RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C RGM1Q00453 211 aa2.54□□□□□ -2
RPF2YKR081C UTP23Q12339 254 aaKnown RBP2.54□□□□□ -2
RPF2YKR081C VPS1P21576 704 aaKnown RBP2.53□□□□□ -2
RPF2YKR081C IFM1P25038 676 aa2.53□□□□□ -2
RPF2YKR081C SMI1P32566 505 aa2.53□□□□□ -2
RPF2YKR081C GPX1P36014 167 aa2.53□□□□□ -2
RPF2YKR081C ATG12P38316 186 aa2.53□□□□□ -2
RPF2YKR081C UTP25P40498 721 aaKnown RBP2.53□□□□□ -2
RPF2YKR081C NAS2P40555 220 aa2.53□□□□□ -2
RPF2YKR081C YFL064CP43540 174 aa2.53□□□□□ -2
RPF2YKR081C YLR446WQ06204 433 aa2.53□□□□□ -2
RPF2YKR081C CDD1Q06549 142 aa2.53□□□□□ -2
RPF2YKR081C DCP1Q12517 231 aaPredicted RBP2.53□□□□□ -2
RPF2YKR081C VPH1P32563 840 aaKnown RBP2.52□□□□□ -2.01
RPF2YKR081C GCG1P32656 232 aaKnown RBP2.52□□□□□ -2.01
RPF2YKR081C ZRT1P32804 376 aa2.52□□□□□ -2.01
RPF2YKR081C OKP1P53298 406 aa2.52□□□□□ -2.01
RPF2YKR081C PFK27Q12471 397 aaPredicted RBP2.52□□□□□ -2.01
RPF2YKR081C MCH2P36032 473 aa2.51□□□□□ -2.01
RPF2YKR081C YNL095CP53932 642 aa2.51□□□□□ -2.01
RPF2YKR081C STE23Q06010 1027 aa2.51□□□□□ -2.01
RPF2YKR081C YAL063C-AQ3E791 96 aa2.51□□□□□ -2.01
RPF2YKR081C SPT7P35177 1332 aa2.5□□□□□ -2.01
RPF2YKR081C YPS1P32329 569 aa2.5□□□□□ -2.01
RPF2YKR081C SWI3P32591 825 aa2.5□□□□□ -2.01
RPF2YKR081C CDC13P32797 924 aaKnown RBP2.5□□□□□ -2.01
RPF2YKR081C YKL162CP36052 402 aa2.5□□□□□ -2.01
RPF2YKR081C YGP1P38616 354 aaKnown RBP2.5□□□□□ -2.01
RPF2YKR081C OSH6Q02201 448 aa2.5□□□□□ -2.01
RPF2YKR081C YPL278CQ08990 100 aa2.5□□□□□ -2.01
RPF2YKR081C SNF6P18888 332 aa2.49□□□□□ -2.01
RPF2YKR081C BLI1P35727 113 aa2.49□□□□□ -2.01
RPF2YKR081C TPO5P36029 618 aa2.49□□□□□ -2.01
RPF2YKR081C CAB3P36076 571 aa2.49□□□□□ -2.01
RPF2YKR081C YIL012WP40551 113 aa2.49□□□□□ -2.01
RPF2YKR081C SAM4Q08985 325 aaKnown RBP2.49□□□□□ -2.01
RPF2YKR081C TIM22Q12328 207 aa2.49□□□□□ -2.01
RPF2YKR081C MRPL3P36516 390 aa2.48□□□□□ -2.01
RPF2YKR081C YBR062CP38239 180 aa2.48□□□□□ -2.01
RPF2YKR081C PCL7P40186 285 aa2.48□□□□□ -2.01
RPF2YKR081C SYS1P41544 203 aa2.48□□□□□ -2.01
RPF2YKR081C PRP24P49960 444 aaKnown RBP2.48□□□□□ -2.01
RPF2YKR081C SWC4P53201 476 aa2.48□□□□□ -2.01
RPF2YKR081C SYF2P53277 215 aaPredicted RBP2.48□□□□□ -2.01
RPF2YKR081C RSM27P53305 110 aa2.48□□□□□ -2.01
RPF2YKR081C PRR2Q12310 699 aa2.48□□□□□ -2.01
RPF2YKR081C RPL16BP26785 198 aaKnown RBP2.47□□□□□ -2.01
RPF2YKR081C IMP1P28627 190 aa2.47□□□□□ -2.01
RPF2YKR081C YBL081WP38180 368 aaKnown RBP2.47□□□□□ -2.01
RPF2YKR081C UBC13P52490 153 aa2.47□□□□□ -2.01
RPF2YKR081C YGR266WP53326 701 aa2.47□□□□□ -2.01
RPF2YKR081C IZH4Q99393 312 aa2.47□□□□□ -2.01
RPF2YKR081C CDC37P06101 506 aaKnown RBP2.46□□□□□ -2.02
RPF2YKR081C PHO80P20052 293 aa2.46□□□□□ -2.02
RPF2YKR081C YPC1P38298 316 aa2.46□□□□□ -2.02
RPF2YKR081C MED6P38782 295 aa2.46□□□□□ -2.02
RPF2YKR081C AVT6P40074 448 aa2.46□□□□□ -2.02
RPF2YKR081C MNN5P46982 586 aa2.46□□□□□ -2.02
RPF2YKR081C MIG2P53035 382 aa2.46□□□□□ -2.02
RPF2YKR081C NNT1Q05874 261 aa2.46□□□□□ -2.02
RPF2YKR081C YDL144CQ07589 356 aa2.46□□□□□ -2.02
RPF2YKR081C YPR1Q12458 312 aa2.46□□□□□ -2.02
RPF2YKR081C ZWF1P11412 505 aaKnown RBP2.45□□□□□ -2.02
RPF2YKR081C MSS116P15424 664 aaKnown RBP2.45□□□□□ -2.02
RPF2YKR081C YCR025CP25352 136 aa2.45□□□□□ -2.02
RPF2YKR081C IMP3P32899 183 aaPredicted RBP2.45□□□□□ -2.02
RPF2YKR081C CAJ1P39101 391 aa2.45□□□□□ -2.02
RPF2YKR081C VAB2P40003 282 aa2.45□□□□□ -2.02
RPF2YKR081C KRE29P40026 464 aa2.45□□□□□ -2.02
RPF2YKR081C AIM20P40451 204 aa2.45□□□□□ -2.02
RPF2YKR081C ALG9P53868 555 aaKnown RBP2.45□□□□□ -2.02
RPF2YKR081C CAB5Q03941 241 aa2.45□□□□□ -2.02
RPF2YKR081C PBP4Q07362 185 aaKnown RBP2.45□□□□□ -2.02
RPF2YKR081C TRM7P38238 310 aaKnown RBP2.44□□□□□ -2.02
RPF2YKR081C YER188WP40103 239 aa2.44□□□□□ -2.02
RPF2YKR081C RPL31AP0C2H8 113 aaKnown RBP2.43□□□□□ -2.02
RPF2YKR081C PET18P25362 215 aa2.43□□□□□ -2.02
RPF2YKR081C MBA1P38300 278 aa2.43□□□□□ -2.02
RPF2YKR081C SWC5P38326 303 aa2.43□□□□□ -2.02
RPF2YKR081C FET3P38993 636 aa2.43□□□□□ -2.02
RPF2YKR081C APC9Q12107 265 aa2.43□□□□□ -2.02
RPF2YKR081C RRP42Q12277 265 aaPredicted RBP2.43□□□□□ -2.02
RPF2YKR081C PAA1Q12447 191 aaKnown RBP2.43□□□□□ -2.02
RPF2YKR081C HIS3P06633 220 aa2.42□□□□□ -2.02
RPF2YKR081C END3P39013 349 aa2.42□□□□□ -2.02
RPF2YKR081C SSO2P39926 295 aa2.42□□□□□ -2.02
RPF2YKR081C TVP15Q03860 143 aa2.42□□□□□ -2.02
RPF2YKR081C YLR297WQ05899 129 aa2.42□□□□□ -2.02
RPF2YKR081C OSM1P21375 501 aaKnown RBP2.41□□□□□ -2.02
RPF2YKR081C RRT12P25381 491 aa2.41□□□□□ -2.02
RPF2YKR081C GDS1P41913 522 aa2.41□□□□□ -2.02
RPF2YKR081C COX16P47081 118 aa2.41□□□□□ -2.02
RPF2YKR081C MPP10P47083 593 aaKnown RBP2.41□□□□□ -2.02
RPF2YKR081C VPS20Q04272 221 aa2.41□□□□□ -2.02
RPF2YKR081C PGC1Q08959 321 aa2.41□□□□□ -2.02
RPF2YKR081C YPR064WQ12492 139 aa2.41□□□□□ -2.02
RPF2YKR081C GAL7P08431 366 aa2.4□□□□□ -2.03
RPF2YKR081C CLB6P32943 380 aa2.4□□□□□ -2.03
RPF2YKR081C BIO4P53630 237 aa2.4□□□□□ -2.03
RPF2YKR081C MRS2Q01926 470 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms