RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 NLRP7Q8WX94 980 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 MAP4K1Q92918 833 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 ZNF668Q96K58 619 aaPredicted RBP12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 KXD1Q9BQD3 176 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 MXRA8Q9BRK3 442 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 IER2Q9BTL4 223 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 NDRG2Q9UN36 371 aaKnown RBP12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 CEP131Q9UPN4 1083 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 MYH6P13533 1939 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 IGKV6D-21A0A0A0MT36 114 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 ERICH2A1L162 156 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 DDX39AO00148 427 aaKnown RBP12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 MAN2B1O00754 1011 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 HRO43593 1189 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 OFD1O75665 1012 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 CXCL12P48061 93 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 RBM25P49756 843 aaKnown RBP12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 SF3A2Q15428 464 aaKnown RBP12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 SEC23AQ15436 765 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 ABHD15Q6UXT9 468 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 CCDC60Q8IWA6 550 aaPredicted RBP12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 ZCCHC14Q8WYQ9 949 aaKnown RBP12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 FGF13Q92913 245 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 PGBD4Q96DM1 585 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 TMEM175Q9BSA9 504 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 LSM14BQ9BX40 385 aaKnown RBP12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 CHRDQ9H2X0 955 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 HEBP1Q9NRV9 189 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 KANSL3Q9P2N6 904 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 PCDHA6Q9UN73 950 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 PCDHA8Q9Y5H6 950 aa12.47□□□□□ -0.41
PTP4A1-207ENST00000639568 TAF4O00268 1085 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 NRP1O14786 923 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 TGM5O43548 720 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 PAPLNO95428 1278 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 C1RP00736 705 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 RAB27AP51159 221 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 ITGB3BPQ13352 177 aaPredicted RBP12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 FZD5Q13467 585 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 UBE2SQ16763 222 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 TAS1R1Q7RTX1 841 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 LRRC71Q8N4P6 559 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 FAM160A2Q8N612 972 aaPredicted RBP12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 HERC2P3Q9BVR0 1158 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 TRAIPQ9BWF2 469 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 RXFP1Q9HBX9 757 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 AGO4Q9HCK5 861 aaKnown RBP12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 TCEAL9Q9UHQ7 104 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 POLIQ9UNA4 740 aa12.46□□□□□ -0.41
PTP4A1-207ENST00000639568 ITPR1Q14643 2758 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 CHURC1-FNTBB4DL54 471 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 AXIN1O15169 862 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 CSDE1O75534 798 aaKnown RBP12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 ZMYND10O75800 440 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 DDHD2O94830 711 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 CCNE2O96020 404 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 ZNF806P0C7X5 589 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 SPINK2P20155 84 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 SFPQP23246 707 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 FNTBP49356 437 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 NOVA1P51513 510 aaKnown RBP12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 GPC3P51654 580 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 SRSF5Q13243 272 aaKnown RBP12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 CATIPQ7Z7H3 387 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 LONP2Q86WA8 852 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 GLYCTKQ8IVS8 523 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 GCOM2Q9BZD3 368 aaPredicted RBP12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 ARRDC1-AS1Q9H2J1 176 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 LMAN1LQ9HAT1 526 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 FAM105AQ9NUU6 356 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 PRG3Q9Y2Y8 225 aaPredicted RBP12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 MAST4O15021 2626 aa12.45□□□□□ -0.42
PTP4A1-207ENST00000639568 C2orf16Q68DN1 1984 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 MEIS3P2A8K0S8 358 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 IFIT3O14879 490 aaKnown RBP12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 B4GALT3O60512 393 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 NR1I2O75469 434 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 ATP4AP20648 1035 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 OR1G1P47890 313 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 NTHL1P78549 312 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 DSG1Q02413 1049 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 TRDNQ13061 729 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 CCDC6Q16204 474 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 CEP55Q53EZ4 464 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 LIN9Q5TKA1 542 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 HEATR6Q6AI08 1181 aaKnown RBP12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
PTP4A1-207ENST00000639568 MIA3Q5JRA6 1907 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 COL4A3Q01955 1670 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 EIF4E1BA6NMX2 242 aaKnown RBP12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 ZNF623O75123 536 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 XYLBO75191 536 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 POMCP01189 267 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 ZNF76P36508 570 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms