RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	YPS1	P32329	569 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	YKL162C	P36052	402 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	YBR062C	P38239	180 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	PES4	P39684	611 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	SSO2	P39926	295 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	YFL040W	P43562	540 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	VPS20	Q04272	221 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	YPL278C	Q08990	100 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	MRX4	Q12467	430 aa		2.27	□□□□□ -2.05
ATP16	YDL004W	PET18	P25362	215 aa		2.26	□□□□□ -2.05
ATP16	YDL004W	GPX1	P36014	167 aa		2.26	□□□□□ -2.05
ATP16	YDL004W	YKR032W	P36127	104 aa		2.26	□□□□□ -2.05
ATP16	YDL004W	YIL012W	P40551	113 aa		2.26	□□□□□ -2.05
ATP16	YDL004W	CLP1	Q08685	445 aa	Predicted RBP	2.26	□□□□□ -2.05
ATP16	YDL004W	SAM4	Q08985	325 aa	Known RBP	2.26	□□□□□ -2.05
ATP16	YDL004W	MDY2	Q12285	212 aa		2.26	□□□□□ -2.05
ATP16	YDL004W	UTP23	Q12339	254 aa	Known RBP	2.26	□□□□□ -2.05
ATP16	YDL004W	LAG2	Q92325	660 aa		2.26	□□□□□ -2.05
ATP16	YDL004W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	not detected
ATP16	YDL004W	GCD2	P12754	651 aa	Predicted RBP	2.25	□□□□□ -2.05
ATP16	YDL004W	MRPL6	P32904	214 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	RPS0A	P32905	252 aa	Known RBP	2.25	□□□□□ -2.05
ATP16	YDL004W	AIM29	P36154	155 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	YHR035W	P38769	630 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	YER084W	P40057	128 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	SCC4	P40090	624 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	AIM20	P40451	204 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	UTP25	P40498	721 aa	Known RBP	2.25	□□□□□ -2.05
ATP16	YDL004W	INA22	P40576	216 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	UFD1	P53044	361 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	YLR297W	Q05899	129 aa		2.25	□□□□□ -2.05
ATP16	YDL004W	ARC18	Q05933	178 aa	Known RBP	2.25	□□□□□ -2.05
ATP16	YDL004W	TDH2	P00358	332 aa	Known RBP	2.24	□□□□□ -2.05
ATP16	YDL004W	CDC13	P32797	924 aa	Known RBP	2.24	□□□□□ -2.05
ATP16	YDL004W	RRF1	P38771	230 aa		2.24	□□□□□ -2.05
ATP16	YDL004W	END3	P39013	349 aa		2.24	□□□□□ -2.05
ATP16	YDL004W	ABZ2	Q03266	374 aa		2.24	□□□□□ -2.05
ATP16	YDL004W	PBP4	Q07362	185 aa	Known RBP	2.24	□□□□□ -2.05
ATP16	YDL004W	DCP1	Q12517	231 aa	Predicted RBP	2.24	□□□□□ -2.05
ATP16	YDL004W	YAL063C-A	Q3E791	96 aa		2.24	□□□□□ -2.05
ATP16	YDL004W	YAK1	P14680	807 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	YCR025C	P25352	136 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	YPC1	P38298	316 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	SWC5	P38326	303 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	MNN9	P39107	395 aa	Known RBP	2.23	□□□□□ -2.05
ATP16	YDL004W	OKP1	P53298	406 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	YGR266W	P53326	701 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	ARP5	P53946	755 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	CAB5	Q03941	241 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	YMR111C	Q04461	462 aa	Predicted RBP	2.23	□□□□□ -2.05
ATP16	YDL004W	YLR446W	Q06204	433 aa		2.23	□□□□□ -2.05
ATP16	YDL004W	MSS116	P15424	664 aa	Known RBP	2.22	□□□□□ -2.05
ATP16	YDL004W	MCH2	P36032	473 aa		2.22	□□□□□ -2.05
ATP16	YDL004W	FET3	P38993	636 aa		2.22	□□□□□ -2.05
ATP16	YDL004W	YER188W	P40103	239 aa		2.22	□□□□□ -2.05
ATP16	YDL004W	PCL7	P40186	285 aa		2.22	□□□□□ -2.05
ATP16	YDL004W	CUR1	Q06469	252 aa		2.22	□□□□□ -2.05
ATP16	YDL004W	FEX1	Q08913	375 aa		2.22	□□□□□ -2.05
ATP16	YDL004W	FEX2	Q08991	375 aa		2.22	□□□□□ -2.05
ATP16	YDL004W	YPR1	Q12458	312 aa		2.22	□□□□□ -2.05
ATP16	YDL004W	YOL163W	P0CF20	169 aa		2.21	□□□□□ -2.06
ATP16	YDL004W	DAL80	P26343	269 aa		2.21	□□□□□ -2.06
ATP16	YDL004W	TPO5	P36029	618 aa		2.21	□□□□□ -2.06
ATP16	YDL004W	MED6	P38782	295 aa		2.21	□□□□□ -2.06
ATP16	YDL004W	LOC1	P43586	204 aa	Predicted RBP	2.21	□□□□□ -2.06
ATP16	YDL004W	RIB4	P50861	169 aa	Predicted RBP	2.21	□□□□□ -2.06
ATP16	YDL004W	VOA1	P53262	265 aa		2.21	□□□□□ -2.06
ATP16	YDL004W	RGM1	Q00453	211 aa		2.21	□□□□□ -2.06
ATP16	YDL004W	OSH6	Q02201	448 aa		2.21	□□□□□ -2.06
ATP16	YDL004W	SAR1	P20606	190 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	VPS1	P21576	704 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	RSA4	P25382	515 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	RPL16B	P26785	198 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	IMP1	P28627	190 aa		2.2	□□□□□ -2.06
ATP16	YDL004W	VPH2	P32341	215 aa		2.2	□□□□□ -2.06
ATP16	YDL004W	MRPL40	P36534	297 aa		2.2	□□□□□ -2.06
ATP16	YDL004W	YBL081W	P38180	368 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	YFL064C	P43540	174 aa		2.2	□□□□□ -2.06
ATP16	YDL004W	LOH1	P47055	219 aa		2.2	□□□□□ -2.06
ATP16	YDL004W	PRP24	P49960	444 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	DBP6	P53734	629 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	ERV25	P54837	211 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	CDD1	Q06549	142 aa		2.2	□□□□□ -2.06
ATP16	YDL004W	PAA1	Q12447	191 aa	Known RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	PFK27	Q12471	397 aa	Predicted RBP	2.2	□□□□□ -2.06
ATP16	YDL004W	YIL002W-A	Q3E7Z5	69 aa		2.2	□□□□□ -2.06
ATP16	YDL004W	CAR2	P07991	424 aa	Known RBP	2.19	□□□□□ -2.06
ATP16	YDL004W	DBP3	P20447	523 aa	Known RBP	2.19	□□□□□ -2.06
ATP16	YDL004W	EBP2	P36049	427 aa	Known RBP	2.19	□□□□□ -2.06
ATP16	YDL004W	CDC40	P40968	455 aa	Predicted RBP	2.19	□□□□□ -2.06
ATP16	YDL004W	SYS1	P41544	203 aa		2.19	□□□□□ -2.06
ATP16	YDL004W	GPI8	P49018	411 aa		2.19	□□□□□ -2.06
ATP16	YDL004W	RRG8	Q06109	277 aa		2.19	□□□□□ -2.06
ATP16	YDL004W	VAC14	Q06708	880 aa		2.19	□□□□□ -2.06
ATP16	YDL004W	IZH4	Q99393	312 aa		2.19	□□□□□ -2.06
ATP16	YDL004W	IFM1	P25038	676 aa		2.18	□□□□□ -2.06
ATP16	YDL004W	IMP3	P32899	183 aa	Predicted RBP	2.18	□□□□□ -2.06
ATP16	YDL004W	MRPL3	P36516	390 aa		2.18	□□□□□ -2.06
ATP16	YDL004W	VAB2	P40003	282 aa		2.18	□□□□□ -2.06
ATP16	YDL004W	UBC13	P52490	153 aa		2.18	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms