RNA–Protein interactions for RNA: ENST00000620323.1

USP12-203, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 3 BASIC

Gene USP12, Length 349 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-203ENST00000620323 OVCH1Q7RTY7 1134 aa4.24□□□□□ -1.73
USP12-203ENST00000620323 CPEB3Q8NE35 698 aaKnown RBP4.24□□□□□ -1.73
USP12-203ENST00000620323 ADAM2Q99965 735 aa4.24□□□□□ -1.73
USP12-203ENST00000620323 SPATA9Q9BWV2 254 aa4.24□□□□□ -1.73
USP12-203ENST00000620323 C1QTNF7Q9BXJ2 289 aa4.24□□□□□ -1.73
USP12-203ENST00000620323 ING3Q9NXR8 418 aa4.24□□□□□ -1.73
USP12-203ENST00000620323 R3HCC1Q9Y3T6 440 aaKnown RBP4.24□□□□□ -1.73
USP12-203ENST00000620323 SHROOM4Q9ULL8 1493 aa4.24□□□□□ -1.73
USP12-203ENST00000620323 MGST3O14880 152 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 DAPK3O43293 454 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 DNAJC6O75061 913 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 HIP1RO75146 1068 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 NAT1P18440 290 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 MPLP40238 635 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 RNASE9P60153 205 aaKnown RBP4.23□□□□□ -1.73
USP12-203ENST00000620323 IRF9Q00978 393 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 NHLH1Q02575 133 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 IQSEC1Q6DN90 963 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 SPATC1Q76KD6 591 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 ARHGEF25Q86VW2 580 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 SLC44A3Q8N4M1 653 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 MAML3Q96JK9 1138 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 CDC6Q99741 560 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 EPC1Q9H2F5 836 aa4.23□□□□□ -1.73
USP12-203ENST00000620323 PPP1R1BQ9UD71 204 aaPredicted RBP4.23□□□□□ -1.73
USP12-203ENST00000620323 CGB1A6NKQ9 187 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 MTSS1O43312 755 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 ESRRBO95718 433 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 ZBTB48P10074 688 aaPredicted RBP4.22□□□□□ -1.73
USP12-203ENST00000620323 ZSCAN20P17040 1043 aaPredicted RBP4.22□□□□□ -1.73
USP12-203ENST00000620323 BMPR1AP36894 532 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 GABREP78334 506 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 METTL24Q5JXM2 366 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 BMP8AQ7Z5Y6 402 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 XYLT1Q86Y38 959 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 MCF2L2Q86YR7 1114 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 SYT12Q8IV01 421 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 CAGE1Q8TC20 777 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 KIAA1586Q9HCI6 787 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 MAP3K2Q9Y2U5 619 aa4.22□□□□□ -1.73
USP12-203ENST00000620323 GAGE12BA1L429 117 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 GAGE12HA6NDE8 117 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 KLF4O43474 513 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 STK10O94804 968 aaKnown RBP4.21□□□□□ -1.74
USP12-203ENST00000620323 SPDEFO95238 335 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 ONECUT2O95948 504 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 CANXP27824 592 aaKnown RBP4.21□□□□□ -1.74
USP12-203ENST00000620323 CASRP41180 1078 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 RBL2Q08999 1139 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 MPP3Q13368 585 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 PDCD4Q53EL6 469 aaKnown RBP4.21□□□□□ -1.74
USP12-203ENST00000620323 PRAMEF9Q5VWM5 478 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 CC2D1AQ6P1N0 951 aaPredicted RBP4.21□□□□□ -1.74
USP12-203ENST00000620323 FAM83AQ86UY5 434 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 SH2D3CQ8N5H7 860 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 GLB1L3Q8NCI6 653 aaPredicted RBP4.21□□□□□ -1.74
USP12-203ENST00000620323 EXOC2Q96KP1 924 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 DCLRE1CQ96SD1 692 aaKnown RBP4.21□□□□□ -1.74
USP12-203ENST00000620323 PDCD2LQ9BRP1 358 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 DUSP26Q9BV47 211 aa4.21□□□□□ -1.74
USP12-203ENST00000620323 CELF4Q9BZC1 486 aaKnown RBP4.21□□□□□ -1.74
USP12-203ENST00000620323 UBA6A0AVT1 1052 aaPredicted RBP4.2□□□□□ -1.74
USP12-203ENST00000620323 KRT37O76014 449 aa4.2□□□□□ -1.74
USP12-203ENST00000620323 EGR2P11161 476 aaPredicted RBP4.2□□□□□ -1.74
USP12-203ENST00000620323 DDX6P26196 483 aaKnown RBP eCLIP4.2□□□□□ -1.74
USP12-203ENST00000620323 GTF2F1P35269 517 aaKnown RBP eCLIP4.2□□□□□ -1.742e-7■■■■■ 27.1
USP12-203ENST00000620323 SIM1P81133 766 aaPredicted RBP4.2□□□□□ -1.74
USP12-203ENST00000620323 NHLH2Q02577 135 aa4.2□□□□□ -1.74
USP12-203ENST00000620323 PLXDC1Q8IUK5 500 aa4.2□□□□□ -1.74
USP12-203ENST00000620323 UIMC1Q96RL1 719 aa4.2□□□□□ -1.74
USP12-203ENST00000620323 SLC52A2Q9HAB3 445 aa4.2□□□□□ -1.74
USP12-203ENST00000620323 ACSS2Q9NR19 701 aa4.2□□□□□ -1.74
USP12-203ENST00000620323 SEMA4GQ9NTN9 838 aa4.2□□□□□ -1.74
USP12-203ENST00000620323 DVL2O14641 736 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 EFCAB14O75071 495 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 ITGAMP11215 1152 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 FNTBP49356 437 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 SRSF4Q08170 494 aaKnown RBP4.19□□□□□ -1.74
USP12-203ENST00000620323 MYBPC3Q14896 1274 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 ABHD17BQ5VST6 288 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 ABHD17CQ6PCB6 329 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 GRASPQ7Z6J2 395 aaPredicted RBP4.19□□□□□ -1.74
USP12-203ENST00000620323 NOP9Q86U38 636 aaKnown RBP4.19□□□□□ -1.74
USP12-203ENST00000620323 CKAP2LQ8IYA6 745 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 PIK3C3Q8NEB9 887 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 OR5M3Q8NGP4 307 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 E2F7Q96AV8 911 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 SOX7Q9BT81 388 aa4.19□□□□□ -1.74
USP12-203ENST00000620323 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.18□□□□□ -1.74
USP12-203ENST00000620323 LOC105371045A0A1W2PR82 267 aa4.18□□□□□ -1.74
USP12-203ENST00000620323 GAAP10253 952 aa4.18□□□□□ -1.74
USP12-203ENST00000620323 HOXB6P17509 224 aaKnown RBP4.18□□□□□ -1.74
USP12-203ENST00000620323 MRPL49Q13405 166 aaKnown RBP4.18□□□□□ -1.74
USP12-203ENST00000620323 TTC38Q5R3I4 469 aa4.18□□□□□ -1.74
USP12-203ENST00000620323 BTNL9Q6UXG8 535 aa4.18□□□□□ -1.74
USP12-203ENST00000620323 DOK3Q7L591 496 aa4.18□□□□□ -1.74
USP12-203ENST00000620323 C2orf69Q8N8R5 385 aa4.18□□□□□ -1.74
USP12-203ENST00000620323 IL17RAQ96F46 866 aa4.18□□□□□ -1.74
USP12-203ENST00000620323 DNAJC2Q99543 621 aaKnown RBP4.18□□□□□ -1.74
USP12-203ENST00000620323 NDOR1Q9UHB4 597 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms