□□□□ -1.87
SSL1YLR005W SIP18P50263 79 aa3.36□□□□□ -1.87
SSL1YLR005W RCE1Q03530 315 aa3.36□□□□□ -1.87
SSL1YLR005W RAD33Q04231 177 aa3.36□□□□□ -1.87
SSL1YLR005W SPO77Q06134 477 aa3.36□□□□□ -1.87
SSL1YLR005W SYO1Q07395 620 aa3.36□□□□□ -1.87
SSL1YLR005W PSR1Q07800 427 aa3.36□□□□□ -1.87
SSL1YLR005W COQ10Q08058 207 aa3.36□□□□□ -1.87
SSL1YLR005W DCI1Q08558 271 aa3.36□□□□□ -1.87
SSL1YLR005W SRL2Q12020 392 aa3.36□□□□□ -1.87
SSL1YLR005W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
SSL1YLR005W SET6Q12529 373 aa3.36□□□□□ -1.87
SSL1YLR005W RPS23AP0CX29 145 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W RPS23BP0CX30 145 aa3.35□□□□□ -1.87
SSL1YLR005W CNA1P23287 553 aa3.35□□□□□ -1.87
SSL1YLR005W EXG1P23776 448 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W HSP30P25619 332 aa3.35□□□□□ -1.87
SSL1YLR005W RPB9P27999 122 aa3.35□□□□□ -1.87
SSL1YLR005W PTP2P29461 750 aa3.35□□□□□ -1.87
SSL1YLR005W ITR2P30606 609 aa3.35□□□□□ -1.87
SSL1YLR005W ATP7P30902 174 aa3.35□□□□□ -1.87
SSL1YLR005W SNC1P31109 117 aa3.35□□□□□ -1.87
SSL1YLR005W ASF2P32448 525 aaPredicted RBP3.35□□□□□ -1.87
SSL1YLR005W MSN4P33749 630 aa3.35□□□□□ -1.87
SSL1YLR005W NUF2P33895 451 aa3.35□□□□□ -1.87
SSL1YLR005W SWH1P35845 1188 aa3.35□□□□□ -1.87
SSL1YLR005W JEN1P36035 616 aa3.35□□□□□ -1.87
SSL1YLR005W YBR096WP38256 230 aa3.35□□□□□ -1.87
SSL1YLR005W PEX18P38855 283 aa3.35□□□□□ -1.87
SSL1YLR005W RCY1P39531 840 aa3.35□□□□□ -1.87
SSL1YLR005W GDI1P39958 451 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W YNL208WP40159 199 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W ADO1P47143 340 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W YGL117WP53133 265 aa3.35□□□□□ -1.87
SSL1YLR005W RBG2P53295 368 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W MPP6P53725 186 aaPredicted RBP3.35□□□□□ -1.87
SSL1YLR005W IGO1P53897 168 aa3.35□□□□□ -1.87
SSL1YLR005W MTQ1P53944 314 aa3.35□□□□□ -1.87
SSL1YLR005W SUB1P54000 292 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W SVL3Q03088 825 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W YMR102CQ03177 834 aa3.35□□□□□ -1.87
SSL1YLR005W RSM28Q03430 361 aa3.35□□□□□ -1.87
SSL1YLR005W SCS7Q03529 384 aa3.35□□□□□ -1.87
SSL1YLR005W FMN1Q03778 218 aa3.35□□□□□ -1.87
SSL1YLR005W HSP31Q04432 237 aa3.35□□□□□ -1.87
SSL1YLR005W STP4Q07351 490 aa3.35□□□□□ -1.87
SSL1YLR005W NGL1Q08213 363 aaKnown RBP3.35□□□□□ -1.87
SSL1YLR005W APC2Q12440 853 aa3.35□□□□□ -1.87
SSL1YLR005W ATP6P00854 259 aa3.34□□□□□ -1.88
SSL1YLR005W YMR085WP0CF18 432 aa3.34□□□□□ -1.88
SSL1YLR005W SEC12P11655 471 aa3.34□□□□□ -1.88
SSL1YLR005W URE2P23202 354 aaKnown RBP3.34□□□□□ -1.88
SSL1YLR005W CAM1P29547 415 aaKnown RBP3.34□□□□□ -1.88
SSL1YLR005W LHP1P33399 275 aaKnown RBP3.34□□□□□ -1.88
SSL1YLR005W SIP2P34164 415 aaKnown RBP3.34□□□□□ -1.88
SSL1YLR005W YKL071WP36086 256 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms