RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	AIM23	P47015	356 aa		2.37	□□□□□ -2.03
TFB1	YDR311W	CRH1	P53301	507 aa		2.37	□□□□□ -2.03
TFB1	YDR311W	SLT2	Q00772	484 aa		2.37	□□□□□ -2.03
TFB1	YDR311W	SEC13	Q04491	297 aa	Known RBP	2.37	□□□□□ -2.03
TFB1	YDR311W	SPO77	Q06134	477 aa		2.37	□□□□□ -2.03
TFB1	YDR311W	SFH1	Q06168	426 aa		2.37	□□□□□ -2.03
TFB1	YDR311W	YPR064W	Q12492	139 aa		2.37	□□□□□ -2.03
TFB1	YDR311W	YOS9	Q99220	542 aa		2.37	□□□□□ -2.03
TFB1	YDR311W	THP2	O13539	261 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	PHO2	P07269	559 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	FUS3	P16892	353 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	COQ1	P18900	473 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	RIB1	P38066	345 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	YBR241C	P38142	488 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	MRX3	P38172	270 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	PRS2	P38620	318 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	RCK1	P38622	512 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	RTC3	P38804	111 aa	Predicted RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	CHL4	P38907	458 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	SMB1	P40018	196 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	YER034W	P40022	185 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	YIA6	P40556	373 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	RPL10	P41805	221 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	ATG18	P43601	500 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	VEL1	P53058	206 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	VAC7	P53950	1165 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	SNZ1	Q03148	297 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	DCR2	Q05924	578 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	PEX30	Q06169	523 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	MIM1	Q08176	113 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	YOR376W	Q08900	122 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	RSA1	Q08932	381 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	RRP42	Q12277	265 aa	Predicted RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	NHP6B	P11633	99 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	ZRC1	P20107	442 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	RPO26	P20435	155 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	DEP1	P31385	405 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	RME1	P32338	300 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	SDH3	P33421	198 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	SDS24	P38314	527 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	MIC12	P38341	106 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	KRE9	P39005	276 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	YNL208W	P40159	199 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	HOC1	P47124	396 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	YPT32	P51996	222 aa	Known RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	TPN1	P53099	579 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	MAL13	P53338	473 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	KRE28	Q04431	385 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	PBA1	Q05778	276 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	FAR10	Q06001	478 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	YLR446W	Q06204	433 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	CLP1	Q08685	445 aa	Predicted RBP	2.36	□□□□□ -2.03
TFB1	YDR311W	ERV2	Q12284	196 aa		2.36	□□□□□ -2.03
TFB1	YDR311W	CBS2	P14905	389 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	RPB5	P20434	215 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	APA2	P22108	325 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	MRPL20	P22354	195 aa	Predicted RBP	2.35	□□□□□ -2.03
TFB1	YDR311W	QRI5	P32344	111 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	MAL32	P38158	584 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	PAN6	P40459	309 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	JHD2	P47156	728 aa	Predicted RBP	2.35	□□□□□ -2.03
TFB1	YDR311W	MAL12	P53341	584 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	ELP3	Q02908	557 aa	Known RBP	2.35	□□□□□ -2.03
TFB1	YDR311W	EBS1	Q03466	884 aa	Known RBP	2.35	□□□□□ -2.03
TFB1	YDR311W	FSH2	Q05015	223 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	LOA1	Q06508	300 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	CTR3	Q06686	241 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	PLP2	Q12017	286 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	TIP41	Q12199	356 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	YOR114W	Q12219	294 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	SFM1	Q12314	213 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	IZH2	Q12442	317 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	MHP1	P43638	1398 aa		2.35	□□□□□ -2.03
TFB1	YDR311W	URA10	P30402	227 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	VMA6	P32366	345 aa	Known RBP	2.34	□□□□□ -2.03
TFB1	YDR311W	PRP18	P33411	251 aa	Predicted RBP	2.34	□□□□□ -2.03
TFB1	YDR311W	CBT1	P36038	271 aa	Predicted RBP	2.34	□□□□□ -2.03
TFB1	YDR311W	RFS1	P38234	210 aa	Known RBP	2.34	□□□□□ -2.03
TFB1	YDR311W	PTH1	P38876	190 aa	Known RBP	2.34	□□□□□ -2.03
TFB1	YDR311W	SER33	P40510	469 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	YFR057W	P43625	151 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	ASG7	P46993	209 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	YJR012C	P47087	207 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	IBA57	P47158	497 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	YPS5	P53057	165 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	CLD1	P53264	445 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	YNL095C	P53932	642 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	PRP38	Q00723	242 aa	Predicted RBP	2.34	□□□□□ -2.03
TFB1	YDR311W	YDR209C	Q03480	137 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	BNA7	Q04066	261 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	GMC1	Q04399	608 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	DPP1	Q05521	289 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	NAG1	Q8TGN9	163 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	BI3	Q9ZZW7	517 aa		2.34	□□□□□ -2.03
TFB1	YDR311W	RPS3	P05750	240 aa	Known RBP	2.34	□□□□□ -2.04
TFB1	YDR311W	CDC33	P07260	213 aa	Known RBP	2.34	□□□□□ -2.04
TFB1	YDR311W	PET494	P07390	489 aa	Predicted RBP	2.34	□□□□□ -2.04
TFB1	YDR311W	RPL24B	P24000	155 aa	Known RBP	2.34	□□□□□ -2.04
TFB1	YDR311W	GPX1	P36014	167 aa		2.34	□□□□□ -2.04
TFB1	YDR311W	LSM12	P38828	187 aa	Known RBP	2.34	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms