RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	VPH2	P32341	215 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	YBR062C	P38239	180 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	YIL059C	P40520	121 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	ASG7	P46993	209 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	COX16	P47081	118 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	YGR266W	P53326	701 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	SEC13	Q04491	297 aa	Known RBP	2.27	□□□□□ -2.05
TPK3	YKL166C	YPL264C	Q08980	353 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	SIA1	Q12212	622 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	YPS3	Q12303	508 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	IZH4	Q99393	312 aa		2.27	□□□□□ -2.05
TPK3	YKL166C	IFM1	P25038	676 aa		2.26	□□□□□ -2.05
TPK3	YKL166C	RPL16B	P26785	198 aa	Known RBP	2.26	□□□□□ -2.05
TPK3	YKL166C	IME2	P32581	645 aa		2.26	□□□□□ -2.05
TPK3	YKL166C	IMP3	P32899	183 aa	Predicted RBP	2.26	□□□□□ -2.05
TPK3	YKL166C	GDS1	P41913	522 aa		2.26	□□□□□ -2.05
TPK3	YKL166C	SWC4	P53201	476 aa		2.26	□□□□□ -2.05
TPK3	YKL166C	RFM1	Q12192	310 aa		2.26	□□□□□ -2.05
TPK3	YKL166C	RAD7	P06779	565 aa		2.25	□□□□□ -2.05
TPK3	YKL166C	ARO4	P32449	370 aa	Known RBP	2.25	□□□□□ -2.05
TPK3	YKL166C	RPC25	P35718	212 aa		2.25	□□□□□ -2.05
TPK3	YKL166C	TPO5	P36029	618 aa		2.25	□□□□□ -2.05
TPK3	YKL166C	SWD2	P36104	329 aa	Predicted RBP	2.25	□□□□□ -2.05
TPK3	YKL166C	AIM29	P36154	155 aa		2.25	□□□□□ -2.05
TPK3	YKL166C	VAB2	P40003	282 aa		2.25	□□□□□ -2.05
TPK3	YKL166C	EDC2	P40023	145 aa	Predicted RBP	2.25	□□□□□ -2.05
TPK3	YKL166C	SPO73	P40031	143 aa		2.25	□□□□□ -2.05
TPK3	YKL166C	MPP10	P47083	593 aa	Known RBP	2.25	□□□□□ -2.05
TPK3	YKL166C	GTO3	Q04806	366 aa		2.25	□□□□□ -2.05
TPK3	YKL166C	RPS23A	P0CX29	145 aa	Known RBP	2.24	□□□□□ -2.05
TPK3	YKL166C	RPS23B	P0CX30	145 aa		2.24	□□□□□ -2.05
TPK3	YKL166C	HPR1	P17629	752 aa	Known RBP	2.24	□□□□□ -2.05
TPK3	YKL166C	CDC13	P32797	924 aa	Known RBP	2.24	□□□□□ -2.05
TPK3	YKL166C	MRPL6	P32904	214 aa		2.24	□□□□□ -2.05
TPK3	YKL166C	RPN14	P53196	417 aa		2.24	□□□□□ -2.05
TPK3	YKL166C	SPO19	Q03029	223 aa		2.24	□□□□□ -2.05
TPK3	YKL166C	ECM18	Q04623	453 aa		2.24	□□□□□ -2.05
TPK3	YKL166C	YDR222W	Q04925	415 aa		2.24	□□□□□ -2.05
TPK3	YKL166C	SGT2	Q12118	346 aa	Known RBP	2.24	□□□□□ -2.05
TPK3	YKL166C	YAL063C-A	Q3E791	96 aa		2.24	□□□□□ -2.05
TPK3	YKL166C	ATP6	P00854	259 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	CDC42	P19073	191 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	GPI12	P23797	304 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	YCR025C	P25352	136 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	GCG1	P32656	232 aa	Known RBP	2.23	□□□□□ -2.05
TPK3	YKL166C	CSE1	P33307	960 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	ECM14	P38836	430 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	VPS45	P38932	577 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	YFL064C	P43540	174 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	YFR045W	P43617	309 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	GCD14	P46959	383 aa	Predicted RBP	2.23	□□□□□ -2.05
TPK3	YKL166C	UFD1	P53044	361 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	LIF1	P53150	421 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	YNL040W	P53960	456 aa	Predicted RBP	2.23	□□□□□ -2.05
TPK3	YKL166C	PEX30	Q06169	523 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	TAZ1	Q06510	381 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	YPL278C	Q08990	100 aa		2.23	□□□□□ -2.05
TPK3	YKL166C	UGA1	P17649	471 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	DBP3	P20447	523 aa	Known RBP	2.22	□□□□□ -2.05
TPK3	YKL166C	YKL063C	P35725	167 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	RPC37	P36121	282 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	MRPL40	P36534	297 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	MBA1	P38300	278 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	RRF1	P38771	230 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	GTO1	P48239	356 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	YPT32	P51996	222 aa	Known RBP	2.22	□□□□□ -2.05
TPK3	YKL166C	PNC1	P53184	216 aa	Known RBP	2.22	□□□□□ -2.05
TPK3	YKL166C	ARP5	P53946	755 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	YPL077C	Q02831	240 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	CSI1	Q04368	295 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	ERV41	Q04651	352 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	ARC18	Q05933	178 aa	Known RBP	2.22	□□□□□ -2.05
TPK3	YKL166C	DXO1	Q06349	442 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	RRP42	Q12277	265 aa	Predicted RBP	2.22	□□□□□ -2.05
TPK3	YKL166C	YPR064W	Q12492	139 aa		2.22	□□□□□ -2.05
TPK3	YKL166C	DAL5	P15365	543 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	DAL81	P21657	970 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	PRE7	P23724	241 aa	Known RBP	2.21	□□□□□ -2.06
TPK3	YKL166C	MRPL3	P36516	390 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	MED8	P38304	223 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	YHL044W	P38727	235 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	SMC2	P38989	1170 aa	Known RBP	2.21	□□□□□ -2.06
TPK3	YKL166C	AGP3	P43548	558 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	BCP1	Q06338	283 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	ASR1	Q06834	288 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	YPR063C	Q12160	140 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	IES3	Q12345	250 aa		2.21	□□□□□ -2.06
TPK3	YKL166C	AEP1	P32493	518 aa		2.2	□□□□□ -2.06
TPK3	YKL166C	HIS2	P38635	335 aa		2.2	□□□□□ -2.06
TPK3	YKL166C	SHQ1	P40486	507 aa	Predicted RBP	2.2	□□□□□ -2.06
TPK3	YKL166C	YIL012W	P40551	113 aa		2.2	□□□□□ -2.06
TPK3	YKL166C	PRP24	P49960	444 aa	Known RBP	2.2	□□□□□ -2.06
TPK3	YKL166C	KEL2	P50090	882 aa		2.2	□□□□□ -2.06
TPK3	YKL166C	YGL185C	P53100	379 aa		2.2	□□□□□ -2.06
TPK3	YKL166C	YPL113C	Q02961	396 aa		2.2	□□□□□ -2.06
TPK3	YKL166C	TFS1	P14306	219 aa		2.19	□□□□□ -2.06
TPK3	YKL166C	MEK1	P24719	497 aa	Predicted RBP	2.19	□□□□□ -2.06
TPK3	YKL166C	CSM1	P25651	190 aa		2.19	□□□□□ -2.06
TPK3	YKL166C	IMP1	P28627	190 aa		2.19	□□□□□ -2.06
TPK3	YKL166C	SPT4	P32914	102 aa	Predicted RBP	2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 78.8 ms