RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C URK1P27515 501 aa3.02□□□□□ -1.93
YIR040CYIR040C PEX4P29340 183 aa3.02□□□□□ -1.93
YIR040CYIR040C HOM6P31116 359 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C AEP1P32493 518 aa3.02□□□□□ -1.93
YIR040CYIR040C ECM25P32525 599 aa3.02□□□□□ -1.93
YIR040CYIR040C REC114P32841 428 aa3.02□□□□□ -1.93
YIR040CYIR040C SKT5P34226 696 aa3.02□□□□□ -1.93
YIR040CYIR040C CMC1P36064 111 aa3.02□□□□□ -1.93
YIR040CYIR040C TCD2P36101 447 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C ARA1P38115 344 aa3.02□□□□□ -1.93
YIR040CYIR040C MIC12P38341 106 aa3.02□□□□□ -1.93
YIR040CYIR040C SRP68P38687 599 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C ARN1P38731 627 aa3.02□□□□□ -1.93
YIR040CYIR040C BIG1P38813 335 aa3.02□□□□□ -1.93
YIR040CYIR040C CRG1P38892 291 aaRIP-Chip data3.02□□□□□ -1.93not detected
YIR040CYIR040C YHR210CP38893 341 aa3.02□□□□□ -1.93
YIR040CYIR040C ALP1P38971 573 aa3.02□□□□□ -1.93
YIR040CYIR040C OXA1P39952 402 aa3.02□□□□□ -1.93
YIR040CYIR040C ERG28P40030 148 aa3.02□□□□□ -1.93
YIR040CYIR040C CDC40P40968 455 aaPredicted RBP3.02□□□□□ -1.93
YIR040CYIR040C YGR210CP42942 411 aa3.02□□□□□ -1.93
YIR040CYIR040C SCD6P45978 349 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
YIR040CYIR040C PMT4P46971 762 aa3.02□□□□□ -1.93
YIR040CYIR040C DPB11P47027 764 aaPredicted RBP3.02□□□□□ -1.93
YIR040CYIR040C YJR079WP47126 109 aa3.02□□□□□ -1.93
YIR040CYIR040C RIB4P50861 169 aaPredicted RBP3.02□□□□□ -1.93
YIR040CYIR040C COG7P53195 279 aa3.02□□□□□ -1.93
YIR040CYIR040C SPP2Q02521 185 aa3.02□□□□□ -1.93
YIR040CYIR040C CTL1Q03220 320 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C RIM13Q03792 727 aa3.02□□□□□ -1.93
YIR040CYIR040C YDR387CQ04162 555 aa3.02□□□□□ -1.93
YIR040CYIR040C ADH6Q04894 360 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C SSK1Q07084 712 aa3.02□□□□□ -1.93
YIR040CYIR040C SLD7Q08457 257 aa3.02□□□□□ -1.93
YIR040CYIR040C FSF1Q12029 327 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C FCF2Q12035 217 aaPredicted RBP3.02□□□□□ -1.93
YIR040CYIR040C YDR018CQ12185 396 aa3.02□□□□□ -1.93
YIR040CYIR040C YCT1Q12235 531 aa3.02□□□□□ -1.93
YIR040CYIR040C NDJ1Q12366 352 aa3.02□□□□□ -1.93
YIR040CYIR040C YDL199CQ12407 687 aa3.02□□□□□ -1.93
YIR040CYIR040C YJR112W-AQ3E743 109 aa3.02□□□□□ -1.93
YIR040CYIR040C YLR099W-AQ3E798 87 aa3.02□□□□□ -1.93
YIR040CYIR040C MEX67Q99257 599 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C FSH3Q99369 266 aa3.02□□□□□ -1.93
YIR040CYIR040C SSK2P53599 1579 aa3.02□□□□□ -1.93
YIR040CYIR040C NUP170P38181 1502 aa3.02□□□□□ -1.93
YIR040CYIR040C BCY1P07278 416 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C MRP13P12686 339 aa3.01□□□□□ -1.93
YIR040CYIR040C POX1P13711 748 aa3.01□□□□□ -1.93
YIR040CYIR040C YMR31P19955 123 aa3.01□□□□□ -1.93
YIR040CYIR040C MIR1P23641 311 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C YCR023CP25351 611 aa3.01□□□□□ -1.93
YIR040CYIR040C ILV6P25605 309 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C INO2P26798 304 aa3.01□□□□□ -1.93
YIR040CYIR040C MSK1P32048 576 aa3.01□□□□□ -1.93
YIR040CYIR040C SAC1P32368 623 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C SCM4P32564 187 aa3.01□□□□□ -1.93
YIR040CYIR040C YEF1P32622 495 aa3.01□□□□□ -1.93
YIR040CYIR040C RAD23P32628 398 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C MTC7P32633 139 aa3.01□□□□□ -1.93
YIR040CYIR040C SGE1P33335 543 aa3.01□□□□□ -1.93
YIR040CYIR040C COS9P36034 407 aa3.01□□□□□ -1.93
YIR040CYIR040C CBP4P37267 147 aa3.01□□□□□ -1.93
YIR040CYIR040C PRS4P38063 326 aaPredicted RBP3.01□□□□□ -1.93
YIR040CYIR040C ETR1P38071 380 aa3.01□□□□□ -1.93
YIR040CYIR040C SLM4P38247 162 aa3.01□□□□□ -1.93
YIR040CYIR040C YHR122WP38829 231 aa3.01□□□□□ -1.93
YIR040CYIR040C IKI1P38874 309 aa3.01□□□□□ -1.93
YIR040CYIR040C MLH1P38920 769 aa3.01□□□□□ -1.93
YIR040CYIR040C YEL057CP39983 233 aa3.01□□□□□ -1.93
YIR040CYIR040C BTT1P40314 149 aaPredicted RBP3.01□□□□□ -1.93
YIR040CYIR040C MOB1P40484 314 aa3.01□□□□□ -1.93
YIR040CYIR040C FIS1P40515 155 aa3.01□□□□□ -1.93
YIR040CYIR040C CIN2P46670 268 aa3.01□□□□□ -1.93
YIR040CYIR040C YJL043WP47053 257 aa3.01□□□□□ -1.93
YIR040CYIR040C LYS20P48570 428 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C COS10P52924 374 aa3.01□□□□□ -1.93
YIR040CYIR040C COS12P53053 380 aa3.01□□□□□ -1.93
YIR040CYIR040C RRT6P53117 311 aaPredicted RBP3.01□□□□□ -1.93
YIR040CYIR040C TRM112P53738 135 aaPredicted RBP3.01□□□□□ -1.93
YIR040CYIR040C YNR066CP53752 436 aa3.01□□□□□ -1.93
YIR040CYIR040C HCH1P53834 153 aa3.01□□□□□ -1.93
YIR040CYIR040C ERG13P54839 491 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C TPS1Q00764 495 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C YPL014WQ02606 381 aa3.01□□□□□ -1.93
YIR040CYIR040C ELP3Q02908 557 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C TDA1Q03533 586 aa3.01□□□□□ -1.93
YIR040CYIR040C GPI17Q04080 534 aa3.01□□□□□ -1.93
YIR040CYIR040C YMR130WQ04223 302 aa3.01□□□□□ -1.93
YIR040CYIR040C GMC1Q04399 608 aa3.01□□□□□ -1.93
YIR040CYIR040C SMA2Q04658 369 aa3.01□□□□□ -1.93
YIR040CYIR040C DPP1Q05521 289 aa3.01□□□□□ -1.93
YIR040CYIR040C MRPL35Q06678 367 aa3.01□□□□□ -1.93
YIR040CYIR040C BER1Q06688 274 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C MRX9Q07349 420 aaKnown RBP3.01□□□□□ -1.93
YIR040CYIR040C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
YIR040CYIR040C ATX2Q12067 313 aa3.01□□□□□ -1.93
YIR040CYIR040C YLL056CQ12177 298 aa3.01□□□□□ -1.93
YIR040CYIR040C YLR046CQ12253 270 aa3.01□□□□□ -1.93
YIR040CYIR040C TPO4Q12256 659 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms