RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 HAUS6Q7Z4H7 955 aa21.55■■□□□ 1.04
CIRBP-220ENST00000588917 TMEM161BQ8NDZ6 487 aa21.55■■□□□ 1.04
CIRBP-220ENST00000588917 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.55■■□□□ 1.042e-15■■■□□ 14.8
CIRBP-220ENST00000588917 BLZF1Q9H2G9 400 aa21.55■■□□□ 1.04
CIRBP-220ENST00000588917 MINDY3Q9H8M7 445 aa21.55■■□□□ 1.04
CIRBP-220ENST00000588917 MRPL44Q9H9J2 332 aaKnown RBP21.55■■□□□ 1.04
CIRBP-220ENST00000588917 DENND3A2RUS2 1198 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 ACKR2O00590 384 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 CSDE1O75534 798 aaKnown RBP21.54■■□□□ 1.04
CIRBP-220ENST00000588917 MCM4P33991 863 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 SMAD3P84022 425 aaKnown RBP21.54■■□□□ 1.04
CIRBP-220ENST00000588917 ZNF720Q7Z2F6 126 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 SFR1Q86XK3 245 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 GRAMD1CQ8IYS0 662 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 HERVK_113Q902F9 699 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 HVCN1Q96D96 273 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 VWCEQ96DN2 955 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 GTPBP4Q9BZE4 634 aaKnown RBP21.54■■□□□ 1.04
CIRBP-220ENST00000588917 OSBPL7Q9BZF2 842 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 C1orf112Q9NSG2 853 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 LTBP2Q14767 1821 aa21.54■■□□□ 1.04
CIRBP-220ENST00000588917 ENPP3O14638 875 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 MBD3O95983 291 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 RPN1P04843 607 aaKnown RBP21.53■■□□□ 1.04
CIRBP-220ENST00000588917 PRKCBP05771 671 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 EPHB4P54760 987 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 GTF2BQ00403 316 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 DPYDQ12882 1025 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 COASYQ13057 564 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 PRPF4BQ13523 1007 aaKnown RBP21.53■■□□□ 1.04
CIRBP-220ENST00000588917 NOTUMQ6P988 496 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 OTOP2Q7RTS6 562 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 CCDC51Q96ER9 411 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 CCDC113Q9H0I3 377 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 SEMA6BQ9H3T3 888 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 AGPAT5Q9NUQ2 364 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 RMND1Q9NWS8 449 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 TANC1Q9C0D5 1861 aa21.53■■□□□ 1.04
CIRBP-220ENST00000588917 K7ENM7 598 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 SKIP12755 728 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 FGFR4P22455 802 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 KCNJ6P48051 423 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 TMEM132AQ24JP5 1023 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 APBB1IPQ7Z5R6 666 aaPredicted RBP21.52■■□□□ 1.04
CIRBP-220ENST00000588917 GSDMAQ96QA5 445 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 ADAM2Q99965 735 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 KIFC3Q9BVG8 833 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 TRAIPQ9BWF2 469 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 MRPL4Q9BYD3 311 aaKnown RBP21.52■■□□□ 1.04
CIRBP-220ENST00000588917 TSPYL2Q9H2G4 693 aaPredicted RBP21.52■■□□□ 1.04
CIRBP-220ENST00000588917 RGS18Q9NS28 235 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 EXOC1Q9NV70 894 aa21.52■■□□□ 1.04
CIRBP-220ENST00000588917 PIN4Q9Y237 131 aaKnown RBP21.52■■□□□ 1.04
CIRBP-220ENST00000588917 ADGRA3Q8IWK6 1321 aa21.52■■□□□ 1.03
CIRBP-220ENST00000588917 A0A1B0GUA9 196 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 ZBBXA8MT70 800 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 TSPAN1O60635 241 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 AMHP03971 560 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 CASP1P29466 404 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 NMT1P30419 496 aaKnown RBP21.51■■□□□ 1.03
CIRBP-220ENST00000588917 KCNB1Q14721 858 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 AMHR2Q16671 573 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 FAM26FQ5R3K3 315 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 SLC24A5Q71RS6 500 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 PHOSPHO2Q8TCD6 241 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 FIZ1Q96SL8 496 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 CDX2Q99626 313 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-220ENST00000588917 TMX1Q9H3N1 280 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 TBX20Q9UMR3 447 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 EXOC7Q9UPT5 735 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 SLC4A7Q9Y6M7 1214 aa21.51■■□□□ 1.03
CIRBP-220ENST00000588917 UNC80Q8N2C7 3258 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 N4BP3O15049 544 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 KLRC4O43908 158 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 GCNT3O95395 438 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 HOXA11P31270 313 aaPredicted RBP21.5■■□□□ 1.03
CIRBP-220ENST00000588917 EHHADHQ08426 723 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 DSC3Q14574 896 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 KMT5BQ4FZB7 885 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 TWF2Q6IBS0 349 aaKnown RBP21.5■■□□□ 1.03
CIRBP-220ENST00000588917 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.5■■□□□ 1.03
CIRBP-220ENST00000588917 SMARCE1Q969G3 411 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 RNPC3Q96LT9 517 aaKnown RBP21.5■■□□□ 1.03
CIRBP-220ENST00000588917 ADPGKQ9BRR6 497 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 TMEM206Q9H813 350 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 CNTNAP2Q9UHC6 1331 aa21.5■■□□□ 1.03
CIRBP-220ENST00000588917 RHOBTB3O94955 611 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 KIF20AO95235 890 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 ARF4P18085 180 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-220ENST00000588917 RAB27AP51159 221 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 PNOCQ13519 176 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 SLC27A1Q6PCB7 646 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 ZPBP2Q6X784 338 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 RTN4RL1Q86UN2 441 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-220ENST00000588917 ACCSQ96QU6 501 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 STRA6Q9BX79 667 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 TBC1D7Q9P0N9 293 aa21.49■■□□□ 1.03
CIRBP-220ENST00000588917 A0A0U1RQF3 1178 aa21.48■■□□□ 1.03
CIRBP-220ENST00000588917 EIF3DO15371 548 aaKnown RBP eCLIP21.48■■□□□ 1.03
CIRBP-220ENST00000588917 EOMESO95936 686 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms