RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YMR085WP0CF18 432 aa3.34□□□□□ -1.87
PDX1YGR193C DDI2P0CH63 225 aa3.34□□□□□ -1.87
PDX1YGR193C DDI3P0CH64 225 aa3.34□□□□□ -1.87
PDX1YGR193C MRP2P10663 115 aaPredicted RBP3.34□□□□□ -1.87
PDX1YGR193C ERD2P18414 219 aa3.34□□□□□ -1.87
PDX1YGR193C SAM2P19358 384 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C SEC59P20048 519 aa3.34□□□□□ -1.87
PDX1YGR193C SEC22P22214 214 aa3.34□□□□□ -1.87
PDX1YGR193C CLB2P24869 491 aa3.34□□□□□ -1.87
PDX1YGR193C MGT1P26188 188 aa3.34□□□□□ -1.87
PDX1YGR193C YIM1P28625 365 aa3.34□□□□□ -1.87
PDX1YGR193C OCH1P31755 480 aa3.34□□□□□ -1.87
PDX1YGR193C RIM1P32445 135 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C CYS4P32582 507 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C SRB5P32585 307 aa3.34□□□□□ -1.87
PDX1YGR193C HIS7P33734 552 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C SKG1P36169 355 aa3.34□□□□□ -1.87
PDX1YGR193C APL3P38065 1025 aa3.34□□□□□ -1.87
PDX1YGR193C ARA1P38115 344 aa3.34□□□□□ -1.87
PDX1YGR193C HIS2P38635 335 aa3.34□□□□□ -1.87
PDX1YGR193C MIP6P38760 659 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C YHR127WP38833 243 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C TDA11P38854 504 aa3.34□□□□□ -1.87
PDX1YGR193C CHL4P38907 458 aa3.34□□□□□ -1.87
PDX1YGR193C EXO1P39875 702 aa3.34□□□□□ -1.87
PDX1YGR193C FMP52P40008 231 aa3.34□□□□□ -1.87
PDX1YGR193C RRG9P40156 214 aa3.34□□□□□ -1.87
PDX1YGR193C PRE6P40303 254 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C BMT5P40493 336 aa3.34□□□□□ -1.87
PDX1YGR193C GTT1P40582 234 aa3.34□□□□□ -1.87
PDX1YGR193C PFA3P42836 336 aa3.34□□□□□ -1.87
PDX1YGR193C SNG1P46950 547 aa3.34□□□□□ -1.87
PDX1YGR193C YJR011CP47086 261 aaPredicted RBP3.34□□□□□ -1.87
PDX1YGR193C BIR1P47134 954 aa3.34□□□□□ -1.87
PDX1YGR193C YDL186WP48568 277 aa3.34□□□□□ -1.87
PDX1YGR193C MGA1P53050 456 aa3.34□□□□□ -1.87
PDX1YGR193C NIF3P53081 288 aa3.34□□□□□ -1.87
PDX1YGR193C BOR1P53838 576 aa3.34□□□□□ -1.87
PDX1YGR193C ERG13P54839 491 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C YPL108WQ02872 168 aaPredicted RBP3.34□□□□□ -1.87
PDX1YGR193C DIG1Q03063 452 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C PFA5Q03289 374 aa3.34□□□□□ -1.87
PDX1YGR193C PAL1Q05518 499 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C YLR407WQ06070 228 aa3.34□□□□□ -1.87
PDX1YGR193C NKP2Q06162 153 aa3.34□□□□□ -1.87
PDX1YGR193C ASR1Q06834 288 aa3.34□□□□□ -1.87
PDX1YGR193C MRX9Q07349 420 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C HNT3Q08702 217 aa3.34□□□□□ -1.87
PDX1YGR193C YDR018CQ12185 396 aa3.34□□□□□ -1.87
PDX1YGR193C PST2Q12335 198 aaKnown RBP3.34□□□□□ -1.87
PDX1YGR193C YBR182C-AQ8TGU6 64 aa3.34□□□□□ -1.87
PDX1YGR193C FSH3Q99369 266 aa3.34□□□□□ -1.87
PDX1YGR193C SIR4P11978 1358 aa3.34□□□□□ -1.88
PDX1YGR193C ADE6P38972 1358 aaKnown RBP3.34□□□□□ -1.88
PDX1YGR193C RPN13O13563 156 aa3.33□□□□□ -1.88
PDX1YGR193C YLR415CO13578 112 aa3.33□□□□□ -1.88
PDX1YGR193C CMD1P06787 147 aaKnown RBP3.33□□□□□ -1.88
PDX1YGR193C CUP2P15315 225 aa3.33□□□□□ -1.88
PDX1YGR193C RPB8P20436 146 aa3.33□□□□□ -1.88
PDX1YGR193C FUB1P25659 250 aa3.33□□□□□ -1.88
PDX1YGR193C PRP45P28004 379 aaPredicted RBP3.33□□□□□ -1.88
PDX1YGR193C DEG1P31115 442 aaKnown RBP3.33□□□□□ -1.88
PDX1YGR193C HOM6P31116 359 aaKnown RBP3.33□□□□□ -1.88
PDX1YGR193C AEP1P32493 518 aa3.33□□□□□ -1.88
PDX1YGR193C YEF1P32622 495 aa3.33□□□□□ -1.88
PDX1YGR193C SIP2P34164 415 aaKnown RBP3.33□□□□□ -1.88
PDX1YGR193C JEN1P36035 616 aa3.33□□□□□ -1.88
PDX1YGR193C ASC1P38011 319 aaKnown RBP3.33□□□□□ -1.88
PDX1YGR193C RCK1P38622 512 aa3.33□□□□□ -1.88
PDX1YGR193C PCF11P39081 626 aaPredicted RBP3.33□□□□□ -1.88
PDX1YGR193C PHO90P39535 881 aa3.33□□□□□ -1.88
PDX1YGR193C ERV46P39727 415 aa3.33□□□□□ -1.88
PDX1YGR193C ARG2P40360 574 aa3.33□□□□□ -1.88
PDX1YGR193C SER33P40510 469 aa3.33□□□□□ -1.88
PDX1YGR193C GSM1P42950 618 aa3.33□□□□□ -1.88
PDX1YGR193C IKS1P47042 667 aa3.33□□□□□ -1.88
PDX1YGR193C MIC26P50087 233 aa3.33□□□□□ -1.88
PDX1YGR193C GTR2P53290 341 aa3.33□□□□□ -1.88
PDX1YGR193C YNR062CP53748 327 aa3.33□□□□□ -1.88
PDX1YGR193C YNL040WP53960 456 aaPredicted RBP3.33□□□□□ -1.88
PDX1YGR193C MAK3Q03503 176 aa3.33□□□□□ -1.88
PDX1YGR193C CTK1Q03957 528 aaKnown RBP3.33□□□□□ -1.88
PDX1YGR193C MRPL51Q06090 140 aaPredicted RBP3.33□□□□□ -1.88
PDX1YGR193C ATG39Q06159 398 aa3.33□□□□□ -1.88
PDX1YGR193C NOC4Q06512 552 aaPredicted RBP3.33□□□□□ -1.88
PDX1YGR193C BER1Q06688 274 aaKnown RBP3.33□□□□□ -1.88
PDX1YGR193C FCF2Q12035 217 aaPredicted RBP3.33□□□□□ -1.88
PDX1YGR193C SIA1Q12212 622 aa3.33□□□□□ -1.88
PDX1YGR193C TPO4Q12256 659 aa3.33□□□□□ -1.88
PDX1YGR193C YPR1Q12458 312 aa3.33□□□□□ -1.88
PDX1YGR193C RMD5Q12508 421 aa3.33□□□□□ -1.88
PDX1YGR193C FOL3Q12676 427 aaPredicted RBP3.33□□□□□ -1.88
PDX1YGR193C SAS5Q99314 248 aa3.33□□□□□ -1.88
PDX1YGR193C IZH4Q99393 312 aa3.33□□□□□ -1.88
PDX1YGR193C SPP41P38904 1435 aa3.33□□□□□ -1.88
PDX1YGR193C SAL1D6W196 494 aa3.32□□□□□ -1.88
PDX1YGR193C YBR085C-AO43137 85 aa3.32□□□□□ -1.88
PDX1YGR193C TPI1P00942 248 aaKnown RBP3.32□□□□□ -1.88
PDX1YGR193C MES1P00958 751 aaKnown RBP3.32□□□□□ -1.88
PDX1YGR193C HEM15P16622 393 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms